HHsearch alignment for GI: 254780540 and conserved domain: PRK09478

Probab=95.25  E-value=0.16  Score=26.27  Aligned_cols=114  Identities=11%  Similarity=0.094  Sum_probs=63.4

Q ss_pred             HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             86334311346688997618874235669999999999999989899999999998778998530888999999999999
Q gi|254780540|r  154 LKKNDLLLMIFDPMHAHSMQIPIKLLHYNFLIVLSLIIVISLKSIGIILPPAVLVLPGATAFLLSKHHTTMILLSVIISV  233 (277)
Q Consensus       154 ~~~r~l~~~sfD~~~A~~~Gi~v~~~~~~~~~lial~v~~~v~~vG~llv~alli~Paa~A~~~s~s~~~~i~~s~~ig~  233 (277)
T Consensus       205 ~~Gr~lyAvG~N~~AA~~sGI~v~r~~i~~y~lsG~~aala----Gil~~-~r~--~s~-~~~~G~~~el~aIaAvviGG  276 (336)
T PRK09478        205 RFGKNIFAIGGNPEAAKVSGVNVALNLLMIYALSGVFYAFG----GMLEA-GRI--GSA-TNNLGFMYELDAIAACVVGG  276 (336)
T ss_pred             HHHEEEEECCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHH----HHHHH-HHH--CCC-CCCCCCCHHHHHHHHHHHCC
T ss_conf             54336346459899998828984013308998889999999----99999-984--883-82657534789999999756


Q ss_pred             HHH----------HHHHHH-H------HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             999----------999999-9------995788189999999999999999999602337
Q gi|254780540|r  234 VCT----------LVGIYI-S------FFINSAAAPTVVILMAIFFVVVYAYSIIINKRT  276 (277)
Q Consensus       234 ~~~----------~~G~~l-S------~~~~~p~g~~Iv~~~~~~~~~~~~~~~l~~rr~  276 (277)
T Consensus       277 tsl~GG~Gsv~Gt~~G~l~l~~i~ngl~llgv~~~~q~iv~G-~ili~aV~ld~~~~~rk  335 (336)
T PRK09478        277 VSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKG-GIIIFAVALDSLKYARK  335 (336)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHC
T ss_conf             587799657699999999999999999982998899999999-99999999999999727