HHsearch alignment for GI: 254780540 and conserved domain: PRK09512

>PRK09512 rbsC ribose ABC transporter permease protein; Reviewed.
Probab=95.87  E-value=0.096  Score=27.53  Aligned_cols=120  Identities=11%  Similarity=0.099  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHHH----HHCCCCCCCCHHHHHHHHHHHHHHHHHHHH-H-HCCCC---CH-HHHH---HHHHHHHCCHHHH
Q ss_conf             889999999999----731233443024478989999999999863-2-10244---10-3457---7631753466552
Q gi|254780540|r   72 AFIAGMICTLSA----GYLKEKSYFQEDLVLSIVFSGMFAIGIILI-L-KVHSS---LH-FSHI---LLGDMLGISKSDI  138 (277)
Q Consensus        72 a~~~~ll~a~li----~~l~~r~~~~~d~~igiv~~~~~algill~-s-~~~~~---~~-l~~~---LfG~il~v~~~dv  138 (277)
T Consensus       100 ai~~~l~~G~~~G~iNG~lV~~~~ip~--~I~TLgt~~i~~Gl~~~~t~g~~i~~~~~~~~~~~~~~~~g~~~gip~~-~  176 (321)
T PRK09512        100 AVPAALALGAAIGAVTGVIVAKGKVQA--FIATLVMMLLLRGVTMVYTDGSPINTGFTDNADLFGWFGIGRPLGVPTP-V  176 (321)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHH-H
T ss_conf             999999999999999858776336777--9999999999999999982992124677643589999743651565699-9


Q ss_pred             HHHHHHHHHHHHHH--HHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             57899889999999--986334311346688997618874235669999999999999
Q gi|254780540|r  139 ITTAFFAFISISFL--ILKKNDLLLMIFDPMHAHSMQIPIKLLHYNFLIVLSLIIVIS  194 (277)
Q Consensus       139 ~~~~i~~~~~l~~~--~~~~r~l~~~sfD~~~A~~~Gi~v~~~~~~~~~lial~v~~~  194 (277)
T Consensus       177 ~i~i~v~ii~~~~l~~T~~Gr~lyAiG~N~~AA~~sGI~v~r~~i~~f~lsg~lagla  234 (321)
T PRK09512        177 WIMAIVFAAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLAALA  234 (321)
T ss_pred             HHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
T ss_conf             9999999999999986688748879779899999809885148874799999999999