HHsearch results for GI: 254780539 and protein with PDBid: 2qi9_A
>2qi9_A Vitamin B12 import system permease protein BTUC; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_A*
Probab=99.87 E-value=3.9e-20 Score=131.08 Aligned_cols=244 Identities=14% Similarity=0.168 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999877799999965899632--------4899999999999831441------4568999999999999863
Q gi|254780539|r 18 IWMSTLIGCVCGLLSAYLILKGWSSIGN--------GISHAIFPGIVVCHRLNIP------LSVGATISGMLATGIMVKI 83 (273)
Q Consensus 18 ll~~~li~~~~~~lG~~~v~r~~s~~~~--------alsH~~l~Giala~~l~~~------~~~ga~~~~ll~~~li~~l 83 (273)
.+++.++|...+.-|... |+...+ ++++.+-.|++++..++.. ....++.++..........
T Consensus 60 ~l~a~l~Ga~LavsG~~l----Q~~~rNpLA~P~iLGissGA~lg~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 135 (326)
T 2qi9_A 60 TLAVLLVGAALAISGAVM----QALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLSAIAGALIITLILLRF 135 (326)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHHTTCSSCCGGGGTHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHCCCCCCCCHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999----9995798878402222016999999999963026789999999999999999999988
Q ss_pred HCCCCCCHH--HHHHHHHHHHHHHHHHH-HHHH-CC-CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 102465115--68999999999999997-5211-02-2242112115310027000135788767999999998887888
Q gi|254780539|r 84 KETTKLRED--VAIAVVYIIFYSFAMFM-LSLS-PS-AVYVENIFLGNTLSMSRSDTIQVLIITFSVACIVYMKWKDFVL 158 (273)
Q Consensus 84 ~~~~~~~~d--~~igi~~~~~~algvll-is~~-~~-~~~l~~~LfG~il~i~~~di~~~~~~~~i~~~~~~~~~r~l~~ 158 (273)
.++ +.+.. ...|+..+..++....+ .... +. ..++..|+.|+....+|+|++...+..... .......|+++.
T Consensus 136 ~~~-~~~~~~liL~Gi~i~~~~~a~~~~l~~~~~~~~~~~~~~w~~Gs~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~ 213 (326)
T 2qi9_A 136 ARR-HLSTSRLLLAGVALGIISSALMTWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVL-LWISSQSRPMNM 213 (326)
T ss_dssp HTT-CCCHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHTCCCTTCCGGGHHHHTTTHHHH-HHHTTCHHHHHH
T ss_pred HCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_conf 535-565058899999999999999999998168999999999973477788746778899999999-999999988777
Q ss_pred HHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 72468899871787104677999999999999999989999999999999999852089899999999999999999999
Q gi|254780539|r 159 LFFDERHAHSVGINVKLLKMLFFSLLTITIVIGFQTVGILLVIATVITPGATAKLMSKSFGTYLVSSSLLGATSSFLGSY 238 (273)
Q Consensus 159 ~sfD~~~A~~~Gi~v~~~~~l~l~l~al~v~~~v~~vG~llv~allv~Paa~A~~~~~~~~~~~~~s~~~g~~~~~~G~~ 238 (273)
.+.|||.|++.|+|+++.+...+.+.++.++.++..+|.+-+.++ +.|+.+.+..++++|+.++.|.++|.........
T Consensus 214 l~lG~~~A~sLGv~v~~~r~~~l~~~~ll~a~~va~~G~I~FvGL-i~PhiaR~~~g~~~~~~l~~s~l~Ga~lll~aD~ 292 (326)
T 2qi9_A 214 LALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGL-VIPHILRLSGLTDHRVLLPGCALAGASALLLADI 292 (326)
T ss_dssp HHTCHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSSTT-HHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 636849888679858998899886889999999985156999999-8999999862777436999999999999999999
Q ss_pred HHHH----HCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999----579818999999999999999980424
Q gi|254780539|r 239 ISYF----LDCSPGGIIVIIETSLFLLCLFFFSKQ 269 (273)
Q Consensus 239 lS~~----~~lp~g~~Iv~~~~~~f~~~~~~~~~~ 269 (273)
++.. .++|.|-. ..+.|..|++.++..++|
T Consensus 293 i~r~i~~p~eiPvGvi-taliG~P~fi~Ll~r~~R 326 (326)
T 2qi9_A 293 VARLALAAAELPIGVV-TATLGAPVFIWLLLKAGR 326 (326)
T ss_dssp HHHSSSTTCCCCHHHH-HHHHHHHHHHHHHSCC--
T ss_pred HHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHHCCC
T ss_conf 9966146654219999-999999999997720479