HHsearch results for GI: 254780540 and protein with PDBid: 2qi9_A
>2qi9_A Vitamin B12 import system permease protein BTUC; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_A*
Probab=99.87 E-value=1.2e-20 Score=128.30 Aligned_cols=242 Identities=10% Similarity=0.128 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHH---HHHHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999998788999999-7689964---45899999999999972211------33458899999999997312334
Q gi|254780540|r 21 FIITVIVVIPMSVLSCFIIL-KNQSFAG---EAISHSVLPGIVLSHMAGIP------LEIGAFIAGMICTLSAGYLKEKS 90 (277)
Q Consensus 21 ll~~~l~~~~~~~lG~~vv~-rr~~~~~---~alsH~al~Gial~~l~g~~------~~lga~~~~ll~a~li~~l~~r~ 90 (277)
.+++.++|...+.-|..... -|..+.+ -++++.+..|++++..++.. ....++..+...........++.
T Consensus 60 ~l~a~l~Ga~LavsG~~lQ~~~rNpLA~P~iLGissGA~lg~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 139 (326)
T 2qi9_A 60 TLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLSAIAGALIITLILLRFARRH 139 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSCCGGGGTHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999957988784022220169999999999630267899999999999999999999885355
Q ss_pred CCCHH-HHHHHHHHHHHHHHHHHHHHC-C-C-CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 43024-478989999999999863210-2-4-410345776317534665525789988999999998633431134668
Q gi|254780540|r 91 YFQED-LVLSIVFSGMFAIGIILILKV-H-S-SLHFSHILLGDMLGISKSDIITTAFFAFISISFLILKKNDLLLMIFDP 166 (277)
Q Consensus 91 ~~~~d-~~igiv~~~~~algill~s~~-~-~-~~~l~~~LfG~il~v~~~dv~~~~i~~~~~l~~~~~~~r~l~~~sfD~ 166 (277)
..... ...|+..+..+.....+.... + . ..++..|+.|+....+|+|++........ ......+.|+++.++.||
T Consensus 140 ~~~~~liL~Gi~i~~~~~a~~~~l~~~~~~~~~~~~~~w~~Gs~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~l~lG~ 218 (326)
T 2qi9_A 140 LSTSRLLLAGVALGIISSALMTWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPV-LLWISSQSRPMNMLALGE 218 (326)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHTCCCTTCCGGGHHHHTTTHHH-HHHHTTCHHHHHHHHTCH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCH
T ss_conf 6505889999999999999999999816899999999997347778874677889999999-999999998877763684
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH--
Q ss_conf 899761887423566999999999999998989999999999877899853088899999999999999999999999--
Q gi|254780540|r 167 MHAHSMQIPIKLLHYNFLIVLSLIIVISLKSIGIILPPAVLVLPGATAFLLSKHHTTMILLSVIISVVCTLVGIYISF-- 244 (277)
Q Consensus 167 ~~A~~~Gi~v~~~~~~~~~lial~v~~~v~~vG~llv~alli~Paa~A~~~s~s~~~~i~~s~~ig~~~~~~G~~lS~-- 244 (277)
|.|+..|+|+++.+...+.+.++.++.++..+|.+.+.++ +.|+.+.+...+++++.++.|.++|..-....-.++-
T Consensus 219 ~~A~sLGv~v~~~r~~~l~~~~ll~a~~va~~G~I~FvGL-i~PhiaR~~~g~~~~~~l~~s~l~Ga~lll~aD~i~r~i 297 (326)
T 2qi9_A 219 ISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGL-VIPHILRLSGLTDHRVLLPGCALAGASALLLADIVARLA 297 (326)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSSTT-HHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9888679858998899886889999999985156999999-899999986277743699999999999999999999661
Q ss_pred --HHCCCCHHHHHHHHHHHHHH
Q ss_conf --95788189999999999999
Q gi|254780540|r 245 --FINSAAAPTVVILMAIFFVV 264 (277)
Q Consensus 245 --~~~~p~g~~Iv~~~~~~~~~ 264 (277)
..++|.|-.+.++.+.+|+.
T Consensus 298 ~~p~eiPvGvitaliG~P~fi~ 319 (326)
T 2qi9_A 298 LAAAELPIGVVTATLGAPVFIW 319 (326)
T ss_dssp STTCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHH
T ss_conf 4665421999999999999999