HHsearch alignment for GI: 254780540 and conserved domain: PRK03784

>PRK03784 vtamin B12-transporter permease; Provisional.
Probab=99.91  E-value=1.4e-21  Score=134.45  Aligned_cols=242  Identities=12%  Similarity=0.144  Sum_probs=184.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             99999999998788999999-76899644---5899999999999972211------33458899999999997312334
Q gi|254780540|r   21 FIITVIVVIPMSVLSCFIIL-KNQSFAGE---AISHSVLPGIVLSHMAGIP------LEIGAFIAGMICTLSAGYLKEKS   90 (277)
Q Consensus        21 ll~~~l~~~~~~~lG~~vv~-rr~~~~~~---alsH~al~Gial~~l~g~~------~~lga~~~~ll~a~li~~l~~r~   90 (277)
T Consensus        61 ~l~a~l~Ga~LavsG~llQ~l~rNpLA~P~iLGissGA~l~~~~~~~~~~~~~~~~~~~~~a~~gal~~~~l~~~~~~~~  140 (330)
T PRK03784         61 TLAVLLVGAALAVSGAVMQALFENPLAEPGLLGVSNGAGVALVAAVLLGQGLLPGWALSLCAIAGALIITLILLRFARRH  140 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999999999999947988898503588999999999999987677799999999999999999999999547


Q ss_pred             CCCHH--HHHHHHHHHHHHHHHHHHHHCCCC---CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             43024--478989999999999863210244---1034577631753466552578998899999999863343113466
Q gi|254780540|r   91 YFQED--LVLSIVFSGMFAIGIILILKVHSS---LHFSHILLGDMLGISKSDIITTAFFAFISISFLILKKNDLLLMIFD  165 (277)
Q Consensus        91 ~~~~d--~~igiv~~~~~algill~s~~~~~---~~l~~~LfG~il~v~~~dv~~~~i~~~~~l~~~~~~~r~l~~~sfD  165 (277)
T Consensus       141 ~~~~~~liL~Giais~~~~a~~~~l~~~~~~~~~~~~~~Wl~Gsl~~~~w~~~~~~~~~~~~-~~~~~~~~r~L~~L~LG  219 (330)
T PRK03784        141 RLSTARLLLAGVALGIICSALMTWAVYFSTSLDLRQLMYWMMGGFGGVDWRQSWLMLALLPV-LIWLCCQGRPLNMLALG  219 (330)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHCHHHHCC
T ss_conf             98815899999999999999999999958999999999997265457988899999999999-99999998656042179


Q ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88997618874235669999999999999989899999999998778998530888999999999999999999999999
Q gi|254780540|r  166 PMHAHSMQIPIKLLHYNFLIVLSLIIVISLKSIGIILPPAVLVLPGATAFLLSKHHTTMILLSVIISVVCTLVGIYISFF  245 (277)
Q Consensus       166 ~~~A~~~Gi~v~~~~~~~~~lial~v~~~v~~vG~llv~alli~Paa~A~~~s~s~~~~i~~s~~ig~~~~~~G~~lS~~  245 (277)
T Consensus       220 d~~A~~LGv~v~~~r~~~l~~a~ll~a~~Va~~G~IgFVGL-i~PhiaR~l~g~~~~~llp~sal~Ga~lll~aD~~~R~  298 (330)
T PRK03784        220 ETSARQLGLPLWFWRNLLVLATGWLVGVSVALAGAIGFIGL-VIPHILRLCGLTDHRVLLPGCALAGASLLLLADIVARL  298 (330)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             48898789989999999999999999999993115873996-29999999807775059999999999999999999856


Q ss_pred             ----HCCCCHHHHHHHHHHHHHH
Q ss_conf             ----5788189999999999999
Q gi|254780540|r  246 ----INSAAAPTVVILMAIFFVV  264 (277)
Q Consensus       246 ----~~~p~g~~Iv~~~~~~~~~  264 (277)
T Consensus       299 l~~p~elPvGivtaliG~P~fi~  321 (330)
T PRK03784        299 ALASAELPIGVVTATLGAPVFIW  321 (330)
T ss_pred             HCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             25666520999999998999999