HHsearch alignment for GI: 254780540 and conserved domain: PRK09535
>PRK09535 btuC corrinoid ABC transporter permease; Reviewed.
Probab=99.93 E-value=2e-22 Score=139.01 Aligned_cols=245 Identities=15% Similarity=0.208 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHH---HHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999998788999999-7689964---4589999999999997221----13345889999999999731233443
Q gi|254780540|r 21 FIITVIVVIPMSVLSCFIIL-KNQSFAG---EAISHSVLPGIVLSHMAGI----PLEIGAFIAGMICTLSAGYLKEKSYF 92 (277)
Q Consensus 21 ll~~~l~~~~~~~lG~~vv~-rr~~~~~---~alsH~al~Gial~~l~g~----~~~lga~~~~ll~a~li~~l~~r~~~ 92 (277)
T Consensus 99 ~l~A~lvGaaLavaG~lmQ~l~RNPLAdP~iLGVssGA~lga~~~i~l~~~~~~~~~~~af~gal~~~~~v~~l~~~~g~ 178 (366)
T PRK09535 99 ILLGATVGFSLAIAGAVMQGFFRNPMADPSIIGVSSGAAVGAVAFIVLPLVVPFGLQAAAFAGALIAAFTVYLIATRNGR 178 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999728888697287999999999999999988888999999999999999999999980688
Q ss_pred C-HH--HHHHHHHHHHHHHHHHHH-HHC-CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 0-24--478989999999999863-210-244103457763175346655257899889999999986334311346688
Q gi|254780540|r 93 Q-ED--LVLSIVFSGMFAIGIILI-LKV-HSSLHFSHILLGDMLGISKSDIITTAFFAFISISFLILKKNDLLLMIFDPM 167 (277)
Q Consensus 93 ~-~d--~~igiv~~~~~algill~-s~~-~~~~~l~~~LfG~il~v~~~dv~~~~i~~~~~l~~~~~~~r~l~~~sfD~~ 167 (277)
T Consensus 179 ~~~~~LiL~Giavs~~~~Al~~~l~~~~~~~~~~~~~Wl~Gsl~~~~w~~v~~~~~~~~i~~~~~~~~~r~L~~L~lGde 258 (366)
T PRK09535 179 TPTATLLLAGVAVQTFLGAVISFLLLHSGESIRRAVYWLMGHLHGSTWGDVRAALPVVVVGFVVLLAYARDLNVLLLGEE 258 (366)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHH
T ss_conf 87599999999999999999999997481768999999977157898889999999999999999999996420213959
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH--H
Q ss_conf 99761887423566999999999999998989999999999877899853088899999999999999999999999--9
Q gi|254780540|r 168 HAHSMQIPIKLLHYNFLIVLSLIIVISLKSIGIILPPAVLVLPGATAFLLSKHHTTMILLSVIISVVCTLVGIYISF--F 245 (277)
Q Consensus 168 ~A~~~Gi~v~~~~~~~~~lial~v~~~v~~vG~llv~alli~Paa~A~~~s~s~~~~i~~s~~ig~~~~~~G~~lS~--~ 245 (277)
T Consensus 259 ~A~sLGvnv~~~r~~~l~la~llta~~Va~~G~IgFVGL-i~PHiaR~l~g~~~r~llp~saL~Ga~lll~aD~laR~~p 337 (366)
T PRK09535 259 DAHTLGIEVERTKRILLAAASVVTAAAVAVAGVIGFVGL-IVPHAMRLLVGPDHRILLPTSALAGASFLVATDTVARSGA 337 (366)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 998789988999999999999999999993341646986-0899999992888434999999999999999999756486
Q ss_pred HCCCCHHHHHHHHHHHHHHHH
Q ss_conf 578818999999999999999
Q gi|254780540|r 246 INSAAAPTVVILMAIFFVVVY 266 (277)
Q Consensus 246 ~~~p~g~~Iv~~~~~~~~~~~ 266 (277)
T Consensus 338 ~ElPvGivtalIG~P~fl~LL 358 (366)
T PRK09535 338 TEPPVGIITAALGAPFFLYLL 358 (366)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
T ss_conf 445499999999899999999