Query gi|254780544|ref|YP_003064957.1| phosphoglucosamine mutase protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 448
No_of_seqs 148 out of 5530
Neff 8.2
Searched_HMMs 23785
Date Tue May 31 21:25:09 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780544.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wqa_A Phospho-sugar mutase; a 100.0 0 0 675.8 34.4 440 1-446 1-453 (455)
2 1p5d_X PMM, phosphomannomutase 100.0 0 0 668.6 34.0 430 2-448 10-457 (463)
3 2fuv_A Phosphoglucomutase; str 100.0 0 0 672.3 29.6 440 2-446 41-545 (549)
4 2z0f_A Putative phosphoglucomu 100.0 0 0 664.7 25.2 439 5-447 25-523 (524)
5 3i3w_A Phosphoglucosamine muta 100.0 0 0 648.4 31.0 439 1-446 1-441 (443)
6 2f7l_A 455AA long hypothetical 100.0 0 0 636.3 35.7 437 1-444 1-453 (455)
7 1kfi_A Phosphoglucomutase 1; p 100.0 0 0 646.5 25.2 425 6-433 21-539 (572)
8 3pmg_A Alpha-D-glucose-1,6-bis 100.0 0 0 641.1 27.2 422 6-428 16-521 (561)
9 1tuo_A Putative phosphomannomu 100.0 0 0 632.9 30.3 433 1-444 8-463 (464)
10 2dka_A Phosphoacetylglucosamin 100.0 0 0 483.3 17.7 402 27-444 2-544 (544)
11 1wjw_A Phosphoacetylglucosamin 99.4 4.4E-13 1.8E-17 98.8 7.7 78 368-446 9-96 (112)
12 2dka_A Phosphoacetylglucosamin 98.8 4.7E-09 2E-13 73.9 4.4 50 43-92 133-183 (544)
13 2vvr_A Ribose-5-phosphate isom 91.1 0.65 2.7E-05 23.6 6.6 58 43-102 2-68 (149)
14 2yxb_A Coenzyme B12-dependent 91.0 0.7 2.9E-05 23.4 7.9 59 40-102 16-78 (161)
15 1ccw_A Protein (glutamate muta 91.0 0.71 3E-05 23.4 8.1 59 42-104 3-65 (137)
16 2ehp_A AQ_1627 protein; putati 90.5 0.78 3.3E-05 23.2 8.6 105 5-136 4-110 (126)
17 2vvp_A Ribose-5-phosphate isom 89.5 0.93 3.9E-05 22.7 7.3 57 44-102 5-71 (162)
18 2q9u_A A-type flavoprotein; fl 88.1 1.2 4.9E-05 22.1 10.7 21 251-271 226-246 (414)
19 1o1x_A Ribose-5-phosphate isom 88.1 1.2 4.9E-05 22.1 7.7 58 43-102 13-79 (155)
20 3fni_A Putative diflavin flavo 88.1 1.2 4.9E-05 22.1 7.5 60 41-101 3-64 (159)
21 3ezx_A MMCP 1, monomethylamine 84.3 1.8 7.7E-05 20.9 7.4 50 42-94 92-145 (215)
22 2i2x_B MTAC, methyltransferase 80.4 2.6 0.00011 19.9 10.5 51 176-238 123-177 (258)
23 3k7p_A Ribose 5-phosphate isom 78.4 3 0.00012 19.6 6.4 31 44-76 24-54 (179)
24 3bul_A Methionine synthase; tr 76.5 3.4 0.00014 19.2 7.7 87 42-133 98-202 (579)
25 3he8_A Ribose-5-phosphate isom 73.5 4 0.00017 18.8 7.4 57 44-102 2-67 (149)
26 1y80_A Predicted cobalamin bin 73.4 4 0.00017 18.8 8.0 56 43-102 89-148 (210)
27 1vme_A Flavoprotein; TM0755, s 69.2 5 0.00021 18.2 9.7 18 426-443 392-409 (410)
28 3c5y_A Ribose/galactose isomer 64.0 6.3 0.00027 17.5 5.8 21 226-246 74-94 (231)
29 1xrs_B D-lysine 5,6-aminomutas 60.7 7.2 0.0003 17.2 5.8 54 174-239 118-184 (262)
30 2ppw_A Conserved domain protei 59.5 7.6 0.00032 17.0 6.0 69 176-246 3-78 (216)
31 3hly_A Flavodoxin-like domain; 58.1 8.1 0.00034 16.9 7.8 36 44-79 2-38 (161)
32 2q62_A ARSH; alpha/beta, flavo 55.4 8.9 0.00038 16.6 7.4 34 45-78 38-73 (247)
33 2zki_A 199AA long hypothetical 52.0 10 0.00042 16.3 4.9 38 42-79 4-41 (199)
34 3kgf_A Probable 3-deoxy-D-arab 50.4 11 0.00045 16.1 4.0 30 20-52 61-90 (464)
35 1xk7_A Crotonobetainyl-COA:car 49.8 3.2 0.00014 19.3 0.3 26 69-94 16-42 (408)
36 3ono_A Ribose/galactose isomer 47.1 12 0.00051 15.8 6.7 21 226-246 57-77 (214)
37 1ycg_A Nitric oxide reductase; 37.3 17 0.00072 14.9 8.9 29 417-446 368-396 (398)
38 2fzv_A Putative arsenical resi 36.1 18 0.00075 14.7 6.3 34 45-78 62-97 (279)
39 3nvt_A 3-deoxy-D-arabino-heptu 34.7 9.6 0.0004 16.4 0.8 65 223-297 157-223 (385)
40 2npt_A Dual specificity mitoge 32.5 14 0.00057 15.5 1.3 27 242-275 61-87 (106)
41 2yqu_A 2-oxoglutarate dehydrog 31.4 13 0.00056 15.5 1.1 85 176-264 167-256 (455)
42 3ne8_A N-acetylmuramoyl-L-alan 30.8 19 0.00079 14.6 1.8 12 175-186 3-14 (234)
43 2qn6_B Translation initiation 29.9 23 0.00095 14.1 4.6 56 389-445 20-79 (93)
44 3d4o_A Dipicolinate synthase s 29.9 17 0.00072 14.9 1.4 108 174-306 153-264 (293)
45 1rvg_A Fructose-1,6-bisphospha 29.2 23 0.00098 14.0 7.8 87 14-109 21-111 (305)
46 1aj0_A DHPS, dihydropteroate s 28.6 24 0.001 14.0 9.6 31 51-81 32-62 (282)
47 2pk3_A GDP-6-deoxy-D-LYXO-4-he 28.5 21 0.0009 14.3 1.7 32 44-79 14-45 (321)
48 3abz_A Beta-glucosidase I; gly 28.1 24 0.001 13.9 4.5 81 19-100 73-192 (845)
49 3hgm_A Universal stress protei 26.6 26 0.0011 13.8 4.5 44 43-86 3-46 (147)
50 3ff1_A Glucose-6-phosphate iso 25.9 24 0.00099 14.0 1.6 18 61-78 67-84 (446)
51 2z08_A Universal stress protei 24.4 28 0.0012 13.5 3.5 40 43-82 3-42 (137)
52 2ohh_A Type A flavoprotein FPR 22.9 30 0.0013 13.3 8.8 16 251-266 229-245 (404)
53 3hzp_A NTF2-like protein of un 22.9 28 0.0012 13.6 1.5 24 208-231 29-52 (131)
54 1e5d_A Rubredoxin\:oxygen oxid 22.1 32 0.0013 13.2 10.5 21 251-271 222-243 (402)
55 2fkn_A Urocanate hydratase; ro 21.9 32 0.0013 13.2 4.2 12 186-197 238-249 (552)
56 1q7e_A Hypothetical protein YF 20.6 14 0.00057 15.5 -0.5 26 69-94 8-34 (428)
57 2ex4_A Adrenal gland protein A 20.5 34 0.0014 13.0 4.9 42 164-206 67-108 (241)
58 1fob_A Beta-1,4-galactanase; B 20.1 35 0.0015 13.0 4.0 69 106-187 15-84 (334)
59 1ws6_A Methyltransferase; stru 20.1 35 0.0015 13.0 3.7 53 40-93 9-64 (171)
No 1
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal complex, isomerase; 2.00A {Pyrococcus horikoshii}
Probab=100.00 E-value=0 Score=675.83 Aligned_cols=440 Identities=31% Similarity=0.493 Sum_probs=386.7
Q ss_pred CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC-CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 9652033586015506877889999999999999997237-998389996687797999999999999789879996267
Q gi|254780544|r 1 MKRRFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKK-KHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPI 79 (448)
Q Consensus 1 m~r~lFGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~~-~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~ 79 (448)
|.| ||||+||||++|+ +|||+++.++|+|++++++... .+++|+||||+|++|++|++++++||+++|++|+++|.+
T Consensus 1 m~~-~FGt~GiRG~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~VviG~D~R~ss~~l~~~~~~~l~~~G~~v~~~g~~ 78 (455)
T 1wqa_A 1 MGK-LFGTFGVRGIANE-KITPEFAMKIGMAFGTLLKREGRKKPLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDVGIA 78 (455)
T ss_dssp CCT-TCBTTBEEEEBTT-TBCHHHHHHHHHHHHHHHHHTTCSSCEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCC-CCCCCCCEEECCC-CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 966-3686680125189-88899999999999999997189999899998997369999999999999869969982878
Q ss_pred CHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 80899999987199258988654777520125640365456783578999999615664334454332221113542566
Q gi|254780544|r 80 PSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDR 159 (448)
Q Consensus 80 ptP~l~~a~~~~~~~gGI~iTaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (448)
|||+++|++++++++|||||||||||++|||+|+++++|.++.+..+++||.++........ ....++.... .++.+.
T Consensus 79 ~TP~l~~~v~~~~~~~Gi~iTaShnp~~~nG~K~~~~~g~~~~~~~~~~ie~~~~~~~~~~~-~~~~~~~~~~-~~~~~~ 156 (455)
T 1wqa_A 79 PTPAVQWATKHFNADGGAVITASHNPPEYNGIKLLEPNGMGLKKEREAIVEELFFKEDFDRA-KWYEIGEVRR-EDIIKP 156 (455)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCTTSCTTEEEEEEECTTSSBCCHHHHHHHHHHHHHTCCCCC-CGGGCCCEEE-CCCHHH
T ss_pred CHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCC-CCCCCCCEEE-CCHHHH
T ss_conf 86999999997298874378734798656865975466876651388898888751242223-4445560463-415899
Q ss_pred HHHHHHHCCCCH-HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHCCCCC
Q ss_conf 688776326310-211896699984466543333222123332222222322235577--44221013777642002343
Q gi|254780544|r 160 YIEHVKRTLPRD-VTLQGLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGININ--LDCGSTNVLSLQRKVHEVRA 236 (448)
Q Consensus 160 Yi~~l~~~~~~~-~~~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~~i~~~pd~~~~~--~~~~~~~~~~l~~~v~~~~a 236 (448)
|++.+.+.+... +..++++|++||+||+++.+++++|+++||+++.++++||+.|++ |+|.++.+..+.+.+++.++
T Consensus 157 Y~~~~~~~~~~~~~~~~~~~iv~d~~~G~~~~~~~~ll~~lg~~v~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~a 236 (455)
T 1wqa_A 157 YIEAIKSKVDVEAIKKRKPFVVVDTSNGAGSLTLPYLLRELGCKVITVNAQPDGYFPARNPEPNEENLKEFMEIVKALGA 236 (455)
T ss_dssp HHHHHHTTSCHHHHHHHCCEEEEECTTSGGGGTHHHHHHHHTCEEEEESCSCCTTCSSSCSCCCTTTTHHHHHHHHHHTC
T ss_pred HHHHHHHHCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 99999863354444135762799547886899999999972995799613589988889998752239999999862245
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf 03675315521000133223755331135677776553200223433322113600444320012111112332110111
Q gi|254780544|r 237 DIGIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDRYIME 316 (448)
Q Consensus 237 d~Gia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k~i~~ 316 (448)
|+|+++||||||++++|++|++++++++.++++.+++.+. +...+++++.++..++.+++++|+++++|+||+||+.+
T Consensus 237 d~g~a~D~DgDR~~~~d~~g~~~~~~~~~~l~~~~~~~~~--~~~~v~~~~~~s~~~~~~~~~~g~~~~~~~tG~k~i~~ 314 (455)
T 1wqa_A 237 DFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEK--GGGLLVTTVATSNLLDDIAKKHGAKVMRTKVGDLIVAR 314 (455)
T ss_dssp SEEEEECTTSCCEEEEETTSCBCCHHHHHHHHHHHHHHHH--TSCEEEEETTSCTHHHHHHHHTTCEEEEECSSTTHHHH
T ss_pred CEEEEECCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHC--CCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHH
T ss_conf 1677885999879999546967715279999999999755--79984336311079999999729846760461899999
Q ss_pred HHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHH
Q ss_conf 11028970013466236530100014442332024667775588889999865642300000005676511558999998
Q gi|254780544|r 317 YMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKPVSTICHCFEEYPQFLRSVSVKDTSILNSSSIVQAI 396 (448)
Q Consensus 317 ~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~le~l~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~ 396 (448)
+|.+.++.+|+|+|||++++++.+++||++++++++++++.++++++++++.|+++++...++.++........++.+..
