HHsearch results for GI: 254780539 and protein with PDBid: 2qi9_A

>2qi9_A Vitamin B12 import system permease protein BTUC; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_A*
Probab=99.87  E-value=3.9e-20  Score=131.08  Aligned_cols=244  Identities=14%  Similarity=0.168  Sum_probs=172.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999877799999965899632--------4899999999999831441------4568999999999999863
Q gi|254780539|r   18 IWMSTLIGCVCGLLSAYLILKGWSSIGN--------GISHAIFPGIVVCHRLNIP------LSVGATISGMLATGIMVKI   83 (273)
Q Consensus        18 ll~~~li~~~~~~lG~~~v~r~~s~~~~--------alsH~~l~Giala~~l~~~------~~~ga~~~~ll~~~li~~l   83 (273)
                      .+++.++|...+.-|...    |+...+        ++++.+-.|++++..++..      ....++.++..........
T Consensus        60 ~l~a~l~Ga~LavsG~~l----Q~~~rNpLA~P~iLGissGA~lg~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  135 (326)
T 2qi9_A           60 TLAVLLVGAALAISGAVM----QALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLSAIAGALIITLILLRF  135 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHH----HHHTTCSSCCGGGGTHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH----HHHHCCCCCCCCHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999----9995798878402222016999999999963026789999999999999999999988


Q ss_pred             HCCCCCCHH--HHHHHHHHHHHHHHHHH-HHHH-CC-CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             102465115--68999999999999997-5211-02-2242112115310027000135788767999999998887888
Q gi|254780539|r   84 KETTKLRED--VAIAVVYIIFYSFAMFM-LSLS-PS-AVYVENIFLGNTLSMSRSDTIQVLIITFSVACIVYMKWKDFVL  158 (273)
Q Consensus        84 ~~~~~~~~d--~~igi~~~~~~algvll-is~~-~~-~~~l~~~LfG~il~i~~~di~~~~~~~~i~~~~~~~~~r~l~~  158 (273)
                      .++ +.+..  ...|+..+..++....+ .... +. ..++..|+.|+....+|+|++...+..... .......|+++.
T Consensus       136 ~~~-~~~~~~liL~Gi~i~~~~~a~~~~l~~~~~~~~~~~~~~w~~Gs~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~  213 (326)
T 2qi9_A          136 ARR-HLSTSRLLLAGVALGIISSALMTWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVL-LWISSQSRPMNM  213 (326)
T ss_dssp             HTT-CCCHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHTCCCTTCCGGGHHHHTTTHHHH-HHHTTCHHHHHH
T ss_pred             HCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_conf             535-565058899999999999999999998168999999999973477788746778899999999-999999988777


Q ss_pred             HHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             72468899871787104677999999999999999989999999999999999852089899999999999999999999
Q gi|254780539|r  159 LFFDERHAHSVGINVKLLKMLFFSLLTITIVIGFQTVGILLVIATVITPGATAKLMSKSFGTYLVSSSLLGATSSFLGSY  238 (273)
Q Consensus       159 ~sfD~~~A~~~Gi~v~~~~~l~l~l~al~v~~~v~~vG~llv~allv~Paa~A~~~~~~~~~~~~~s~~~g~~~~~~G~~  238 (273)
                      .+.|||.|++.|+|+++.+...+.+.++.++.++..+|.+-+.++ +.|+.+.+..++++|+.++.|.++|.........
T Consensus       214 l~lG~~~A~sLGv~v~~~r~~~l~~~~ll~a~~va~~G~I~FvGL-i~PhiaR~~~g~~~~~~l~~s~l~Ga~lll~aD~  292 (326)
T 2qi9_A          214 LALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGL-VIPHILRLSGLTDHRVLLPGCALAGASALLLADI  292 (326)
T ss_dssp             HHTCHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSSTT-HHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             636849888679858998899886889999999985156999999-8999999862777436999999999999999999


Q ss_pred             HHHH----HCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             9999----579818999999999999999980424
Q gi|254780539|r  239 ISYF----LDCSPGGIIVIIETSLFLLCLFFFSKQ  269 (273)
Q Consensus       239 lS~~----~~lp~g~~Iv~~~~~~f~~~~~~~~~~  269 (273)
                      ++..    .++|.|-. ..+.|..|++.++..++|
T Consensus       293 i~r~i~~p~eiPvGvi-taliG~P~fi~Ll~r~~R  326 (326)
T 2qi9_A          293 VARLALAAAELPIGVV-TATLGAPVFIWLLLKAGR  326 (326)
T ss_dssp             HHHSSSTTCCCCHHHH-HHHHHHHHHHHHHSCC--
T ss_pred             HHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHHCCC
T ss_conf             9966146654219999-999999999997720479