HHsearch results for GI: 254780544 and protein with PDBid: 1tuo_A
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00 E-value=0 Score=632.91 Aligned_cols=433 Identities=23% Similarity=0.342 Sum_probs=362.8
Q ss_pred CCCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE-CC
Q ss_conf 96520-33586015506877889999999999999997237998389996687797999999999999789879996-26
Q gi|254780544|r 1 MKRRF-FGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFIL-GP 78 (448)
Q Consensus 1 m~r~l-FGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~-g~ 78 (448)
|++.| |||+||||++|. +|||+++.++|+||++++..+ .+++|+||||+|++|++|++++++||+++|++|+++ |.
T Consensus 8 ~~~~i~FGT~GiRG~~~~-~lt~~~~~~~~~a~~~~l~~~-~~~~VvVG~DtR~ss~~l~~a~~~gl~a~G~~V~~~~G~ 85 (464)
T 1tuo_A 8 MSAPIRFGTEGFRGVIAR-EFTFATLHRLAEAYGRHLLER-GGGLVVVGHDTRFLADAFARALSGHLAGMGLKVVLLKGP 85 (464)
T ss_dssp CCCCCCCCSSSEEEEBTT-TBCHHHHHHHHHHHHHHHHHT-TCCEEEEEECSSTTHHHHHHHHHHHHHHHTCEEEEESSS
T ss_pred CCCCCCCCCCCCCEECCC-CCCHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 777877408871412387-659999999999999999872-959899996996449999999999999769979987897
Q ss_pred CCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 78089999998719925898865477752012564036545678357899999961566433445433222111354256
Q gi|254780544|r 79 IPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHD 158 (448)
Q Consensus 79 ~ptP~l~~a~~~~~~~gGI~iTaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (448)
+|||+++|+++++++++||||||||||++|||+||++++|.++.++.+++|+..+......... ... ..+..+
T Consensus 86 ~pTP~l~~~v~~~~~~~gi~itaSHnp~~~ngiK~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~------~~~-~~~~~~ 158 (464)
T 1tuo_A 86 VPTPLLSFAVRHLKAAGGAMLTASHNPPQYLGVKFKDATGGPIAQEEAKAIEALVPEEARALEG------AYE-TLDLRE 158 (464)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCTTSCTTEEEEEEEETTTEECCHHHHHHHHHTCCSCCCCCCC------CCE-EECCHH
T ss_pred CCHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC------CCE-ECCHHH
T ss_conf 7779999999836998448985689974755631034447767669999998631122320268------611-113166
Q ss_pred HHHHHHHHCCCCH-HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC---CHHHHHHHHHC
Q ss_conf 6688776326310-211896699984466543333222123332222--22232223557744221---01377764200
Q gi|254780544|r 159 RYIEHVKRTLPRD-VTLQGLRIVVDCANGASYKVAPEVFWELGADVV--VIGDKPNGININLDCGS---TNVLSLQRKVH 232 (448)
Q Consensus 159 ~Yi~~l~~~~~~~-~~~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~--~i~~~pd~~~~~~~~~~---~~~~~l~~~v~ 232 (448)
.|.+.+...++.. ....++++++||+||++..+++++|+.+++++. .++..|++.|++.+|.+ .....+...++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 238 (464)
T 1tuo_A 159 AYFEALKAHLDLKALSGFSGVLYHDSMGGAGAGFLKGFLRHVGLEIPVRPIREEPHPLFHGVNPEPIPKNLGVTLAVLGP 238 (464)
T ss_dssp HHHHHHHTTSCHHHHTTCCSCEEEECTTSTTTTHHHHHHHHTTCCCCEEEESCSCCTTGGGSCSCCSGGGCHHHHHHHTT
T ss_pred HHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 66654201332222024660696034345420456899875165432355110688998988889641337999999877
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 23430367531552100013322375533113567777655320022343332211360044432001211111233211
Q gi|254780544|r 233 EVRADIGIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDR 312 (448)
Q Consensus 233 ~~~ad~Gia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k 312 (448)
+.++|+|++|||||||++++|++|+++++|++++++++++++.. +...++.++.+|..++++++++|.++++|+||+|
T Consensus 239 ~~~adlgia~DgD~DR~~~vd~~g~~~~~d~i~~l~~~~~~~~~--~~~~~~~~~~~s~~~~~~~~~~g~~~~~t~~G~k 316 (464)
T 1tuo_A 239 ETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYRFRKG--HRGRAVKNFAVTWLLDRLGERLGFGVTTTPVGFK 316 (464)
T ss_dssp CCTTCEEEEECTTSSBEEEEETTTEEECHHHHHHHHHHHHHHTT--CCSEEEEETTSCTHHHHHHHHHTCCEEEECSSHH
T ss_pred HHCCEEEEEECCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHH
T ss_conf 51763777763788558999289808874999999999999747--6886430012577878999970873277334189
Q ss_pred CHHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEE---EEEECCCCCCCCH
Q ss_conf 0111110289700134662365301000144423320246677755888899998656423000---0000567651155
Q gi|254780544|r 313 YIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKPVSTICHCFEEYPQFL---RSVSVKDTSILNS 389 (448)
Q Consensus 313 ~i~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~le~l~~~~~~l~~l~~~l~~~~~~~---~~~~~~~~~~~~~ 389 (448)
|+++.|.+.++.||+|+|||++|+++.+++||++++++++++++.++++++++++.++.++... .++.++.+.....
T Consensus 317 ~i~~~~~~~~~~~~~e~sg~~~~~~~~~~~D~i~~~l~il~~l~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 396 (464)
T 1tuo_A 317 WIKEEFLKGDCFIGGEESGGVGYPEHLPERDGILTSLLLLESVAATGKDLAEQFKEVEALTGLTHAYDRLDLPLKAPLDL 396 (464)
T ss_dssp HHHHHHTTTCEEEEECTTSBEEETTTEEEECHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHTCCCEEEEEC---------
T ss_pred HHHHHHHCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHH
T ss_conf 99999860894896526587534752557742779999999999829999999999898728762010014422226788
Q ss_pred HHHHH--HHHHHH----HHCC------CCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 89999--987655----4307------8865999677982279999615998999999999999987
Q gi|254780544|r 390 SSIVQ--AIADAE----SELR------GIDRLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVIP 444 (448)
Q Consensus 390 ~~i~~--~~~~~~----~~~~------~~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~i~ 444 (448)
..+.+ .+.... ..+| +.+|++||||||||++|||+||.|++.+++++++++++|+
T Consensus 397 ~~~~~~~~~~~~~~~~i~~iDgv~~~~~~g~~lvRpSGTEp~vRvyaEa~~~e~a~~l~~~~~~lV~ 463 (464)
T 1tuo_A 397 TPFREPRPLAGLTPKGVDTLDGVKWLYEEAWVLFRASGTEPVVRIYVEAQSPELVRALLEEARKLVE 463 (464)
T ss_dssp ------CCCTTCCEEEEECSSSEEEEETTEEEEEECC-----CEEEEEESSHHHHHHHHHHHHTTTC
T ss_pred HHHHCCHHHCCCCCCCEEECCEEEEECCCEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHCC
T ss_conf 8642405343676332450451899829989999822980068999985999999999999998709