T Consensus 315 ~~~~~~~~~g~E~sg~~~~~~~~~~~D~~~a~~~~le~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (455)
T 1wqa_A 315 ALYENNGTIGGEENGGVIFPEHVLGRDGAMTVAKVVEIFAKSGKKFSELIDELPKYYQIKTKRHVEGDRHAIVNKVAEMA 394 (455)
T ss_dssp HHHHTTCSEEEETTEEEECTTTCSSCCHHHHHHHHHHHHHHHCSCHHHHHHTSCCCEEEEECCBCCSSHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHH
T ss_conf 99825977998444680353211367306899999997766499878999987774065610133431899999999987
Q ss_pred HHHHHH---CCC------CCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf 765543---078------86599967798227999961599899999999999998752
Q gi|254780544|r 397 ADAESE---LRG------IDRLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVIPMI 446 (448)
Q Consensus 397 ~~~~~~---~~~------~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~i~~i 446 (448)
.+.... +|| .+|++||||||||++|||+||+|++.++++++.+.++|+++
T Consensus 395 ~~~~~~~~~~Dgik~~~~~g~~~iRpSGTEp~irvY~Ea~~~e~a~~l~~~~~~~v~~~ 453 (455)
T 1wqa_A 395 RERGYTVDTTDGAKIIFEDGWVLVRASGTEPIIRIFSEAKSKEKAQEYLNLGIELLEKA 453 (455)
T ss_dssp HHTTCEEECTTSEEEECSSCEEEECCCSSSSBCCEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCEEEEECCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 63378623456389980987999980198117999999799999999999999999997
No 2
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme-ligand complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3bkq_X* 3c04_A* 2fkm_X*
Probab=100.00 E-value=0 Score=668.62 Aligned_cols=430 Identities=27% Similarity=0.426 Sum_probs=374.1
Q ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCH
Q ss_conf 65203358601550687788999999999999999723799838999668779799999999999978987999626780
Q gi|254780544|r 2 KRRFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPIPS 81 (448)
Q Consensus 2 ~r~lFGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~pt 81 (448)
+++|||++||||++|+ +|||++++++|.|||+++..+ ..++|+||||+|++|++|++++++||+++|++|+++|.+||
T Consensus 10 ~~~if~~~~IRG~~~~-~it~e~~~~l~~A~~~~~~~~-~~~~VvVG~D~R~~s~~~~~~~~~gL~s~Gi~V~~~g~~pT 87 (463)
T 1p5d_X 10 PASIFRAYDIRGVVGD-TLTAETAYWIGRAIGSESLAR-GEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPT 87 (463)
T ss_dssp CGGGBCSSSEEEEBTT-TBCHHHHHHHHHHHHHHHHHT-TCCEEEEEECSCTTHHHHHHHHHHHHHTBTCEEEEEEECCH
T ss_pred CHHHCCCCCEEEECCC-CCCHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCH
T ss_conf 9777455564025489-859999999999999999876-99989999799725999999999999986996999087878
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 89999998719925898865477752012564036545678357899999961566433445433222111354256668
Q gi|254780544|r 82 PAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDRYI 161 (448)
Q Consensus 82 P~l~~a~~~~~~~gGI~iTaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Yi 161 (448)
|+++|++++++++|||||||||||++|||+||+++.|.+..+..+..++.+.+.... +..+.....+ ..+.|+
T Consensus 88 P~l~~~v~~~~a~gGI~ITaSHnp~~~nG~K~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~y~ 160 (463)
T 1p5d_X 88 PVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVAGETLANEQIQALRERIEKNDLA------SGVGSVEQVD-ILPRYF 160 (463)
T ss_dssp HHHHHHHHHSSCSEEEEECCTTSCTTEEEEEEEETTEECCTHHHHHHHHHHHHTCCC------CBCCEEEECC-CHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHH------HCCCCEEEEC-CHHHHH
T ss_conf 999999997199816999678997434575310024655626788878766504202------1267424504-288999
Q ss_pred HHHHHCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CHHHHHHHHHCCCCCCE
Q ss_conf 877632631021189669998446654333322212333222222232223557744221---01377764200234303
Q gi|254780544|r 162 EHVKRTLPRDVTLQGLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGS---TNVLSLQRKVHEVRADI 238 (448)
Q Consensus 162 ~~l~~~~~~~~~~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~~i~~~pd~~~~~~~~~~---~~~~~l~~~v~~~~ad~ 238 (448)
+++.+.+. ..+++||++||+||+++.+++++|+.|||+++.+|++||+.|++..|+| +++..+.+.++++++|+
T Consensus 161 ~~~~~~~~---~~~~lkIvvd~~~G~~~~~~~~il~~lg~~~~~i~~~~dg~f~~~~p~p~~~e~l~~l~~~v~~~~~dl 237 (463)
T 1p5d_X 161 KQIRDDIA---MAKPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADL 237 (463)
T ss_dssp HHHHTTCC---CSSCEEEEEECTTSGGGGTHHHHHHHHHEEEEEESCSCCTTCCSSCSCTTSGGGGHHHHHHHHHTTCSE
T ss_pred HHHHHHHH---CCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 99986433---148998999899971899999999974993999816259988999989983999999999998559871
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 67531552100013322375533113567777655320022343332211360044432001211111233211011111
Q gi|254780544|r 239 GIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDRYIMEYM 318 (448)
Q Consensus 239 Gia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k~i~~~~ 318 (448)
|++|||||||++++|++|+++++|++++|++++++++. ++..++.++.+|..++++++++|+++++|+||+|||.++|
T Consensus 238 gia~DgDaDR~~~vd~~G~~i~~d~~~~lla~~l~~~~--~~~~vv~~~~~s~~~~~~~~~~g~~~~~t~~G~k~i~~~~ 315 (463)
T 1p5d_X 238 GLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRN--PGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKM 315 (463)
T ss_dssp EEEECTTSSBEEEEETTCCEECHHHHHHHHHHHHHHHS--TTCEEEEETTSCTHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred CEEECCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHC--CCCCEEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHH
T ss_conf 14886897727888058819871589999999999738--8995101200107899999977998999687379999999
Q ss_pred HCCCCEECCCCCCEEEEECCCCC-CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCE-EEEEECCCCCCCCHHHHHHHH
Q ss_conf 02897001346623653010001-4442332024667775588889999865642300-000005676511558999998
Q gi|254780544|r 319 KNNGFNVGGEQSGHIILSDYGST-GDGLVAALQVLRYIKQYDKPVSTICHCFEEYPQF-LRSVSVKDTSILNSSSIVQAI 396 (448)
Q Consensus 319 ~~~~~~~g~E~sg~~~~~~~~~~-~Dgi~a~l~~le~l~~~~~~l~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~~ 396 (448)
++.++++|+|+|||++|+++.+. +|++++++++++++++.+++++++.+.+|++... ..++.|++. .+..+++.+
T Consensus 316 ~~~~~~~g~E~sg~~~~~~~~~~~dd~i~~~l~l~~~l~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~---~k~~v~~~l 392 (463)
T 1p5d_X 316 KETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTED---SKFAIIEAL 392 (463)
T ss_dssp HHHCCSEEECTTSBEEETTTTCSSBCHHHHHHHHHHHHHTCSSCHHHHHHTSCCCEECCCEEEECCTT---THHHHHHHH
T ss_pred HHCCCEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCHH---HHHHHHHHH
T ss_conf 76896899937688888776677763799999999999983995899999726641884474205856---689999999
Q ss_pred HHHH----HH---CCC------CCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 7655----43---078------8659996779822799996159989999999999999875209
Q gi|254780544|r 397 ADAE----SE---LRG------IDRLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVIPMIDS 448 (448)
Q Consensus 397 ~~~~----~~---~~~------~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~i~~i~~ 448 (448)
.+.. .+ +|| .+|++||||||||++|||+||+|++.++++++++.+.|+.|++
T Consensus 393 ~~~~~~~~~~~~~iDGiki~~~dgw~liRpSgTEP~iRiy~Ea~~~~~~e~l~~~~~~~i~~i~~ 457 (463)
T 1p5d_X 393 QRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAVDS 457 (463)
T ss_dssp HHHCCCCSSEEECSSSEEEEETTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHCCCCEECCCEEEEECCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99986220470004428998198899998049824589999749999999999999999999876
No 3
>2fuv_A Phosphoglucomutase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, isomerase; HET: MSE; 2.00A {Salmonella typhimurium LT2}
Probab=100.00 E-value=0 Score=672.26 Aligned_cols=440 Identities=20% Similarity=0.264 Sum_probs=352.5
Q ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEE---ECC
Q ss_conf 65203358601550687788999999999999999723799838999668779799999999999978987999---626
Q gi|254780544|r 2 KRRFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFI---LGP 78 (448)
Q Consensus 2 ~r~lFGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~---~g~ 78 (448)
||-.|||+||||++|...|||+++.++|+|||++++.+..+++|+||||+|++|++|++++++||+++|++|++ +|.
T Consensus 41 ~~i~FGT~GiRG~~g~~~~t~~~~~~~~~a~~~~l~~~~~~~~VvIg~D~R~~s~~~~~~~~~gL~s~Gi~V~~~~~~G~ 120 (549)
T 2fuv_A 41 HAVKFGTSGHRGSAGRHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGF 120 (549)
T ss_dssp GSCCCBTTBEEECGGGTSSSHHHHHHHHHHHHHHHHHTTCCSCEEEEECSCTTHHHHHHHHHHHHHHTTCCEEEEGGGCC
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 66686798767566999889999999999999999863999809999789615899999999999977997999588883
Q ss_pred CCHHHHHHHHHHHCC-----CEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC--------
Q ss_conf 780899999987199-----2589886547775201256403654567835789999996156643344543--------
Q gi|254780544|r 79 IPSPAVAMLTRSLRA-----DVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSCYD-------- 145 (448)
Q Consensus 79 ~ptP~l~~a~~~~~~-----~gGI~iTaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~-------- 145 (448)
+|||+++|+++++++ ++||||||||||++||||||++++|.+++++.+++||+.++...........
T Consensus 121 ~pTP~~~~av~~~~~~~~~~~~GimITASHNP~~~NGiK~~~~~G~~l~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~ 200 (549)
T 2fuv_A 121 TPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVEDRANALLAGGLQGVKRISLDAAM 200 (549)
T ss_dssp CCHHHHHHHHHHHHHTCSSCCEEEEECCTTCCTTCEEEEEECTTSSCCCHHHHHHHHHHHHHHHHTTTTTCCCCCHHHHH
T ss_pred CCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 68089999999960136773425999647898322766763489864645789999999976532023334334421113
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCH-HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCC-C
Q ss_conf 32221113542566688776326310-21189669998446654333322212333222222232223557--74422-1
Q gi|254780544|r 146 SIGHAKRVDGVHDRYIEHVKRTLPRD-VTLQGLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGINI--NLDCG-S 221 (448)
Q Consensus 146 ~~~~~~~~~~~~~~Yi~~l~~~~~~~-~~~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~~i~~~pd~~~~--~~~~~-~ 221 (448)
..+.+. ..+..+.|++++++.++.+ ++.+++||++||+||+++.+++++|+++||+++.+|++||+.|+ +|+|. +
T Consensus 201 ~~~~i~-~~d~~~~Y~~~l~~~i~~~~i~~~~lkIvvD~~nG~~~~~~~~il~~lg~~~~~~~~~~~~~f~~~~~~~~~~ 279 (549)
T 2fuv_A 201 ASGHVK-AVDLVQPFVEGLADIVDMAAIQKAGLTLGVDPLGGSGIEYWKRIAEHYKLNLTLVNDQVDQTFRFMHLDKDGA 279 (549)
T ss_dssp HTSCEE-EECCHHHHHHHGGGTSCHHHHHHHTCCEEEECTTCTTHHHHHHHHHHTTCCEEESCCCCCTTCTTSBCCTTSC
T ss_pred CCCEEE-ECCHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 577067-4211889999998871402242269769984577653556612433216642112223456689889999644
Q ss_pred ------CHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCHH
Q ss_conf ------01377764200234303675315521000133223755331135677776553200223--4333221136004
Q gi|254780544|r 222 ------TNVLSLQRKVHEVRADIGIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRG--NGIVTTVMSNIGL 293 (448)
Q Consensus 222 ------~~~~~l~~~v~~~~ad~Gia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~~~~~~--~~vv~~v~ss~~i 293 (448)
.....+...+++.++|+|+++||||||++++|++|. +.+++++++++.++++++..++ ..|+.+++||.++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~adlgia~DgDaDR~~ivd~~g~-v~~~~~~~ll~~~l~~~~~~~~~~~~vv~tv~ss~~~ 358 (549)
T 2fuv_A 280 IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGL-MNPNHYLAVAINYLFQHRPLWGKDVAVGKTLVSSAMI 358 (549)
T ss_dssp CCCCTTCTTTTHHHHTTGGGCSEEEECCTTSCBCEEEETTEE-CCHHHHHHHHHHHHHHSCTTSCTTCEEEEETTSCTHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCC-CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 443315689999987651360599998699876899968984-2587155899999997151148773003565562788
Q ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCEEEEEC-----CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH
Q ss_conf 44320012111112332110111110289700134662365301-----0001444233202466777558888999986
Q gi|254780544|r 294 ERFIAGLGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSD-----YGSTGDGLVAALQVLRYIKQYDKPVSTICHC 368 (448)
Q Consensus 294 ~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~~g~E~sg~~~~~~-----~~~~~Dgi~a~l~~le~l~~~~~~l~~l~~~ 368 (448)
+++++++|++++||+|||||+.++|++.+++||||+|||++|++ |.+++||++++++++++++.+++++++++++
T Consensus 359 ~~ia~~~g~~v~~t~vG~k~i~~~m~~~~~~~ggEeSgg~~~~~~~~~~~~~~kDgi~a~l~ile~la~~~~~l~~ll~e 438 (549)
T 2fuv_A 359 DRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNE 438 (549)
T ss_dssp HHHHHHHTCCEEEECSSGGGGHHHHHHTSEEEEEETTTEEEECCTTSSCSCSSCCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 99999739810125650899999875058516897048767424666531267369999999999999859699999999
Q ss_pred HHHCC-C--E-EEEEECCCCCCCCHHHHHHHHHHH------------------H---------HHCCCCCEEEEECCCCC
Q ss_conf 56423-0--0-000005676511558999998765------------------5---------43078865999677982
Q gi|254780544|r 369 FEEYP-Q--F-LRSVSVKDTSILNSSSIVQAIADA------------------E---------SELRGIDRLIVRASGTE 417 (448)
Q Consensus 369 l~~~~-~--~-~~~~~~~~~~~~~~~~i~~~~~~~------------------~---------~~~~~~~w~liRpSgTE 417 (448)
+++.. . + ...+.+.. ..+..+.+...+. . .-+.+.+|++|||||||
T Consensus 439 l~~~~g~~~~~~~~~~~~~---~~k~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~idGlki~~~~gw~lvRpSGTE 515 (549)
T 2fuv_A 439 LAARFGAPSYNRLQASATS---AQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARPSGTE 515 (549)
T ss_dssp HHHHHCCCEEEEEEEECCH---HHHHHHHTCCGGGCCCCEETTEECCEEEEECTTTCCEEEEEEEECSSEEEEEEECSSS
T ss_pred HHHHHCCCCCEEEECCCCH---HHHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCCCCCCCEEEEECCEEEEEECCCCC
T ss_conf 9999689976066044676---7899999866764254101476216887316676556662799849989999857980
Q ss_pred CEEEEEEECCC-HHHHHHHHHHHHHHHHHH
Q ss_conf 27999961599-899999999999998752
Q gi|254780544|r 418 SLIRIMAEGDD-LSRIKRIVDDLAKVIPMI 446 (448)
Q Consensus 418 p~iriy~Ea~~-~~~~~~l~~~~~~~i~~i 446 (448)
|++|||+||.+ ++.++++.+++.++|+++
T Consensus 516 P~iRvy~Ea~~~~e~~~~l~~~~~~~i~~~ 545 (549)
T 2fuv_A 516 DAYKIYCESFLGEEHRKQIEKEAVEIVSEV 545 (549)
T ss_dssp SEEEEEEEESSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 569999983785899999999999999999
No 4
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics, NPPSFA; 2.52A {Thermus thermophilus HB8}
Probab=100.00 E-value=0 Score=664.75 Aligned_cols=439 Identities=21% Similarity=0.247 Sum_probs=352.5
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE---CCCCH
Q ss_conf 033586015506877889999999999999997237998389996687797999999999999789879996---26780
Q gi|254780544|r 5 FFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFIL---GPIPS 81 (448)
Q Consensus 5 lFGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~---g~~pt 81 (448)
-|||+||||.++..++|++++.++++|++.+++..+.+++|+||||+|++|++|+++++++|+++|++|+.+ |.+||
T Consensus 25 ~FGT~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~VvIG~D~R~~s~~~a~~~~~~l~~~Gi~V~~~~~~g~~pT 104 (524)
T 2z0f_A 25 RFGTSGHRGSSLKATFTEAHVLAIAQAIAELRPSFGATGPLFLAKDTHALSEPAWATALSVFAAHGIEVRVEADGDYTPT 104 (524)
T ss_dssp CEETTEEEECGGGTSSCHHHHHHHHHHHHHHTTTTTCCSCEEEEECSCTTHHHHHHHHHHHHHHTTCCEEEESSSSCCCH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
T ss_conf 76884125877888989999999999999999965999739999799706899999999999977998999389982376
Q ss_pred HHHHHHHHHHC-----CCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-----CCCC
Q ss_conf 89999998719-----9258988654777520125640365456783578999999615664334454332-----2211
Q gi|254780544|r 82 PAVAMLTRSLR-----ADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSCYDSI-----GHAK 151 (448)
Q Consensus 82 P~l~~a~~~~~-----~~gGI~iTaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~-----~~~~ 151 (448)
|+++|++++++ ++|||||||||||++||||||++++|.++.++.+++||+.++............+ ....
