HHsearch alignment of GI: 254780540 and MMDB domain: 2nq2_A_94-261
>2nq2_A (A:94-261) Hypothetical ABC transporter permease protein HI1471; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=99.73 E-value=1.9e-16 Score=106.41 Aligned_cols=153 Identities=13% Similarity=0.153 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHCCC-CCCCC--HHHHHHHHHHHHHHHHHHHHHHC--CC--
Q ss_conf 58999999999999722113---34588999999999973123-34430--24478989999999999863210--24--
Q gi|254780540|r 49 AISHSVLPGIVLSHMAGIPL---EIGAFIAGMICTLSAGYLKE-KSYFQ--EDLVLSIVFSGMFAIGIILILKV--HS-- 118 (277)
Q Consensus 49 alsH~al~Gial~~l~g~~~---~lga~~~~ll~a~li~~l~~-r~~~~--~d~~igiv~~~~~algill~s~~--~~-- 118 (277)
+++|.+..|++++..+..+. ...++..+...+..+.++.+ |++.+ +....|+..+..+.....++... +.
T Consensus 5 Gvs~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liL~Gi~i~~~~~a~~~~l~~~~~~~~~ 84 (168)
T 2nq2_A 5 GVTSGSAFGGTLAIFFGFSLYGLFTSTILFGFGTLALVFLFSFKFNQRSLLMLILIGMILSGLFSALVSLLQYISDTEEK 84 (168)
T ss_dssp SHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHTC----CHHHHHHHHHHHHHHHHHHHHHHHHSSCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCHHHH
T ss_conf 87689999999999876226667899999989999999999997078884111100278999999999999997030779
Q ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 41034577631753466552578998899999999863343113466889976188742356699999999999999898
Q gi|254780540|r 119 SLHFSHILLGDMLGISKSDIITTAFFAFISISFLILKKNDLLLMIFDPMHAHSMQIPIKLLHYNFLIVLSLIIVISLKSI 198 (277)
Q Consensus 119 ~~~l~~~LfG~il~v~~~dv~~~~i~~~~~l~~~~~~~r~l~~~sfD~~~A~~~Gi~v~~~~~~~~~lial~v~~~v~~v 198 (277)
..+++.|++||...++|+|++...+...+........+|+++..++|||.|++.|+|+++.++..+.+.++.++.++..+
T Consensus 85 ~~~~~~wl~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~lg~~~A~slGv~v~~~~~~~l~~~~ll~a~~va~v 164 (168)
T 2nq2_A 85 LPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAIS 164 (168)
T ss_dssp HHHHHHHTTCCSTTCCHHHHHHHHHHHHHHHHHHHHTTTGGGGGGSCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999986124357883213432433047988888765525543179699845678778999999999999999998512
Q ss_pred HHH
Q ss_conf 999
Q gi|254780540|r 199 GII 201 (277)
Q Consensus 199 G~l 201 (277)
|.+
T Consensus 165 G~I 167 (168)
T 2nq2_A 165 GSI 167 (168)
T ss_dssp CCC
T ss_pred CHH
T ss_conf 237