HHsearch alignment for GI: 254780540 and conserved domain: PRK11285

>PRK11285 araH L-arabinose transporter permease protein; Provisional.
Probab=96.98  E-value=0.019  Score=31.37  Aligned_cols=118  Identities=11%  Similarity=0.123  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHC-CC---CCHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             89999999999731233443024478989999999999863-210-24---41034577631753466552578998899
Q gi|254780540|r   73 FIAGMICTLSAGYLKEKSYFQEDLVLSIVFSGMFAIGIILI-LKV-HS---SLHFSHILLGDMLGISKSDIITTAFFAFI  147 (277)
Q Consensus        73 ~~~~ll~a~li~~l~~r~~~~~d~~igiv~~~~~algill~-s~~-~~---~~~l~~~LfG~il~v~~~dv~~~~i~~~~  147 (277)
T Consensus       115 l~~G~~~G~iNG~lv~~~~ip~--fI~TLgt~~i~~Gl~~~~t~g~~i~~~~~~~~~~~~~~~~gip~~~-~i~ii~~~~  191 (327)
T PRK11285        115 LLAGAAVGLVNGFVIARLRINA--LITTLATMQIVRGLAYIISDGKAVGISDERFFALGYASFFGVPAPI-WLTVACFVV  191 (327)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHHHHEECCCEEECCCCHHHHHHHCCCCCCCCHHH-HHHHHHHHH
T ss_conf             9999999999838676107857--9999999999998785332884325588899985138423754899-999999999


Q ss_pred             HHHH--HHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             9999--998633431134668899761887423566999999999999
Q gi|254780540|r  148 SISF--LILKKNDLLLMIFDPMHAHSMQIPIKLLHYNFLIVLSLIIVI  193 (277)
Q Consensus       148 ~l~~--~~~~~r~l~~~sfD~~~A~~~Gi~v~~~~~~~~~lial~v~~  193 (277)
T Consensus       192 ~~~~l~~T~~Gr~lyAvG~N~~AA~~sGI~v~r~~i~ay~isG~lagl  239 (327)
T PRK11285        192 FGFLLNKTVFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLQGLVSAL  239 (327)
T ss_pred             HHHHHHHCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf             999996340545998816989999881898337401999999999999