T Consensus 105 P~~~~av~~~~~~~~~~~~GImITASHNP~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (524)
T 2z0f_A 105 PLVSLAILEHNAHHEAKADGVLLTPSHNPPEDGGFKYNPPTGGPANARITRAIEERANALLQEGLKGVKRLPLREALARA 184 (524)
T ss_dssp HHHHHHHHHHHTTCSSCCEEEEECC--CCTTCEEEEEECTTSSCCCHHHHHHHHHHHHHHHHTTTTTCCCCCHHHHHHHC
T ss_pred CHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
T ss_conf 68999999841012466715999547898544865762489873660578999999998765300346657731125521
Q ss_pred CCCCHHHHHHHHHHHCCCCH-HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---HH---
Q ss_conf 13542566688776326310-211896699984466543333222123332222222322235577442210---13---
Q gi|254780544|r 152 RVDGVHDRYIEHVKRTLPRD-VTLQGLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGST---NV--- 224 (448)
Q Consensus 152 ~~~~~~~~Yi~~l~~~~~~~-~~~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~~i~~~pd~~~~~~~~~~~---~~--- 224 (448)
...++.+.|++.+.+.++.+ +..+++|||+||+||+++.+++++|+++||+++.+|+++|+.|+.+.+.+. +.
T Consensus 185 ~~~d~~~~Y~~~l~~~i~~~~~~~~~~kIvvD~~~G~~~~~~~~ll~~lG~~v~~i~~~~d~~~~~~~~~~~~~~~~~~~ 264 (524)
T 2z0f_A 185 KPFDYAGLYVEKVAEAVDLEAIRASGLRIGVDPLGGASLRVWERLAESHGLPLEVVNPTLDPTFRFMPKDHDGKIRMDCS 264 (524)
T ss_dssp EEECHHHHHHHHGGGTSCHHHHHHSCCCEEEECTTSTTHHHHHHHHHHHTCCEEEC------------------------
T ss_pred EEECHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56112888998654014610013568779996798841345677888728821575672578778777444354478875
Q ss_pred ---HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf ---77764200234303675315521000133223755331135677776553200223433322113600444320012
Q gi|254780544|r 225 ---LSLQRKVHEVRADIGIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLG 301 (448)
Q Consensus 225 ---~~l~~~v~~~~ad~Gia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a~~~g 301 (448)
....+.+++.++|+|+++||||||++++|++|++++++.++++++.++. .+..++..|+.+++||.+++++++++|
T Consensus 265 ~~~~~~~~~~~~~~adlgia~DgDaDR~~~vd~~G~~~~~~~l~~l~~~~~~-~~~~~~~~vv~t~~ss~~~~~ia~~~G 343 (524)
T 2z0f_A 265 SPYAMAGLLALKDRFDLAIGNDPDADRHGIVTPRGLMNPNHYLAAALHHLYT-TRSWPGAKVGKTAVTSALLDRVAQALG 343 (524)
T ss_dssp -------CCCCCCCSSEEEEECTTSCSEEEEETTEECCHHHHHHHHHHHHHT-TCCCTTCEEEEETTSCTHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCEECCHHHHHHHHHHHH-HHCCCCCEEEEEECCCHHHHHHHHHCC
T ss_conf 1567899987764014416874888769999189966221689999999987-503687727886312228899999679
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCEECCCCCCEEEE-----ECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH-CC--
Q ss_conf 1111123321101111102897001346623653-----010001444233202466777558888999986564-23--
Q gi|254780544|r 302 LSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIIL-----SDYGSTGDGLVAALQVLRYIKQYDKPVSTICHCFEE-YP-- 373 (448)
Q Consensus 302 ~~v~~t~vG~k~i~~~~~~~~~~~g~E~sg~~~~-----~~~~~~~Dgi~a~l~~le~l~~~~~~l~~l~~~l~~-~~-- 373 (448)
+++++|+|||||+.++|.+.++.||||+|||++| ++|.+++||++++++++++++++++++++|++.+++ |+
T Consensus 344 ~~v~~t~vG~k~i~~~~~e~~~~~ggEesgg~~~~~~~~~~~~~d~Dgi~a~l~~le~~a~~~~~~~~l~~~l~~~~~~~ 423 (524)
T 2z0f_A 344 REVYETPVGFKHFVAGLLEGWLGFAGEESAGASFLRFDGRPFSTDKDGILMGLLAAELMAKRGQAPDALYEALAEKLGRP 423 (524)
T ss_dssp CCEEEECSSTHHHHHHHHHSSEEEEEETTTEEEECCTTSCCSCSSCCHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHCCC
T ss_pred CEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
T ss_conf 87998256359999987651035544445627862455544156722689999999999983999999999999986767
Q ss_pred -CEEEEEECCCCCCCCHHHHHHHHH-H-----------------HH---------HHCCCCCEEEEECCCCCCEEEEEEE
Q ss_conf -000000056765115589999987-6-----------------55---------4307886599967798227999961
Q gi|254780544|r 374 -QFLRSVSVKDTSILNSSSIVQAIA-D-----------------AE---------SELRGIDRLIVRASGTESLIRIMAE 425 (448)
Q Consensus 374 -~~~~~~~~~~~~~~~~~~i~~~~~-~-----------------~~---------~~~~~~~w~liRpSgTEp~iriy~E 425 (448)
....++++.. ..+..+.+... + .. .-..+.+|++||||||||++|||+|
T Consensus 424 ~~~~~~~~~~~---~~k~~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~idGik~~~~~gw~lvRpSGTEP~irvy~E 500 (524)
T 2z0f_A 424 YYARKDLPVSP---EAKARLARLSAKEVHPSTLAGEPVLQVLDRATGNGEPLGGIKVVAANAWFAVRPSGTEDVAKVYAE 500 (524)
T ss_dssp EEEEEEEECCH---HHHHHHTTCCTTTSCCSEETTEECCEEEEECTTTCCEEEEEEEECSSEEEEEEECSSSSEEEEEEE
T ss_pred CEEECCCCCCH---HHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEEEE
T ss_conf 40531413598---999999985532057045457613678730457666667879982998999984798136999998
Q ss_pred CC-CHHHHHHHHHHHHHHHHHHC
Q ss_conf 59-98999999999999987520
Q gi|254780544|r 426 GD-DLSRIKRIVDDLAKVIPMID 447 (448)
Q Consensus 426 a~-~~~~~~~l~~~~~~~i~~i~ 447 (448)
|. +++.++++++++.++|++.=
T Consensus 501 a~~~e~~~~~l~~~~~~~i~~~l 523 (524)
T 2z0f_A 501 SFLGEAHLERVLEEATALLHKAL 523 (524)
T ss_dssp ESSCHHHHHHHHHHHHHHHHHHT
T ss_pred ECCCHHHHHHHHHHHHHHHHHHH
T ss_conf 56889999999999999999974
No 5
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magnesium, metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=100.00 E-value=0 Score=648.45 Aligned_cols=439 Identities=38% Similarity=0.623 Sum_probs=389.7
Q ss_pred CCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 965203358601550-6877889999999999999997237998389996687797999999999999789879996267
Q gi|254780544|r 1 MKRRFFGTDGIRGKS-NTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPI 79 (448)
Q Consensus 1 m~r~lFGt~GiRG~~-~~~~~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~ 79 (448)
|.| +|||+||||.+ |. +|||++|+++|+|+|++++.....++|+||||+|++|++|++++++||+++|++|+++|.+
T Consensus 1 ~~~-~FGt~GiRG~v~~~-~~t~~~v~~l~~a~~~~l~~~~~~~~VvVG~D~R~sS~~l~~~i~~gl~s~Gv~V~d~g~~ 78 (443)
T 3i3w_A 1 MAK-YFGTDGIRGEVANS-TITVEFTQKLGNAVGSLINQKNYPKFVIVGQDTRSSGGFLKFALVSGLNAAGIDVLDLGVV 78 (443)
T ss_dssp --C-CCCSSSSEEEBSSS-SBSHHHHHHHHHHHHHHHHHTTCCSEEEEEECSCTTHHHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred CCC-CCCCCCCCEEECCC-CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 987-54888860688797-7699999999999999998369998799997999888999999999999869959995878
Q ss_pred CHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 80899999987199258988654777520125640365456783578999999615664334454332221113542566
Q gi|254780544|r 80 PSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDR 159 (448)
Q Consensus 80 ptP~l~~a~~~~~~~gGI~iTaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (448)
|||+++|+++++++++||||||||||++|||+||++++|.++.++.++++++........... .........+.....
T Consensus 79 ~TP~l~~~v~~~~a~~gi~itaShnp~~~ngik~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 156 (443)
T 3i3w_A 79 PTPVVAFMTVKHRAAAGFVITASHNKFTDNGIKLFSSNGFKLDDALEEEVEDMIDGDFIYQPQ--FKFGSYKILANAIDE 156 (443)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCTTSCTTEEEEEEEETTSCBCCHHHHHHHHHHHTSCCCCCTT--SCCCCEEECTTTTHH
T ss_pred CHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCHHHHHH
T ss_conf 859999999971888741452368960017466320478646055555678876402334454--556762231357777
Q ss_pred HHHHHHHCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 68877632631021189669998446654333322212333222222232223557744221013777642002343036
Q gi|254780544|r 160 YIEHVKRTLPRDVTLQGLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIG 239 (448)
Q Consensus 160 Yi~~l~~~~~~~~~~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~~i~~~pd~~~~~~~~~~~~~~~l~~~v~~~~ad~G 239 (448)
|........... ...++++++||+||+++.++++++..+++.+..++..||+.+++++|.++.+..+.+.+++.++|+|
T Consensus 157 ~~~~~~~~~~~~-~~~~~~i~vd~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~v~~~~adlg 235 (443)
T 3i3w_A 157 YIESIYSRFAKF-VNYKGKVVVDCAHGAASHNFEALLDKFGINYVSIASNPDGLNINVGCGATCVSNIKKAVKEQKADLG 235 (443)
T ss_dssp HHHHHHHHHTTT-CCCCSEEEEECTTSTTTTHHHHHHHHTTCEEEESSCCCCSSCTTTTCSTTCHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHCCHHH-CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE
T ss_conf 777765211012-0468659998788852013456654203344223137899999998763046789999971799889
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 75315521000133223755331135677776553200223433322113600444320012111112332110111110
Q gi|254780544|r 240 IALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDRYIMEYMK 319 (448)
Q Consensus 240 ia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k~i~~~~~ 319 (448)
++|||||||++++|++|+++++++++++++++++.+.. ...++.++.++..++++++++|+++++|+||++|+.+.+.
T Consensus 236 ~~~D~DgDR~~~id~~g~~~~~~~~~~lla~~~~~~~~--~~~vv~~~~~s~~~~~~~~~~~~~~~~~~~G~~~i~~~~~ 313 (443)
T 3i3w_A 236 ISLDGDADRIIIVDENGQEIDGDGILNILAQYSDICGG--TNGIVGTQMTNMSYENHYRANKIPFIRSKVGDRYVLEDLV 313 (443)
T ss_dssp EEECTTSCBEEEECTTSCEECHHHHHHHHHHTTTTTTC--CSCEEEETTSCHHHHHHHHHTTCCEEEESSSTTHHHHHHH
T ss_pred EEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC--CCCCEEEECCHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
T ss_conf 99859998899997986666517999999999998579--9872023120558999999879977997057288899997
Q ss_pred CCCCEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCC-HHHHHHHHHH
Q ss_conf 289700134662365301000144423320246677755888899998656423000000056765115-5899999876
Q gi|254780544|r 320 NNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKPVSTICHCFEEYPQFLRSVSVKDTSILN-SSSIVQAIAD 398 (448)
Q Consensus 320 ~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~le~l~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 398 (448)
+.++.+|+|+|||++|+.|.+++||+++++++++++++++++++++.+.++.+|+...++++.++...+ .+++...+.+
T Consensus 314 ~~~~~~~~e~sg~~~~~~~~~~~D~~~~~l~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (443)
T 3i3w_A 314 KYGYKIGGESSGHVINLNFGTTGDGLFTAIQLLAIFSQADKPVSEFKLQGELMQQTLINVPLTKKVAREDLQKVASDVND 393 (443)
T ss_dssp HHTCCEEECTTSBEEETTTCSSCCHHHHHHHHHHHTTTCSSCGGGTSCSSCCCEEEEEEEECSSCCCHHHHHTTHHHHHH
T ss_pred HCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHC
T ss_conf 43955887136885544555478638899999999998499899998626657721244221234568889999999844
Q ss_pred HHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf 554307886599967798227999961599899999999999998752
Q gi|254780544|r 399 AESELRGIDRLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVIPMI 446 (448)
Q Consensus 399 ~~~~~~~~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~i~~i 446 (448)
....+++.+|++||||||||++|||+||+|++.++++++++.+.|++.
