HHsearch results for GI: 254780544 and protein with PDBid: 1tuo_A

>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00  E-value=0  Score=632.91  Aligned_cols=433  Identities=23%  Similarity=0.342  Sum_probs=362.8

Q ss_pred             CCCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE-CC
Q ss_conf             96520-33586015506877889999999999999997237998389996687797999999999999789879996-26
Q gi|254780544|r    1 MKRRF-FGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFIL-GP   78 (448)
Q Consensus         1 m~r~l-FGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~-g~   78 (448)
                      |++.| |||+||||++|. +|||+++.++|+||++++..+ .+++|+||||+|++|++|++++++||+++|++|+++ |.
T Consensus         8 ~~~~i~FGT~GiRG~~~~-~lt~~~~~~~~~a~~~~l~~~-~~~~VvVG~DtR~ss~~l~~a~~~gl~a~G~~V~~~~G~   85 (464)
T 1tuo_A            8 MSAPIRFGTEGFRGVIAR-EFTFATLHRLAEAYGRHLLER-GGGLVVVGHDTRFLADAFARALSGHLAGMGLKVVLLKGP   85 (464)
T ss_dssp             CCCCCCCCSSSEEEEBTT-TBCHHHHHHHHHHHHHHHHHT-TCCEEEEEECSSTTHHHHHHHHHHHHHHHTCEEEEESSS
T ss_pred             CCCCCCCCCCCCCEECCC-CCCHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf             777877408871412387-659999999999999999872-959899996996449999999999999769979987897


Q ss_pred             CCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             78089999998719925898865477752012564036545678357899999961566433445433222111354256
Q gi|254780544|r   79 IPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHD  158 (448)
Q Consensus        79 ~ptP~l~~a~~~~~~~gGI~iTaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (448)
                      +|||+++|+++++++++||||||||||++|||+||++++|.++.++.+++|+..+.........      ... ..+..+
T Consensus        86 ~pTP~l~~~v~~~~~~~gi~itaSHnp~~~ngiK~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~------~~~-~~~~~~  158 (464)
T 1tuo_A           86 VPTPLLSFAVRHLKAAGGAMLTASHNPPQYLGVKFKDATGGPIAQEEAKAIEALVPEEARALEG------AYE-TLDLRE  158 (464)
T ss_dssp             CCHHHHHHHHHHTTCSEEEEECCTTSCTTEEEEEEEETTTEECCHHHHHHHHHTCCSCCCCCCC------CCE-EECCHH
T ss_pred             CCHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC------CCE-ECCHHH
T ss_conf             7779999999836998448985689974755631034447767669999998631122320268------611-113166


Q ss_pred             HHHHHHHHCCCCH-HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC---CHHHHHHHHHC
Q ss_conf             6688776326310-211896699984466543333222123332222--22232223557744221---01377764200
Q gi|254780544|r  159 RYIEHVKRTLPRD-VTLQGLRIVVDCANGASYKVAPEVFWELGADVV--VIGDKPNGININLDCGS---TNVLSLQRKVH  232 (448)
Q Consensus       159 ~Yi~~l~~~~~~~-~~~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~--~i~~~pd~~~~~~~~~~---~~~~~l~~~v~  232 (448)
                      .|.+.+...++.. ....++++++||+||++..+++++|+.+++++.  .++..|++.|++.+|.+   .....+...++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  238 (464)
T 1tuo_A          159 AYFEALKAHLDLKALSGFSGVLYHDSMGGAGAGFLKGFLRHVGLEIPVRPIREEPHPLFHGVNPEPIPKNLGVTLAVLGP  238 (464)
T ss_dssp             HHHHHHHTTSCHHHHTTCCSCEEEECTTSTTTTHHHHHHHHTTCCCCEEEESCSCCTTGGGSCSCCSGGGCHHHHHHHTT
T ss_pred             HHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             66654201332222024660696034345420456899875165432355110688998988889641337999999877


Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             23430367531552100013322375533113567777655320022343332211360044432001211111233211
Q gi|254780544|r  233 EVRADIGIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDR  312 (448)
Q Consensus       233 ~~~ad~Gia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k  312 (448)
                      +.++|+|++|||||||++++|++|+++++|++++++++++++..  +...++.++.+|..++++++++|.++++|+||+|
T Consensus       239 ~~~adlgia~DgD~DR~~~vd~~g~~~~~d~i~~l~~~~~~~~~--~~~~~~~~~~~s~~~~~~~~~~g~~~~~t~~G~k  316 (464)
T 1tuo_A          239 ETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYRFRKG--HRGRAVKNFAVTWLLDRLGERLGFGVTTTPVGFK  316 (464)
T ss_dssp             CCTTCEEEEECTTSSBEEEEETTTEEECHHHHHHHHHHHHHHTT--CCSEEEEETTSCTHHHHHHHHHTCCEEEECSSHH
T ss_pred             HHCCEEEEEECCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHH
T ss_conf             51763777763788558999289808874999999999999747--6886430012577878999970873277334189


Q ss_pred             CHHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEE---EEEECCCCCCCCH
Q ss_conf             0111110289700134662365301000144423320246677755888899998656423000---0000567651155
Q gi|254780544|r  313 YIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKPVSTICHCFEEYPQFL---RSVSVKDTSILNS  389 (448)
Q Consensus       313 ~i~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~le~l~~~~~~l~~l~~~l~~~~~~~---~~~~~~~~~~~~~  389 (448)
                      |+++.|.+.++.||+|+|||++|+++.+++||++++++++++++.++++++++++.++.++...   .++.++.+.....
T Consensus       317 ~i~~~~~~~~~~~~~e~sg~~~~~~~~~~~D~i~~~l~il~~l~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  396 (464)
T 1tuo_A          317 WIKEEFLKGDCFIGGEESGGVGYPEHLPERDGILTSLLLLESVAATGKDLAEQFKEVEALTGLTHAYDRLDLPLKAPLDL  396 (464)
T ss_dssp             HHHHHHTTTCEEEEECTTSBEEETTTEEEECHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHTCCCEEEEEC---------
T ss_pred             HHHHHHHCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHH
T ss_conf             99999860894896526587534752557742779999999999829999999999898728762010014422226788


Q ss_pred             HHHHH--HHHHHH----HHCC------CCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf             89999--987655----4307------8865999677982279999615998999999999999987
Q gi|254780544|r  390 SSIVQ--AIADAE----SELR------GIDRLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVIP  444 (448)
Q Consensus       390 ~~i~~--~~~~~~----~~~~------~~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~i~  444 (448)
                      ..+.+  .+....    ..+|      +.+|++||||||||++|||+||.|++.+++++++++++|+
T Consensus       397 ~~~~~~~~~~~~~~~~i~~iDgv~~~~~~g~~lvRpSGTEp~vRvyaEa~~~e~a~~l~~~~~~lV~  463 (464)
T 1tuo_A          397 TPFREPRPLAGLTPKGVDTLDGVKWLYEEAWVLFRASGTEPVVRIYVEAQSPELVRALLEEARKLVE  463 (464)
T ss_dssp             ------CCCTTCCEEEEECSSSEEEEETTEEEEEECC-----CEEEEEESSHHHHHHHHHHHHTTTC
T ss_pred             HHHHCCHHHCCCCCCCEEECCEEEEECCCEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHCC
T ss_conf             8642405343676332450451899829989999822980068999985999999999999998709