RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780540|ref|YP_003064953.1| ABC transporter, membrane spanning protein (iron transport) [Candidatus Liberibacter asiaticus str. psy62] (277 letters) >3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, ATP-binding, cytoplasm, hydrolase, membrane; 2.80A {Schizosaccharomyces pombe} (A:1-326) Length = 326 Score = 29.0 bits (64), Expect = 0.72 Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 7/117 (5%) Query: 124 HILLG---DMLGISKSDIITTAFFAFISISFLILKKNDLLLMIFDPMHAHSMQIPIKLLH 180 +L +M+G S+S TA FA +S + + P + QI + Sbjct: 152 LLLSNPPRNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQIMDVVTE 211 Query: 181 YN-FLIVLSLIIVISLKSIGIILPPAVLVL-PGATAFLLSKHHTTMILLSVIISVVC 235 + V + + G + +++ PG L+ + + + V+ Sbjct: 212 MGKYTEVKTAFGIKDSVPKGAKIDAQIVIGTPGTVMDLM--KRRQLDARDIKVFVLD 266 >1td4_A Head decoration protein; SHP, viral protein; 1.50A {Enterobacteria phage P21} (A:) Length = 115 Score = 25.7 bits (56), Expect = 7.2 Identities = 9/16 (56%), Positives = 12/16 (75%) Query: 41 KNQSFAGEAISHSVLP 56 K +FAG A+SH+ LP Sbjct: 100 KANAFAGSALSHAALP 115 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.333 0.146 0.415 Gapped Lambda K H 0.267 0.0607 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 1,974,621 Number of extensions: 83239 Number of successful extensions: 327 Number of sequences better than 10.0: 1 Number of HSP's gapped: 326 Number of HSP's successfully gapped: 34 Length of query: 277 Length of database: 4,956,049 Length adjustment: 87 Effective length of query: 190 Effective length of database: 2,015,014 Effective search space: 382852660 Effective search space used: 382852660 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.5 bits) S2: 54 (24.8 bits)