T Consensus 394 ~~~~~~d~~w~~iRpSgTEp~irvY~Ea~~~~~a~~l~~~~~~~v~~~ 441 (443)
T 3i3w_A 394 VEKRLGNRGRVLLRPSGTEPVLRVMVEADDKSLATNEAEYLVEKVKQK 441 (443)
T ss_dssp HHHHHGGGEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 037977976999983898006899998599999999999999999985
No 6
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=100.00 E-value=0 Score=636.29 Aligned_cols=437 Identities=26% Similarity=0.409 Sum_probs=386.8
Q ss_pred CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 96520335860155068778899999999999999972379983899966877979999999999997898799962678
Q gi|254780544|r 1 MKRRFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPIP 80 (448)
Q Consensus 1 m~r~lFGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~p 80 (448)
|.| ||||+||||++|+ +|||+++.++|+|++++++ .+++|+||||+|++|++|++++++||+++|++|+++|.+|
T Consensus 1 ~~~-lFGt~GiRG~~~~-~~t~~~v~~~~~a~~~~l~---~~~~VvIG~DtR~ss~~l~~a~~~gl~a~Gv~V~d~g~~~ 75 (455)
T 2f7l_A 1 MGK-LFGTDGVRGIVNK-ELTPELVLKLSKAIGTFFG---KNSKILVGRDVRAGGDMLVKIVEGGLLSVGVEVYDGGMAP 75 (455)
T ss_dssp CCS-SCCSSSEEEEBTT-TBCHHHHHHHHHHHHHHHC---TTCEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CCC-CCCCCCEEEEECC-CCCHHHHHHHHHHHHHHHC---CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf 975-3288880135389-8699999999999999967---8985999989971699999999999997699799879777
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 08999999871992589886547775201256403654567835789999996156643344543322211135425666
Q gi|254780544|r 81 SPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDRY 160 (448)
Q Consensus 81 tP~l~~a~~~~~~~gGI~iTaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 160 (448)
||+++|+++++++++||||||||||++|||+|+++++|.++.++.+++|++++..............+.....+...+.|
T Consensus 76 TP~l~~~v~~~~~~~gi~iTaShnp~~~ng~k~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (455)
T 2f7l_A 76 TPALQYAVKTLGYDGGVVITASHNPAPYNGIKVVDKDGIEIRREKENEIEDLFFTERFNTIEWSSLTTEVKREDRVISTY 155 (455)
T ss_dssp HHHHHHHHHHHCCSEEEEECCTTSCTTEEEEEEECTTSSBCCHHHHHHHHHHHHHTCCCCCCGGGCCCCCEECCCHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 49999999956998379996279986457816750357534520223367776430013445333345432026789999
Q ss_pred HHHHHHCCCCH-HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHCCCCCC
Q ss_conf 88776326310-211896699984466543333222123332222222322235577--442210137776420023430
Q gi|254780544|r 161 IEHVKRTLPRD-VTLQGLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGININ--LDCGSTNVLSLQRKVHEVRAD 237 (448)
Q Consensus 161 i~~l~~~~~~~-~~~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~~i~~~pd~~~~~--~~~~~~~~~~l~~~v~~~~ad 237 (448)
.+.+...++.. +..++++|++||+||++..+++.+|+.+++++..++..+|+.+++ ++|.......+...++..++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~~d~~~g~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d 235 (455)
T 2f7l_A 156 VNGILSHVDIEKIKKKNYKVLIDPANSVGALSTPLVARALGCKIYTINGNLDPLFSARQPEPTFDSLKETAEVVKTLKVD 235 (455)
T ss_dssp HHHHHTTSCHHHHHHHCCEEEEECTTTGGGGTHHHHHHHTTCEEEEBSCSCCTTCTTSCSSCCTTTSHHHHHHHHHTTCS
T ss_pred HHHHHHCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 99876401144564159569997787742224503355417614574025799988788887425677777888732866
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHH
Q ss_conf 36753155210001332237553311356777765532002234333221136004443200121111123321101111
Q gi|254780544|r 238 IGIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDRYIMEY 317 (448)
Q Consensus 238 ~Gia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k~i~~~ 317 (448)
+|+++||||||+.++|++|++++++++.++++.+++.+.......+++++.+|.+++.+++.+|.+++++++|++|+.++
T Consensus 236 ~g~~~D~D~DR~~~~~~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~i~~~ 315 (455)
T 2f7l_A 236 LGVAHDGDADRAIFIDSEGRVQWGDRSGTLLSYWASVKNPKAIKKIVTAVSSSSLVEEYLSKYNIQVDWTKVGSVDIAHK 315 (455)
T ss_dssp EEEECCTTSCCCEEEETTSCBCCHHHHHHHHHHHHHHTCTTSCSEEEEETTSCTHHHHHHHTTTCEEEEECSCHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECHHHHHHH
T ss_conf 36787143221000234430432315899999999873756655555432333014567876197125532448999999
Q ss_pred HHCCCCEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHH
Q ss_conf 10289700134662365301000144423320246677755888899998656423000000056765115589999987
Q gi|254780544|r 318 MKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKPVSTICHCFEEYPQFLRSVSVKDTSILNSSSIVQAIA 397 (448)
Q Consensus 318 ~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~le~l~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 397 (448)
|.+.++++|+|+||||+++.+.+++||++++++++++++.++++++++.+.||++++...++.+.+ ......+++.+.
T Consensus 316 ~~~~~~~~~~E~sg~~~~~~~~~~~D~i~~~ll~~~~l~~~~~~l~~l~~~l~~~~~~~~~v~~~~--~~~~~~~~~~~~ 393 (455)
T 2f7l_A 316 VADENALAGFEENGGFMYPPHQYVRDGAMSFALMLELLANENVSSAELFDRLPKYYLVKTKVDLKP--GLMVEEIYKKIL 393 (455)
T ss_dssp HHHTTCSEEEETTEEEEBTTTBSSCCHHHHHHHHHHHHHHHTCCHHHHHHTSCCCEEEEEEEECCT--TCCHHHHHHHHH
T ss_pred HHCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCC--HHHHHHHHHHHH
T ss_conf 845890899647686263023446647889999999999818638999997566401120120470--132999999999
Q ss_pred HH----HH---HCCC------CCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 65----54---3078------865999677982279999615998999999999999987
Q gi|254780544|r 398 DA----ES---ELRG------IDRLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVIP 444 (448)
Q Consensus 398 ~~----~~---~~~~------~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~i~ 444 (448)
+. .. .+|| .+|++||||||||++|||+||+|++.+++++++++++|+
T Consensus 394 ~~~~~~~~~~~~iDgik~~~~~gr~~vRpSGTEp~vRvYaEa~~~~~a~~l~~~i~~lVe 453 (455)
T 2f7l_A 394 EVYSTSSVKAITIDGVKIIGKDFWFLVRKSGTEPIIRIMAEAKDENVANNLVNELKKIVE 453 (455)
T ss_dssp HHHCCTTSEEECSSSEEEEETTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred HHHCCCCCCEEEECEEEEECCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHC
T ss_conf 763236453444044999849889999802981058999986899999999999999976
No 7
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=100.00 E-value=0 Score=646.54 Aligned_cols=425 Identities=21% Similarity=0.236 Sum_probs=339.8
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC--CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE---CCCC
Q ss_conf 3358601550687788999999999999999723--7998389996687797999999999999789879996---2678
Q gi|254780544|r 6 FGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGK--KKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFIL---GPIP 80 (448)
Q Consensus 6 FGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~--~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~---g~~p 80 (448)
|||+||||+++. ++|++++.++++|++.++... ..+++|+||||+|++|++|+++++++|.++|++|+++ |.+|
T Consensus 21 FGTsG~RG~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~VvIG~D~R~~S~~~a~~~a~~l~a~Gi~v~~~~~~G~~P 99 (572)
T 1kfi_A 21 PGTSGLRKKVSE-ATQPNYLENFVQSIFNTLRKDELKPKNVLFVGGDGRYFNRQAIFSIIRLAYANDISEVHVGQAGLMS 99 (572)
T ss_dssp CBTTBEEEEHHH-HTSTTHHHHHHHHHHHHSCGGGSSSSCEEEEEECCCTTHHHHHHHHHHHHHHTTCSEEEEEGGGCBC
T ss_pred CCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 987656700240-0487789999999999977631678987999837985659999999999997799799958999768
Q ss_pred HHHHHHHHHHH-----CCCEEEEEEECCCCCCCE----EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC--------CC
Q ss_conf 08999999871-----992589886547775201----25640365456783578999999615664334--------45
Q gi|254780544|r 81 SPAVAMLTRSL-----RADVGVMISASHNPYQDN----GIKLFGPDGYKVSTDIEDRIETLLEDDLTSYL--------SC 143 (448)
Q Consensus 81 tP~l~~a~~~~-----~~~gGI~iTaSHNP~~~n----GiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~--------~~ 143 (448)
||+++|+++++ +|+|||||||||||++|| ||||++++|.+++++.+++|++.+++...... ..
T Consensus 100 TP~ls~av~~~~~~~~~a~~GImITASHNP~~~nynd~GiK~~~~~G~~~~~~~~~~I~~~~~~i~e~~~~~~~~~~~~~ 179 (572)
T 1kfi_A 100 TPASSHYIRKVNEEVGNCIGGIILTASHNPGGKEHGDFGIKFNVRTGAPAPEDFTDQIYTHTTKIKEYLTVDYEFEKHIN 179 (572)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEEEECCTTSCCSTTTCEEEEEEECTTSSBCCHHHHHHHHHHHTTCCEEEECCCCGGGTCC
T ss_pred CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 78999999984655457873899944899887677872699985888808879999999999987654304432233478
Q ss_pred CCCCCCC-------------CCCCCHHHHHHHHHHHCCCCHH-----HCCCCEEEEEECCCCCCCCCCCCCCCCC--CCC
Q ss_conf 4332221-------------1135425666887763263102-----1189669998446654333322212333--222
Q gi|254780544|r 144 YDSIGHA-------------KRVDGVHDRYIEHVKRTLPRDV-----TLQGLRIVVDCANGASYKVAPEVFWELG--ADV 203 (448)
Q Consensus 144 ~~~~~~~-------------~~~~~~~~~Yi~~l~~~~~~~~-----~~~~lkvvvD~~~G~~~~~~~~il~~lg--~~~ 203 (448)
.+..+.. ....+..+.|++.+.+.++.+. ..+++|||+||+||+++.+++++|+++| +.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~id~~~~y~~~l~~~~d~~~i~~~~~~~~lkIv~d~~~Ga~~~~~~~il~~lg~~~~~ 259 (572)
T 1kfi_A 180 LDQIGVYKFEGTRLEKSHFEVKVVDTVQDYTQLMQKLFDFDLLKGLFSNKDFSFRFDGMHGVAGPYAKHIFGTLLGCSKE 259 (572)
T ss_dssp TTSCEEEEEEBCCTTCCEEEEEEECSSHHHHHHHHHHSCHHHHHHHHTCTTCCEEEECTTSTHHHHHHHHHTTTTCCCGG
T ss_pred HHHCCCCCCCCCHHCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEE
T ss_conf 44415433464001036760699633889999998635887653000357844999778763100179999981899616
Q ss_pred CCCCCCCCCCCC--CCCCCCCHHHHHHHHHC-------CCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 222232223557--74422101377764200-------234303675315521000133223755331135677776553
Q gi|254780544|r 204 VVIGDKPNGINI--NLDCGSTNVLSLQRKVH-------EVRADIGIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMS 274 (448)
Q Consensus 204 ~~i~~~pd~~~~--~~~~~~~~~~~l~~~v~-------~~~ad~Gia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~ 274 (448)
..+|++||+.|+ +|+|.++++..|.+.+. ..++|+|+++||||||++++|++|++++||++++|++++++.
T Consensus 260 ~~~~~~pd~~F~~~~p~P~~~~~~~l~~~~~~~~~~~~~~~aDlgiA~DgDaDR~~vvd~~g~~l~gd~l~~Lla~~~~~ 339 (572)
T 1kfi_A 260 SLLNCDPSEDFGGGHPDPNLTYAHDLVELLDIHKKKDVGTVPQFGAACDGDADRNMILGRQFFVTPSDSLAVIAANANLI 339 (572)
T ss_dssp GEESCSCCTTGGGSCCCCSTTTTHHHHHHTTTTCCSCGGGSCSEEEEECTTSCBEEEEETTEEECHHHHHHHHHHTHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHH
T ss_conf 77647879998988899886548999998876666652147760235368655200025787750788999999999997
Q ss_pred HHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 20022343332211360044432001211111233211011111028970013466236530100014442332024667
Q gi|254780544|r 275 HSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRY 354 (448)
Q Consensus 275 ~~~~~~~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~le~ 354 (448)
++.. ...||.+++||.+++++++++|++++||+||||||.++|.+.++.||||+|||+ ++.|.+++||++++++++++
T Consensus 340 ~~~~-~~~vv~tv~sS~~l~~ia~~~G~~v~~t~vGfk~I~~~m~~~~~~~ggEeSgg~-~~~~~~~kDgi~a~l~~le~ 417 (572)
T 1kfi_A 340 FKNG-LLGAARSMPTSGALDKVAAKNGIKLFETPTGWKFFGNLMDAGLINLCGEESFGT-GSNHIREKDGIWAVLAWLTI 417 (572)
T ss_dssp STTC-CCCEEEETTSCTHHHHHHHHHTCCEEEECSSTHHHHHHHHTTSCSEEEETTTEE-EETTSSSCCHHHHHHHHHHH
T ss_pred HHCC-CCCEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEECCCCCCC-CCCCCCCCCHHHHHHHHHHH
T ss_conf 5336-764541012307899999967983799588469999899718964001356676-78888889899999999999
Q ss_pred HHHCCCC------HHHHHHHHH-HCCCE-EEEEECCCCCCCCHHHHHHHHHHHHH-------------------------
Q ss_conf 7755888------899998656-42300-00000567651155899999876554-------------------------
Q gi|254780544|r 355 IKQYDKP------VSTICHCFE-EYPQF-LRSVSVKDTSILNSSSIVQAIADAES------------------------- 401 (448)
Q Consensus 355 l~~~~~~------l~~l~~~l~-~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~------------------------- 401 (448)
++..+++ ++++++.+. +|+.. ...............++++.+.....
