>cd06582 TM_PBP1_LivH_like Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transpo

Probab=96.15  E-value=0.07  Score=28.25  Aligned_cols=40  Identities=8%  Similarity=0.054  Sum_probs=33.8

Q ss_pred             HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             6334311346688997618874235669999999999999
Q gi|254780540|r  155 KKNDLLLMIFDPMHAHSMQIPIKLLHYNFLIVLSLIIVIS  194 (277)
Q Consensus       155 ~~r~l~~~sfD~~~A~~~Gi~v~~~~~~~~~lial~v~~~  194 (277)
T Consensus       153 ~Gr~l~Ai~~n~~aA~~~Ginv~r~k~~af~isg~lagla  192 (272)
T cd06582         153 LGRAIRAVAQNPEAARLLGINVRRVFALTFALGAALAGLA  192 (272)
T ss_pred             CCHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             0456847633989998859988898799989999999999