T Consensus 418 ~a~~~~~~~~~~~l~e~l~~l~~~~G~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 497 (572)
T 1kfi_A 418 LAHKNKNTDHFVTVEEIVTQYWQQFGRNYYSRYDYEQVDSAGANKMMEHLKTKFQYFEQLKQGNKADIYDYVDPVDQSVS 497 (572)
T ss_dssp HHHHTSSCSSCCCHHHHHHHHHHHHCEEEEEEEEEEEECHHHHHHHHHHHHTTHHHHHTTSTTCEEEECCEECTTTCCEE
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
T ss_conf 99968475433369999999999838670344110258878899999999863320344302431000110354457424
Q ss_pred -------HCCCCCEEEEECCCCCCE---EEEEEECCCHHHHH
Q ss_conf -------307886599967798227---99996159989999
Q gi|254780544|r 402 -------ELRGIDRLIVRASGTESL---IRIMAEGDDLSRIK 433 (448)
Q Consensus 402 -------~~~~~~w~liRpSgTEp~---iriy~Ea~~~~~~~ 433 (448)
.+++.+|++||||||||+ +|||+||.+++.++
T Consensus 498 ~~DGlr~~~~dg~wilvRpSGTEP~~~kiRvY~Ea~~~~~~~ 539 (572)
T 1kfi_A 498 KNQGVRFVFGDGSRIIFRLSGTGSVGATIRIYFEQFEQQQIQ 539 (572)
T ss_dssp CCCCEEEECTTSCEEEEEECSSCSSSEEEEEEEEEEESSCCC
T ss_pred CCCEEEEEECCCEEEEEECCCCCCCCCCEEEEEEECCHHHHH
T ss_conf 677489996698799997579978998389999879989999
No 8
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=100.00 E-value=0 Score=641.11 Aligned_cols=422 Identities=22% Similarity=0.277 Sum_probs=343.9
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC-CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE---CCCCH
Q ss_conf 3358601550687788999999999999999723-7998389996687797999999999999789879996---26780
Q gi|254780544|r 6 FGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGK-KKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFIL---GPIPS 81 (448)
Q Consensus 6 FGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~-~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~---g~~pt 81 (448)
|||+||||++|.+++|++++.++++|++.++... ..+++|+||||+|++|++|+++++++|+++|++|+++ |.+||
T Consensus 16 fGT~GiRG~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~VvIg~D~R~~S~~~a~~~a~~l~s~Gi~V~~~~~~g~~pT 95 (561)
T 3pmg_A 16 PGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILST 95 (561)
T ss_dssp CBTTBEEEEHHHHHHSTTHHHHHHHHHHHTSCGGGTTTCEEEEEECCCTTHHHHHHHHHHHHHHTTCCEEEEEEEEECCH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
T ss_conf 95876786158888897999999999999998733799879999789614899999999999987997999588897585
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCC---EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCC-----CCCCCC----
Q ss_conf 899999987199258988654777520---12564036545678357899999961566433445-----433222----
Q gi|254780544|r 82 PAVAMLTRSLRADVGVMISASHNPYQD---NGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSC-----YDSIGH---- 149 (448)
Q Consensus 82 P~l~~a~~~~~~~gGI~iTaSHNP~~~---nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~-----~~~~~~---- 149 (448)
|+++|++++++++|||||||||||++| ||+||++++|.++.++.+++|+++........... ...++.
T Consensus 96 P~l~~av~~~~a~~GImITASHNP~~yn~~nGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (561)
T 3pmg_A 96 PAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFD 175 (561)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTSCCSTTSEEEEEEEETTSSBCCHHHHHHHHHHHHHCCEEEECTTCCCCTTSCEEEEEC
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 89999998649986899976689986676506995376776377778999999997334430366444440002530134
Q ss_pred --------CCCCCCHHHHHHHHHHHCCCCHHH------CCCCEEEEEECCCCCCCCCCCCC-CCCCCCC-CCCCCCCCCC
Q ss_conf --------111354256668877632631021------18966999844665433332221-2333222-2222322235
Q gi|254780544|r 150 --------AKRVDGVHDRYIEHVKRTLPRDVT------LQGLRIVVDCANGASYKVAPEVF-WELGADV-VVIGDKPNGI 213 (448)
Q Consensus 150 --------~~~~~~~~~~Yi~~l~~~~~~~~~------~~~lkvvvD~~~G~~~~~~~~il-~~lg~~~-~~i~~~pd~~ 213 (448)
.....+..+.|++.+.+.++.... ..++|||+||+||+++.+++++| +.+|+.+ +.+|+.||+.
T Consensus 176 ~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~~~~~~~~~~~lkIv~D~~nG~~~~~~~~iL~~~lg~~~~~~~~~~~d~~ 255 (561)
T 3pmg_A 176 LENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLED 255 (561)
T ss_dssp CTTCSSCEEEEEECSSHHHHHHHHTTSCHHHHHHHHHSTTCCCEEEECTTSTTHHHHHHHHTTTTCCCGGGEESCSCCTT
T ss_pred HHHCCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf 44404676079823099999999863487777776414678469995477611333365538761884204676455699
Q ss_pred CC--CCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC---CCCCCCCCCC
Q ss_conf 57--744221013777642002343036753155210001332237553311356777765532002---2343332211
Q gi|254780544|r 214 NI--NLDCGSTNVLSLQRKVHEVRADIGIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLL---RGNGIVTTVM 288 (448)
Q Consensus 214 ~~--~~~~~~~~~~~l~~~v~~~~ad~Gia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~~~~---~~~~vv~~v~ 288 (448)
|+ +|+|.++++..+.+.+++.++|+|+++||||||++++|++|++++++++++|++.++++.... ....||.|++
T Consensus 256 f~~~~p~p~~~~~~~l~~~v~~~~aDlgia~DgDaDR~~ivd~~G~~i~~~~~~all~~~~l~~~~~~~~~~~~vv~t~~ 335 (561)
T 3pmg_A 256 FGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMP 335 (561)
T ss_dssp GGGSCCCCSTTTTHHHHHHHHTSCCSEEEEECTTSSCEEEEEGGGCBCCHHHHHHHHHHTGGGSHHHHHHCCCCEEEETT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 88677899822499999988601764454205888568999689728716517999999999733531488746986666
Q ss_pred CCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH
Q ss_conf 36004443200121111123321101111102897001346623653010001444233202466777558888999986
Q gi|254780544|r 289 SNIGLERFIAGLGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKPVSTICHC 368 (448)
Q Consensus 289 ss~~i~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~le~l~~~~~~l~~l~~~ 368 (448)
||.+++++++++|+++++|+||||||.+.|++.++.+|||+|||++ ++|.+++||+++++++|++++++++++++++++
T Consensus 336 ss~~i~~ia~~~g~~v~~t~tG~k~i~~~~~~~~~~~ggEesgg~~-~~~~~~kDgi~a~l~~le~l~~~~k~l~~~l~e 414 (561)
T 3pmg_A 336 TSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTG-SDHIREKDGLWAVLAWLSILATRKQSVEDILKD 414 (561)
T ss_dssp SCTHHHHHHHTSSSCEEEECSSHHHHHHHHHTTCCSEEEETTTEEE-ETTSSSCCHHHHHHHHHHHHHHHCSCHHHHHHH
T ss_pred CCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCEE-CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 5807777898659369871774699999998459779885257262-156899838999999999999839899999998
Q ss_pred HH-HCCCEEE-EEECCCCCCCCHHHHHHHHHHHH------------------------------------------HHCC
Q ss_conf 56-4230000-00056765115589999987655------------------------------------------4307
Q gi|254780544|r 369 FE-EYPQFLR-SVSVKDTSILNSSSIVQAIADAE------------------------------------------SELR 404 (448)
Q Consensus 369 l~-~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~------------------------------------------~~~~ 404 (448)
+. +|+.+.. ..............+++.+.... -.++
T Consensus 415 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~dglk~~~~ 494 (561)
T 3pmg_A 415 HWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFA 494 (561)
T ss_dssp HHHHHCEEEEEEEEEEEECHHHHHHHHHHHHHHHHSTTSTTCEEEETTEEEEEEEEEECCEECTTTCCEECCCCEEEEET
T ss_pred HHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 88883875466314456778889999999998652133236400245431567651233345754576667775999977
Q ss_pred CCCEEEEECCCCCC---EEEEEEECCC
Q ss_conf 88659996779822---7999961599
Q gi|254780544|r 405 GIDRLIVRASGTES---LIRIMAEGDD 428 (448)
Q Consensus 405 ~~~w~liRpSgTEp---~iriy~Ea~~ 428 (448)
+.+|++|||||||| ++|||+||.+
T Consensus 495 dg~wi~vRpSGTEP~~~~iRiY~Ea~~ 521 (561)
T 3pmg_A 495 DGSRIIFRLSGTGSAGATIRLYIDSYE 521 (561)
T ss_dssp TSCEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred CCEEEEEECCCCCCCCCEEEEEEEECC
T ss_conf 985999985678899812999998779
No 9
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00 E-value=0 Score=632.91 Aligned_cols=433 Identities=23% Similarity=0.342 Sum_probs=362.8
Q ss_pred CCCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE-CC
Q ss_conf 96520-33586015506877889999999999999997237998389996687797999999999999789879996-26
Q gi|254780544|r 1 MKRRF-FGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFIL-GP 78 (448)
Q Consensus 1 m~r~l-FGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~-g~ 78 (448)
|++.| |||+||||++|. +|||+++.++|+||++++..+ .+++|+||||+|++|++|++++++||+++|++|+++ |.
T Consensus 8 ~~~~i~FGT~GiRG~~~~-~lt~~~~~~~~~a~~~~l~~~-~~~~VvVG~DtR~ss~~l~~a~~~gl~a~G~~V~~~~G~ 85 (464)
T 1tuo_A 8 MSAPIRFGTEGFRGVIAR-EFTFATLHRLAEAYGRHLLER-GGGLVVVGHDTRFLADAFARALSGHLAGMGLKVVLLKGP 85 (464)
T ss_dssp CCCCCCCCSSSEEEEBTT-TBCHHHHHHHHHHHHHHHHHT-TCCEEEEEECSSTTHHHHHHHHHHHHHHHTCEEEEESSS
T ss_pred CCCCCCCCCCCCCEECCC-CCCHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 777877408871412387-659999999999999999872-959899996996449999999999999769979987897
Q ss_pred CCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 78089999998719925898865477752012564036545678357899999961566433445433222111354256
Q gi|254780544|r 79 IPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHD 158 (448)
Q Consensus 79 ~ptP~l~~a~~~~~~~gGI~iTaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (448)
+|||+++|+++++++++||||||||||++|||+||++++|.++.++.+++|+..+......... ... ..+..+
T Consensus 86 ~pTP~l~~~v~~~~~~~gi~itaSHnp~~~ngiK~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~------~~~-~~~~~~ 158 (464)
T 1tuo_A 86 VPTPLLSFAVRHLKAAGGAMLTASHNPPQYLGVKFKDATGGPIAQEEAKAIEALVPEEARALEG------AYE-TLDLRE 158 (464)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCTTSCTTEEEEEEEETTTEECCHHHHHHHHHTCCSCCCCCCC------CCE-EECCHH
T ss_pred CCHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC------CCE-ECCHHH
T ss_conf 7779999999836998448985689974755631034447767669999998631122320268------611-113166
Q ss_pred HHHHHHHHCCCCH-HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC---CHHHHHHHHHC
Q ss_conf 6688776326310-211896699984466543333222123332222--22232223557744221---01377764200
Q gi|254780544|r 159 RYIEHVKRTLPRD-VTLQGLRIVVDCANGASYKVAPEVFWELGADVV--VIGDKPNGININLDCGS---TNVLSLQRKVH 232 (448)
Q Consensus 159 ~Yi~~l~~~~~~~-~~~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~--~i~~~pd~~~~~~~~~~---~~~~~l~~~v~ 232 (448)
.|.+.+...++.. ....++++++||+||++..+++++|+.+++++. .++..|++.|++.+|.+ .....+...++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 238 (464)
T 1tuo_A 159 AYFEALKAHLDLKALSGFSGVLYHDSMGGAGAGFLKGFLRHVGLEIPVRPIREEPHPLFHGVNPEPIPKNLGVTLAVLGP 238 (464)
T ss_dssp HHHHHHHTTSCHHHHTTCCSCEEEECTTSTTTTHHHHHHHHTTCCCCEEEESCSCCTTGGGSCSCCSGGGCHHHHHHHTT
T ss_pred HHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 66654201332222024660696034345420456899875165432355110688998988889641337999999877
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 23430367531552100013322375533113567777655320022343332211360044432001211111233211
Q gi|254780544|r 233 EVRADIGIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDR 312 (448)
Q Consensus 233 ~~~ad~Gia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k 312 (448)
+.++|+|++|||||||++++|++|+++++|++++++++++++.. +...++.++.+|..++++++++|.++++|+||+|
T Consensus 239 ~~~adlgia~DgD~DR~~~vd~~g~~~~~d~i~~l~~~~~~~~~--~~~~~~~~~~~s~~~~~~~~~~g~~~~~t~~G~k 316 (464)
T 1tuo_A 239 ETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYRFRKG--HRGRAVKNFAVTWLLDRLGERLGFGVTTTPVGFK 316 (464)
T ss_dssp CCTTCEEEEECTTSSBEEEEETTTEEECHHHHHHHHHHHHHHTT--CCSEEEEETTSCTHHHHHHHHHTCCEEEECSSHH
T ss_pred HHCCEEEEEECCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHH
T ss_conf 51763777763788558999289808874999999999999747--6886430012577878999970873277334189
Q ss_pred CHHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEE---EEEECCCCCCCCH
Q ss_conf 0111110289700134662365301000144423320246677755888899998656423000---0000567651155
Q gi|254780544|r 313 YIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKPVSTICHCFEEYPQFL---RSVSVKDTSILNS 389 (448)
Q Consensus 313 ~i~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~le~l~~~~~~l~~l~~~l~~~~~~~---~~~~~~~~~~~~~ 389 (448)
|+++.|.+.++.||+|+|||++|+++.+++||++++++++++++.++++++++++.++.++... .++.++.+.....
T Consensus 317 ~i~~~~~~~~~~~~~e~sg~~~~~~~~~~~D~i~~~l~il~~l~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 396 (464)
T 1tuo_A 317 WIKEEFLKGDCFIGGEESGGVGYPEHLPERDGILTSLLLLESVAATGKDLAEQFKEVEALTGLTHAYDRLDLPLKAPLDL 396 (464)
T ss_dssp HHHHHHTTTCEEEEECTTSBEEETTTEEEECHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHTCCCEEEEEC---------
T ss_pred HHHHHHHCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHH
T ss_conf 99999860894896526587534752557742779999999999829999999999898728762010014422226788
Q ss_pred HHHHH--HHHHHH----HHCC------CCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 89999--987655----4307------8865999677982279999615998999999999999987
Q gi|254780544|r 390 SSIVQ--AIADAE----SELR------GIDRLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVIP 444 (448)
Q Consensus 390 ~~i~~--~~~~~~----~~~~------~~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~i~ 444 (448)
..+.+ .+.... ..+| +.+|++||||||||++|||+||.|++.+++++++++++|+
T Consensus 397 ~~~~~~~~~~~~~~~~i~~iDgv~~~~~~g~~lvRpSGTEp~vRvyaEa~~~e~a~~l~~~~~~lV~ 463 (464)
T 1tuo_A 397 TPFREPRPLAGLTPKGVDTLDGVKWLYEEAWVLFRASGTEPVVRIYVEAQSPELVRALLEEARKLVE 463 (464)
T ss_dssp ------CCCTTCCEEEEECSSSEEEEETTEEEEEECC-----CEEEEEESSHHHHHHHHHHHHTTTC
T ss_pred HHHHCCHHHCCCCCCCEEECCEEEEECCCEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHCC
T ss_conf 8642405343676332450451899829989999822980068999985999999999999998709
No 10
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=100.00 E-value=0 Score=483.29 Aligned_cols=402 Identities=22% Similarity=0.273 Sum_probs=294.5
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECC---CCCHHHHHHHHHHH-HHHCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 9999999999723799838999668---77979999999999-9978987999626780899999987199258988654
Q gi|254780544|r 27 RIGIAVGYLFRGKKKHRRVVIGKDT---RLSGYMLENSLVAG-FTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISAS 102 (448)
Q Consensus 27 ~i~~a~~~~~~~~~~~~~vvVg~D~---R~~s~~~~~~~~~g-l~~~G~~V~~~g~~ptP~l~~a~~~~~~~gGI~iTaS 102 (448)
++.++++.|++...+...++++||+ |..+..+...++.. +.+ .+ ++....++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~YgtagfR~~a~~l~~v~~~~g~~a--------------~l-~s~~~~g~~~GImITAS 66 (544)
T 2dka_A 2 SIEQTLSQYLPSHPKPQGVTFTYGTAGFRMKADKLDYVTFTVGIIA--------------SL-RSKYLQGKTVGVMITAS 66 (544)
T ss_dssp CHHHHHHTTGGGCCCCSSCCCCCBTTBEEEEGGGCHHHHHHHHHHH--------------HH-HHHHTTTCEEEEEECCC
T ss_pred CHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH--------------HH-HHHHHCCCCEEEEECCC
T ss_conf 6689999999836998996574078533364244548999999999--------------99-87875797678998147
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC------------------------------------
Q ss_conf 77752012564036545678357899999961566433445433------------------------------------
Q gi|254780544|r 103 HNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSCYDS------------------------------------ 146 (448)
Q Consensus 103 HNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~------------------------------------ 146 (448)
|||++|||+|+|+++|.++.++.++.|+++++............
T Consensus 67 HNP~~dNG~Kv~~~~G~~l~~~~e~~i~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~vg~DtR~ss~ 146 (544)
T 2dka_A 67 HNPPEDNGVKVVDPLGSMLESSWEKYATDLANASPSPSNDSEGEKNSLVEVIKNLVSDLKIDLSIPANVVIARDSRESSP 146 (544)
T ss_dssp -CCTTEEEEEEECTTSSBCCGGGHHHHHHHHHSBSCC------CTTBHHHHHHHHHHHTTCCTTSCEEEEEEECSCTTHH
T ss_pred CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHH
T ss_conf 78810677999889989888699999999872645443321101456788998776543012256772587422776729
Q ss_pred --------------------CCCCC---------------CCCCHHHHHHHHHHHCCCC-----HHHCCCCEEEEEECCC
Q ss_conf --------------------22211---------------1354256668877632631-----0211896699984466
Q gi|254780544|r 147 --------------------IGHAK---------------RVDGVHDRYIEHVKRTLPR-----DVTLQGLRIVVDCANG 186 (448)
Q Consensus 147 --------------------~~~~~---------------~~~~~~~~Yi~~l~~~~~~-----~~~~~~lkvvvD~~~G 186 (448)
+|..+ ......+.|++.+.+.+.. ....++++|++||+||
T Consensus 147 ~l~~a~~~gl~~~~g~~v~d~g~vtTP~l~~~~~~~n~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~iv~d~~nG 226 (544)
T 2dka_A 147 ALSMATIDGFQSVPNTKYQDFGLFTTPELHYVTRTLNDPDFGKPTEDGYYSKLAKSFQEIYTICESNNEKIDITIDAANG 226 (544)
T ss_dssp HHHHHHHHHHHTSSSEEEEEEEECCHHHHHHHHHHHHCGGGCCSSHHHHHHHHHHHHHHHHTC-----CCEEEEEECTTS
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 99999999988605980787233265435554430372220771167899999999999873222025783498745776
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC---C-CCCCCCCCCCCCCHHHHH---HHHHCCCCCCEEEEECCCCCCCCCCC----CC
Q ss_conf 5433332221233322222223---2-223557744221013777---64200234303675315521000133----22
Q gi|254780544|r 187 ASYKVAPEVFWELGADVVVIGD---K-PNGININLDCGSTNVLSL---QRKVHEVRADIGIALDGDGDRVIIVD----EK 255 (448)
Q Consensus 187 ~~~~~~~~il~~lg~~~~~i~~---~-pd~~~~~~~~~~~~~~~l---~~~v~~~~ad~Gia~DgD~DR~~ivd----~~ 255 (448)
+++..++++|+++|++++.++. . +++.+++++|++++...+ .+.+++.++|+|+++||||||+++++ ++
T Consensus 227 ~g~~~~~~ll~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~a~DgDaDRl~~~~~~~~~~ 306 (544)
T 2dka_A 227 VGAPKIQELLEKYLHKEISFTVVNGDYKQPNLLNFDCGADYVKTNQKLPKNVKPVNNKLYASFDGDADRLICYYQNNDNK 306 (544)
T ss_dssp THHHHHHHHHHHHSTTTEEEEEESCCTTCGGGTTSSCSHHHHHHHCSCCTTCCCCBTCCEEEECTTSCCEEEEEECTTSC
T ss_pred CCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCC
T ss_conf 30789999999837863477204566899989889988542125899999876348866543678755447875166556
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCC--------CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEECC
Q ss_conf 37553311356777765532002234--------3332211360044432001211111233211011111028970013
Q gi|254780544|r 256 GAIVNGDQIMALIAREWMSHSLLRGN--------GIVTTVMSNIGLERFIAGLGLSLKRTEVGDRYIMEYMKNNGFNVGG 327 (448)
Q Consensus 256 G~~i~~d~~~~lla~~ll~~~~~~~~--------~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~~g~ 327 (448)
|++++||++++|+++|+++.....+. .|.++++++.+++.+++++|+++++|+|||||+.++|++.++.+||
T Consensus 307 ~~~l~Gd~i~~Lla~~l~~~~~~~~~~~~~~~~~~V~t~~~s~~~~~~i~~~~g~~~~~t~tG~k~i~~~~~~~~~~~~~ 386 (544)
T 2dka_A 307 FKLLDGDKLSTLFALFLQQLFKQIDPTKISLNIGVVQTAYANGSSTKYVEDVLKIPVRCTPTGVKHLHHEAENFDIGVYF 386 (544)
T ss_dssp EEEECHHHHHHHHHHHHHHHHTTSCTTTCCCCEEEEECTTSCHHHHHHHHHTSCCCEEECCSSHHHHHHHHTTSSEEEEE
T ss_pred CEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCEEE
T ss_conf 42526999999999999985131577654567770799834766899999976982899815528899998741200005
Q ss_pred CCCCEEEE--E--------CCCCCCCCCCCCCHHHHHHH----------------------HCCCCHHHHHHHHHHCCCE
Q ss_conf 46623653--0--------10001444233202466777----------------------5588889999865642300
Q gi|254780544|r 328 EQSGHIIL--S--------DYGSTGDGLVAALQVLRYIK----------------------QYDKPVSTICHCFEEYPQF 375 (448)
Q Consensus 328 E~sg~~~~--~--------~~~~~~Dgi~a~l~~le~l~----------------------~~~~~l~~l~~~l~~~~~~ 375 (448)
|+|||..+ + .+.+.+|++++++++|++++ ..+.+++++.+.++++|+.
T Consensus 387 E~~ghg~~~~~~~~~~~~~~~~~~~d~~~~a~~~l~~~~~~~~~~~Gd~l~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~ 466 (544)
T 2dka_A 387 EANGHGTVIFNPEAEKKIFDYKPNNDNEAKAIKVLQNFSQLINQTVGDAISDLLAVLIVVHYLKLSPSDWDNEYTDLPNK 466 (544)
T ss_dssp CTTSCEEEEECHHHHHHHHHCCCSSHHHHHHHHHHHHHHHHSCSSSCCHHHHHHHHHHHHHHTTCCHHHHHTTSCCCCEE
T ss_pred EECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH
T ss_conf 21486358604102543102324656899999999999998642004169999999999875499999999875540011
Q ss_pred EEEEECCCCCCCC----------HHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 0000056765115----------58999998765543078865999677982279999615998999999999999987
Q gi|254780544|r 376 LRSVSVKDTSILN----------SSSIVQAIADAESELRGIDRLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVIP 444 (448)
Q Consensus 376 ~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~~~~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~i~ 444 (448)
..++++.+....+ ....+..+......++ .+|++||||||||++|||+||++++.++++++++.++|+
T Consensus 467 ~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~idgi~~~~~-~g~~~vRpSGTEP~iRiY~Ea~s~~~a~~l~~~~~~lvk 544 (544)
T 2dka_A 467 LVKVIVPDRSIFKTTNAERTLVEPKGMQDEIDKLVAQYP-NGRSFVRASGTEDAVRVYAEADTQNNVEELSKAVSELVK 544 (544)
T ss_dssp EEEC-------CCCCTTTC-CC-CTTHHHHHHHHHTTST-TCEEEEEEC----CEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred CCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC-CEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHC
T ss_conf 015442546755322677651354223233143999829-889999747982026999986999999999999999649
No 11
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=99.41 E-value=4.4e-13 Score=98.81 Aligned_cols=78 Identities=23% Similarity=0.425 Sum_probs=61.7
Q ss_pred HHHHCCCEEEEEECCCCCCC----------CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHH
Q ss_conf 65642300000005676511----------55899999876554307886599967798227999961599899999999
Q gi|254780544|r 368 CFEEYPQFLRSVSVKDTSIL----------NSSSIVQAIADAESELRGIDRLIVRASGTESLIRIMAEGDDLSRIKRIVD 437 (448)
Q Consensus 368 ~l~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~ 437 (448)
.|.++|+...+++++++..+ +...+++.+++....+. .+|++||||||||++|||+||.+++.++++++
T Consensus 9 ly~~lPq~linV~V~dk~~~~~~~~~~~~~~p~~~q~~Idgi~~~~~-~gr~lvRpSgTEp~iRi~vE~~~~~~~~~~~~ 87 (112)
T 1wjw_A 9 IYVDLPNRQLKVKVADRRVISTTDAERQAVTPPGLQEAINDLVKKYT-LARAFVRPSGTEDIVRVYAEANSQESADRLAY 87 (112)
T ss_dssp CCCCCCEEEEEECCCCSSSSTTSCCCCSSSSSTTHHHHHHHHHHHSS-SEEEEEECSSSSSSEEEEEEESSHHHHHHHHH
T ss_pred HHHHCCCCEEEEECCCCCHHHCHHHHHHHCCCHHHHHHHHHHHEECC-CEEEEEEECCCCCEEEEEEEECCHHHHHHHHH
T ss_conf 86645834566672782032041788886087989999998762468-76899987799857999996399999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999998752
Q gi|254780544|r 438 DLAKVIPMI 446 (448)
Q Consensus 438 ~~~~~i~~i 446 (448)
++.++|+++
T Consensus 88 ~i~~~v~~~ 96 (112)
T 1wjw_A 88 EVSLLVFQL 96 (112)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 12
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=98.76 E-value=4.7e-09 Score=73.90 Aligned_cols=50 Identities=28% Similarity=0.426 Sum_probs=45.1
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHHC
Q ss_conf 838999668779799999999999978-98799962678089999998719
Q gi|254780544|r 43 RRVVIGKDTRLSGYMLENSLVAGFTAA-GMDAFILGPIPSPAVAMLTRSLR 92 (448)
Q Consensus 43 ~~vvVg~D~R~~s~~~~~~~~~gl~~~-G~~V~~~g~~ptP~l~~a~~~~~ 92 (448)
.+|+||+|+|++|++++++++.|+.+. |++|+++|.+|||+++|.++..+
T Consensus 133 ~~v~vg~DtR~ss~~l~~a~~~gl~~~~g~~v~d~g~vtTP~l~~~~~~~n 183 (544)
T 2dka_A 133 ANVVIARDSRESSPALSMATIDGFQSVPNTKYQDFGLFTTPELHYVTRTLN 183 (544)
T ss_dssp EEEEEEECSCTTHHHHHHHHHHHHHTSSSEEEEEEEECCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCC
T ss_conf 725874227767299999999998860598078723326543555443037
No 13
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=91.10 E-value=0.65 Score=23.64 Aligned_cols=58 Identities=22% Similarity=0.436 Sum_probs=35.2
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCC-----CHHHHHHH----HHHHCCCEEEEEEEC
Q ss_conf 8389996687797999999999999789879996267-----80899999----987199258988654
Q gi|254780544|r 43 RRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPI-----PSPAVAML----TRSLRADVGVMISAS 102 (448)
Q Consensus 43 ~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~-----ptP~l~~a----~~~~~~~gGI~iTaS 102 (448)
++|+||.|. .+-.++..+..-|.+.|.+|.|+|.- --|-..+. +....++-||.|..|
T Consensus 2 kkI~igsDh--aG~~lK~~l~~~L~~~g~ev~D~G~~~~~~~DYpd~a~~~a~~v~~~~~~~GIliCGt 68 (149)
T 2vvr_A 2 KKIAFGCDH--VGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAGGEVDGGILICGT 68 (149)
T ss_dssp CEEEEEECT--TGGGGHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESS
T ss_pred CEEEEEECC--HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 879997587--0799999999999987998997899835577840789999998605775425895589
No 14
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.80A {Aeropyrum pernix K1}
Probab=90.99 E-value=0.7 Score=23.44 Aligned_cols=59 Identities=19% Similarity=0.256 Sum_probs=45.9
Q ss_pred CCCCCEEEE---ECCCCCHHHHHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 799838999---668779799999999999978987999626-780899999987199258988654
Q gi|254780544|r 40 KKHRRVVIG---KDTRLSGYMLENSLVAGFTAAGMDAFILGP-IPSPAVAMLTRSLRADVGVMISAS 102 (448)
Q Consensus 40 ~~~~~vvVg---~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~-~ptP~l~~a~~~~~~~gGI~iTaS 102 (448)
...++|++| .|.+..+ +..++..|..+|.+|+++|. +|...+--++++.+++ .|.++++
T Consensus 16 ~rk~rvvia~~~~D~HdiG---~~~va~~l~~~G~eV~~LG~~~p~e~~v~~a~~~~~d-~v~lS~~ 78 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRG---AKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVD-VIGVSIL 78 (161)
T ss_dssp CCSCEEEEEEESSSSCCHH---HHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCS-EEEEEES
T ss_pred CCCCEEEEEECCCCHHHHH---HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCC-EEEEECC
T ss_conf 8898799980498624788---9999999997898899789778999999999866998-9998557
No 15
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM- barrel, rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=90.96 E-value=0.71 Score=23.42 Aligned_cols=59 Identities=24% Similarity=0.412 Sum_probs=45.9
Q ss_pred CCCEEEE---ECCCCCHHHHHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 9838999---668779799999999999978987999626-78089999998719925898865477
Q gi|254780544|r 42 HRRVVIG---KDTRLSGYMLENSLVAGFTAAGMDAFILGP-IPSPAVAMLTRSLRADVGVMISASHN 104 (448)
Q Consensus 42 ~~~vvVg---~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~-~ptP~l~~a~~~~~~~gGI~iTaSHN 104 (448)
.++|++| .|.+..+ ...++..|...|.+|+++|. +|...+--++++.+++ .|.++.|..
T Consensus 3 k~kVvi~~~~~D~H~lG---~~~va~~l~~~G~~V~~LG~~~p~e~iv~~~~~~~~d-~V~iS~~~~ 65 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVG---NKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKAD-AILVSSLYG 65 (137)
T ss_dssp CCEEEEEEETTCCCCHH---HHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCS-EEEEEECSS
T ss_pred CCEEEEEECCCCHHHHH---HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCC-EEEEEECCC
T ss_conf 98799994698745899---9999999998798799778666999999999983998-788761134
No 16
>2ehp_A AQ_1627 protein; putative protein, NPPSFA, national project on protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eiu_A
Probab=90.48 E-value=0.78 Score=23.15 Aligned_cols=105 Identities=20% Similarity=0.354 Sum_probs=68.7
Q ss_pred CCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHHHC-CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHH
Q ss_conf 033586-01550687788999999999999999723-7998389996687797999999999999789879996267808
Q gi|254780544|r 5 FFGTDG-IRGKSNTFPITPNFMMRIGIAVGYLFRGK-KKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPIPSP 82 (448)
Q Consensus 5 lFGt~G-iRG~~~~~~~t~~~v~~i~~a~~~~~~~~-~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~ptP 82 (448)
||-..| +||+.+...+|-|+..|+|.|+++.++-. ....++.+=-|..+ +..+++.|+|-.|-+|+. |.
T Consensus 4 ~~~~e~kv~G~pG~YPLTaENL~R~GLALCtL~~l~ke~eeP~l~i~elNF----ltmalsVGFM~gGG~V~v-gk---- 74 (126)
T 2ehp_A 4 IFTHEGKVEGVPGNYPLTAENLFRIGLALCTLWILDKEIEEPTLSIPETNF----VTLALSVGFMNAGGSVNV-GK---- 74 (126)
T ss_dssp CSCTTSCEEECTTSTTSSHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCSH----HHHHHHHHHHHTTCEEEE-SS----
T ss_pred EECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCE----EEEEEEEEEECCCCCEEE-CC----
T ss_conf 241267050367866322889999889999999877653076056302330----124655667615751674-36----
Q ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 999999871992589886547775201256403654567835789999996156
Q gi|254780544|r 83 AVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDD 136 (448)
Q Consensus 83 ~l~~a~~~~~~~gGI~iTaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~ 136 (448)
++++-+...- .+.--+.| .++.+.+.+++|.++...
T Consensus 75 ---------~gd~~lfl~k----GeidvL~F-----~gL~e~D~kKLEsILFgR 110 (126)
T 2ehp_A 75 ---------GGDIKLFLQK----GEIYVLEF-----QPLSETDIKKLESILFGR 110 (126)
T ss_dssp ---------CCSEEEEEEC----SSSEEEEE-----ESCCHHHHHHHHHHHTSS
T ss_pred ---------CCCEEEEEEC----CCEEEEEE-----CCCCHHHHHHHHHHHHCC
T ss_conf ---------7618999751----85869997-----488756678888886336
No 17
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=89.52 E-value=0.93 Score=22.68 Aligned_cols=57 Identities=25% Similarity=0.496 Sum_probs=34.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCC------CHHHHHHH----HHHHCCCEEEEEEEC
Q ss_conf 389996687797999999999999789879996267------80899999----987199258988654
Q gi|254780544|r 44 RVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPI------PSPAVAML----TRSLRADVGVMISAS 102 (448)
Q Consensus 44 ~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~------ptP~l~~a----~~~~~~~gGI~iTaS 102 (448)
+|+||.| +.+..++..+..-|.+.|.+|+|+|.. .-|..... +....++-||.+..|
T Consensus 5 KI~igsD--haG~~lK~~l~~~L~~~g~ev~D~G~~~~~~~~dYpd~a~~va~~v~~~~~~~GIliCGt 71 (162)
T 2vvp_A 5 RVYLGAD--HAGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVADPGSLGIVLGGS 71 (162)
T ss_dssp EEEEEEC--HHHHHHHHHHHHHHHHTTCEEEECSCCSCCTTCCHHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred EEEEEEC--CCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 9999838--807999999999999879989967998666778725899998887436877779998688
No 18
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=88.14 E-value=1.2 Score=22.09 Aligned_cols=21 Identities=29% Similarity=0.340 Sum_probs=13.6
Q ss_pred CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 133223755331135677776
Q gi|254780544|r 251 IVDEKGAIVNGDQIMALIARE 271 (448)
Q Consensus 251 ivd~~G~~i~~d~~~~lla~~ 271 (448)
++-..|-++.++.+-.++..|
T Consensus 226 I~PgHGpi~r~~~~~~~~~~y 246 (414)
T 2q9u_A 226 ILSAHGVSWRGDAMGLAIAEY 246 (414)
T ss_dssp EEESSSCBEEHHHHHHHHHHH
T ss_pred EEECCCCEECCCHHHHHHHHH
T ss_conf 980896724476378999999
No 19
>1o1x_A Ribose-5-phosphate isomerase RPIB; TM1080, structural genomics, JCSG, PSI, protein structure initiative; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=88.10 E-value=1.2 Score=22.08 Aligned_cols=58 Identities=19% Similarity=0.310 Sum_probs=33.4
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCC-----HHHHHHH----HHHHCCCEEEEEEEC
Q ss_conf 83899966877979999999999997898799962678-----0899999----987199258988654
Q gi|254780544|r 43 RRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPIP-----SPAVAML----TRSLRADVGVMISAS 102 (448)
Q Consensus 43 ~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~p-----tP~l~~a----~~~~~~~gGI~iTaS 102 (448)
=+|+||.|. .+-.++..+..-|.+.|.+|.|+|..+ -|...+. +....++-||.+..|
T Consensus 13 MKI~igsDH--aG~~lK~~l~~~L~~~g~ev~D~G~~~~~~~DYpd~a~~va~~V~~~~~~~GIliCGt 79 (155)
T 1o1x_A 13 VKIAIASDH--AAFELKEKVKNYLLGKGIEVEDHGTYSEESVDYPDYAKKVVQSILSNEADFGILLCGT 79 (155)
T ss_dssp CEEEEEECS--TTHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSCSEEEEEESS
T ss_pred EEEEEEECC--HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 399997487--1799999999999987998997899987777831789999999734776347996489
No 20
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=88.07 E-value=1.2 Score=22.06 Aligned_cols=60 Identities=13% Similarity=0.202 Sum_probs=40.9
Q ss_pred CCCCEEEEECCCCC-HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH-CCCEEEEEEE
Q ss_conf 99838999668779-7999999999999789879996267808999999871-9925898865
Q gi|254780544|r 41 KHRRVVIGKDTRLS-GYMLENSLVAGFTAAGMDAFILGPIPSPAVAMLTRSL-RADVGVMISA 101 (448)
Q Consensus 41 ~~~~vvVg~D~R~~-s~~~~~~~~~gl~~~G~~V~~~g~~ptP~l~~a~~~~-~~~gGI~iTa 101 (448)
..++|+|-|++... .+.++++++.++.+.|++|..+....++-....+..+ ++ .++.+.+
T Consensus 3 ~~kkV~IvY~S~tGnT~~~A~~Ia~gl~~~gv~v~~~~~~~~~~~~~~~~~l~~~-d~i~~G~ 64 (159)
T 3fni_A 3 AETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAAVDLQELRELVGRC-TGLVIGM 64 (159)
T ss_dssp CCCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSCCCHHHHHHHHHTE-EEEEEEC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCC-CEEEECC
T ss_conf 7888999999998339999999999998629836999855578778899865029-9899837
No 21
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=84.28 E-value=1.8 Score=20.86 Aligned_cols=50 Identities=14% Similarity=0.101 Sum_probs=33.7
Q ss_pred CCCEEEEE---CCCCCHHHHHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHHHCCC
Q ss_conf 98389996---68779799999999999978987999626-7808999999871992
Q gi|254780544|r 42 HRRVVIGK---DTRLSGYMLENSLVAGFTAAGMDAFILGP-IPSPAVAMLTRSLRAD 94 (448)
Q Consensus 42 ~~~vvVg~---D~R~~s~~~~~~~~~gl~~~G~~V~~~g~-~ptP~l~~a~~~~~~~ 94 (448)
.++|+++. |.+..+ +..++.-|...|.+|+++|. +|...+--++.+.+++
T Consensus 92 ~~~vl~~~~~gd~H~lG---~~~va~~l~~~G~~V~~LG~~~p~e~~~~~~~~~~~d 145 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIG---HRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGE 145 (215)
T ss_dssp CCEEEEEECTTCCCCHH---HHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTS
T ss_pred CCCEEEEECCCCHHHHH---HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCC
T ss_conf 77469985489888899---9999999997799699888999999999999973998
No 22
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix bundle (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=80.35 E-value=2.6 Score=19.95 Aligned_cols=51 Identities=16% Similarity=0.232 Sum_probs=27.7
Q ss_pred CCEEEEEECCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE
Q ss_conf 96699984466----5433332221233322222223222355774422101377764200234303
Q gi|254780544|r 176 GLRIVVDCANG----ASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADI 238 (448)
Q Consensus 176 ~lkvvvD~~~G----~~~~~~~~il~~lg~~~~~i~~~pd~~~~~~~~~~~~~~~l~~~v~~~~ad~ 238 (448)
+-+|++-|..| -+...+..+|+..|.+|+.+... . ..+.+.+.+++.++|+
T Consensus 123 ~g~vv~~t~~gd~H~lG~~~va~~l~~~G~~V~~LG~~-------~-----p~e~i~~~v~~~~~d~ 177 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD-------V-----PAEEVLAAVQKEKPIM 177 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE-------C-----CSHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCC-------C-----CHHHHHHHHHHHCCCE
T ss_conf 88489837999801789999999999879938978998-------9-----9999999999829998
No 23
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi strain cl brener} PDB: 3k7s_A* 3k7o_A* 3k8c_A*
Probab=78.41 E-value=3 Score=19.57 Aligned_cols=31 Identities=26% Similarity=0.432 Sum_probs=14.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 389996687797999999999999789879996
Q gi|254780544|r 44 RVVIGKDTRLSGYMLENSLVAGFTAAGMDAFIL 76 (448)
Q Consensus 44 ~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~ 76 (448)
+|+||.|.+ +-.++..+..-|...|.+|.|+
T Consensus 24 kI~IgsDHa--G~~lK~~l~~~L~~~g~ev~D~ 54 (179)
T 3k7p_A 24 RVAIGTDHP--AFAIHENLILYVKEAGDEFVPV 54 (179)
T ss_dssp EEEEEECTG--GGGGHHHHHHHHHHTCTTEEEE
T ss_pred CEEEEECCH--HHHHHHHHHHHHHHCCCEEEEC
T ss_conf 189982862--8999999999999869979975
No 24
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=76.48 E-value=3.4 Score=19.23 Aligned_cols=87 Identities=21% Similarity=0.283 Sum_probs=56.9
Q ss_pred CCCEEEEE---CCCCCHHHHHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHHHCCCEEEEEEECCCCC-----------
Q ss_conf 98389996---68779799999999999978987999626-7808999999871992589886547775-----------
Q gi|254780544|r 42 HRRVVIGK---DTRLSGYMLENSLVAGFTAAGMDAFILGP-IPSPAVAMLTRSLRADVGVMISASHNPY----------- 106 (448)
Q Consensus 42 ~~~vvVg~---D~R~~s~~~~~~~~~gl~~~G~~V~~~g~-~ptP~l~~a~~~~~~~gGI~iTaSHNP~----------- 106 (448)
.++||+|. |.+--+ ++.+...|.++|.+|+|+|. +|...+--++++.+++ -|.+++.--+.
T Consensus 98 ~g~ivi~tV~GD~HdIG---KniV~~~l~~~G~~VidLG~~v~~~~~v~~~~~~~~d-~iglS~llt~s~~~m~~~~~~l 173 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIG---KNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNAD-LIGLSGLITPSLDEMVNVAKEM 173 (579)
T ss_dssp SCEEEEEEBTTCCCCHH---HHHHHHHHHTTTCEEEECCSSBCHHHHHHHHHHHTCS-EEEEECCSTHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHH---HHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCC-EEEEECCCHHHHHHHHHHHHHH
T ss_conf 88499995798601567---8999999970990799457788999999999984997-8999533477799999999999
Q ss_pred CCEEE--EEECCCCCCCCHHHHH-HHHHHH
Q ss_conf 20125--6403654567835789-999996
Q gi|254780544|r 107 QDNGI--KLFGPDGYKVSTDIED-RIETLL 133 (448)
Q Consensus 107 ~~nGi--K~~~~~G~~i~~~~~~-~Ie~~~ 133 (448)
+..|+ ++.- .|.++++.... +|...+
T Consensus 174 ~~~g~~~~v~v-GGa~~t~~~~a~kI~p~Y 202 (579)
T 3bul_A 174 ERQGFTIPLLI-GGATTSKAHTAVKIEQNY 202 (579)
T ss_dssp HHTTCCSCEEE-ESTTCCHHHHHHHTGGGC
T ss_pred HHHCCCCCEEE-CCCCCCHHHHHHHHCCCC
T ss_conf 97289871783-264056788777642577
No 25
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization, X-RAY crystallography; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=73.53 E-value=4 Score=18.77 Aligned_cols=57 Identities=23% Similarity=0.430 Sum_probs=31.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCC-----HHHHHH----HHHHHCCCEEEEEEEC
Q ss_conf 3899966877979999999999997898799962678-----089999----9987199258988654
Q gi|254780544|r 44 RVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPIP-----SPAVAM----LTRSLRADVGVMISAS 102 (448)
Q Consensus 44 ~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~p-----tP~l~~----a~~~~~~~gGI~iTaS 102 (448)
+|.||.|.. +-.++..+.+-|...|.+|.|+|.-. -|-..+ .+....++-||.+..|
T Consensus 2 kI~igsDha--G~~lK~~l~~~L~~~g~~V~D~G~~~~~~~DYpd~a~~va~~v~~~~~~~GIliCGt 67 (149)
T 3he8_A 2 KIGIGSDHG--GYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGT 67 (149)
T ss_dssp EEEEEECGG--GHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESS
T ss_pred EEEEEECCC--HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 899995885--699999999999988996897899866677827899999999975897569998687
No 26
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=73.43 E-value=4 Score=18.75 Aligned_cols=56 Identities=23% Similarity=0.326 Sum_probs=31.0
Q ss_pred CCEEEEE---CCCCCHHHHHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 8389996---68779799999999999978987999626-780899999987199258988654
Q gi|254780544|r 43 RRVVIGK---DTRLSGYMLENSLVAGFTAAGMDAFILGP-IPSPAVAMLTRSLRADVGVMISAS 102 (448)
Q Consensus 43 ~~vvVg~---D~R~~s~~~~~~~~~gl~~~G~~V~~~g~-~ptP~l~~a~~~~~~~gGI~iTaS 102 (448)
++|++++ |.+..+ +..++..|...|.+|+++|. +|+..+.-++++.+++ -|.+++|
T Consensus 89 g~vvl~~~~ge~H~lG---~~~va~~l~~~Gw~V~~LG~~vp~e~l~~~~~~~~~~-~v~lS~~ 148 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIG---KNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPD-IVGMSAL 148 (210)
T ss_dssp CEEEEEEBTTCCCCHH---HHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCS-EEEEECC
T ss_pred CEEEEECCCCCHHHHH---HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCC-EEEEEEE
T ss_conf 8489956999777899---9999999998898488567899999999999852999-9999843
No 27
>1vme_A Flavoprotein; TM0755, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: MSE; 1.80A {Thermotoga maritima} SCOP: c.23.5.1 d.157.1.3
Probab=69.22 E-value=5 Score=18.17 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=10.9
Q ss_pred CCCHHHHHHHHHHHHHHH
Q ss_conf 599899999999999998
Q gi|254780544|r 426 GDDLSRIKRIVDDLAKVI 443 (448)
Q Consensus 426 a~~~~~~~~l~~~~~~~i 443 (448)
..+.+.+++..+.+++.+
T Consensus 392 ~~~~~~le~~~~~~~k~l 409 (410)
T 1vme_A 392 NMDERKIEEAISLLKKEL 409 (410)
T ss_dssp TCCTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
T ss_conf 999999999999998762
No 28
>3c5y_A Ribose/galactose isomerase; YP_001165900.1, putative ribose 5-phosphate isomerase, structural genomics; HET: MSE; 1.81A {Novosphingobium aromaticivorans DSM12444}
Probab=64.03 E-value=6.3 Score=17.54 Aligned_cols=21 Identities=19% Similarity=0.075 Sum_probs=10.1
Q ss_pred HHHHHHCCCCCCEEEEECCCC
Q ss_conf 776420023430367531552
Q gi|254780544|r 226 SLQRKVHEVRADIGIALDGDG 246 (448)
Q Consensus 226 ~l~~~v~~~~ad~Gia~DgD~ 246 (448)
..++.|.+..+|+||.+.|-|
T Consensus 74 ~vA~~V~~g~~d~GIliCGTG 94 (231)
T 3c5y_A 74 LAGILLNSGAADFVVTGCGTG 94 (231)
T ss_dssp HHHHHHHHTSCSEEEEEESSS
T ss_pred HHHHHHHCCCCCEEEEECCCH
T ss_conf 999999679977689977854
No 29
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'- deoxyadenosine, radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=60.75 E-value=7.2 Score=17.17 Aligned_cols=54 Identities=15% Similarity=0.112 Sum_probs=30.5
Q ss_pred CCCCEEEEEECCC----CCCCCCCCCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 1896699984466----54333322212333---------222222232223557744221013777642002343036
Q gi|254780544|r 174 LQGLRIVVDCANG----ASYKVAPEVFWELG---------ADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIG 239 (448)
Q Consensus 174 ~~~lkvvvD~~~G----~~~~~~~~il~~lg---------~~~~~i~~~pd~~~~~~~~~~~~~~~l~~~v~~~~ad~G 239 (448)
.++.+|++-|..+ .+...+..+|+..| .+|+-+... ..++.+.+.+.+.++|+.
T Consensus 118 ~r~~~vv~a~~g~D~H~~G~~~v~~~~~~aG~~~~e~~~~feVi~LG~~------------vp~ee~v~~a~e~~aD~V 184 (262)
T 1xrs_B 118 GRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQ------------VANEDFIKKAVELEADVL 184 (262)
T ss_dssp CSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSS------------BCHHHHHHHHHHTTCSEE
T ss_pred CCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC------------CCHHHHHHHHHHCCCCEE
T ss_conf 8886799984086444778999999998758643002684499968889------------999999999986499999
No 30
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein structure initiative, MCSG, structural genomics; HET: MSE; 2.01A {Streptococcus pneumoniae TIGR4}
Probab=59.50 E-value=7.6 Score=17.04 Aligned_cols=69 Identities=14% Similarity=0.065 Sum_probs=27.1
Q ss_pred CCEEEEEECCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 96699984466543------3332221233322222223222355774422-10137776420023430367531552
Q gi|254780544|r 176 GLRIVVDCANGASY------KVAPEVFWELGADVVVIGDKPNGININLDCG-STNVLSLQRKVHEVRADIGIALDGDG 246 (448)
Q Consensus 176 ~lkvvvD~~~G~~~------~~~~~il~~lg~~~~~i~~~pd~~~~~~~~~-~~~~~~l~~~v~~~~ad~Gia~DgD~ 246 (448)
+.||.+-.-|..+. ..+.+.++.+|.+|+-+....+.. .+.+. |..-...++.+.+..+|+||.+.|-|
T Consensus 3 ~MKIal~~d~s~~~~n~~I~e~Lk~~l~~~G~eV~D~G~~s~e~--~~~~dYpd~~~~~A~~v~sg~~d~gIl~CGTG 78 (216)
T 2ppw_A 3 AMKIALINENSQASKNHIIYDSLKEATDKKGYQLFNYGMRGEEG--ESQLTYVQNGLMAAILLNTKAVDFVVTGCGTG 78 (216)
T ss_dssp CCEEEECCCTTTGGGHHHHHHHHHHHHHHHTCEEEECSCCSCTT--CCCCCHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC--CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 71799865650166899999999999986799899657898765--77788079999999999769987799977888
No 31
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=58.05 E-value=8.1 Score=16.89 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=29.8
Q ss_pred CEEEEECCCC-CHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 3899966877-97999999999999789879996267
Q gi|254780544|r 44 RVVIGKDTRL-SGYMLENSLVAGFTAAGMDAFILGPI 79 (448)
Q Consensus 44 ~vvVg~D~R~-~s~~~~~~~~~gl~~~G~~V~~~g~~ 79 (448)
+|+|-|.+.. +.+.++++++.++.+.|++|..+...
T Consensus 2 ~v~IvY~S~tGnTe~~A~~Ia~gl~~~gv~v~~~~~~ 38 (161)
T 3hly_A 2 SVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 8999998998279999999999998679979999726
No 32
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=55.37 E-value=8.9 Score=16.61 Aligned_cols=34 Identities=12% Similarity=0.178 Sum_probs=26.2
Q ss_pred EEEEECCCCCH--HHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 89996687797--99999999999978987999626
Q gi|254780544|r 45 VVIGKDTRLSG--YMLENSLVAGFTAAGMDAFILGP 78 (448)
Q Consensus 45 vvVg~D~R~~s--~~~~~~~~~gl~~~G~~V~~~g~ 78 (448)
++|..-.|..| +.+++.+++.+...|++|..+.+
T Consensus 38 l~i~GS~R~~S~~~~La~~~~~~l~~~g~ev~iidL 73 (247)
T 2q62_A 38 LILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp EEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 999799999888999999999988767987999751
No 33
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=52.05 E-value=10 Score=16.28 Aligned_cols=38 Identities=16% Similarity=-0.019 Sum_probs=31.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 98389996687797999999999999789879996267
Q gi|254780544|r 42 HRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPI 79 (448)
Q Consensus 42 ~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~ 79 (448)
.++|+|=+-.+-++..+++++++|+.+.|.+|..+.+.
T Consensus 4 ~~kvliiy~S~GnT~~la~ai~~Ga~~~G~ev~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYGYGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 98699998183589999999999887649889999766
No 34
>3kgf_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathwa aromatic biosynthesis; HET: PHE TRP; 2.00A {Mycobacterium tuberculosis} PDB: 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 2w19_A 2w1a_A*
Probab=50.37 E-value=11 Score=16.12 Aligned_cols=30 Identities=17% Similarity=0.318 Sum_probs=17.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 889999999999999997237998389996687
Q gi|254780544|r 20 ITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTR 52 (448)
Q Consensus 20 ~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~R 52 (448)
.++.-+.++-..++.+-.+ ..-|+=|-|.=
T Consensus 61 V~a~Ei~~Lk~~La~va~G---~AFlLQgGDCA 90 (464)
T 3kgf_A 61 TVPSEIVRLQEQLAQVAKG---EAFLLQGGDCA 90 (464)
T ss_dssp SCHHHHHHHHHHHHHHHTT---SSEEEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHCC---CEEEEECCCCC
T ss_conf 8899999999999999669---87998773120
No 35
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A*
Probab=49.81 E-value=3.2 Score=19.35 Aligned_cols=26 Identities=23% Similarity=0.358 Sum_probs=16.5
Q ss_pred CCCEEEEECC-CCHHHHHHHHHHHCCC
Q ss_conf 8987999626-7808999999871992
Q gi|254780544|r 69 AGMDAFILGP-IPSPAVAMLTRSLRAD 94 (448)
Q Consensus 69 ~G~~V~~~g~-~ptP~l~~a~~~~~~~ 94 (448)
.|+.|++++. .+-|........+||+
T Consensus 16 ~GvrVldl~~~~agp~~~~~LadlGA~ 42 (408)
T 1xk7_A 16 AGLRVVFSGIEIAGPFAGQMFAEWGAE 42 (408)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHTTCE
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHCCE
T ss_conf 998899817821799999999980995
No 36
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=47.12 E-value=12 Score=15.81 Aligned_cols=21 Identities=14% Similarity=0.094 Sum_probs=9.4
Q ss_pred HHHHHHCCCCCCEEEEECCCC
Q ss_conf 776420023430367531552
Q gi|254780544|r 226 SLQRKVHEVRADIGIALDGDG 246 (448)
Q Consensus 226 ~l~~~v~~~~ad~Gia~DgD~ 246 (448)
...+.+.+..+|+||.+.|-|
T Consensus 57 ~va~~v~~g~~d~gIl~CGTG 77 (214)
T 3ono_A 57 MASILLNSKAVDFVVTGCGTG 77 (214)
T ss_dssp HHHHHHHTTSCSEEEEEESSS
T ss_pred HHHHHHHCCCCCEEEEECCCH
T ss_conf 999999679987699967846
No 37
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=37.34 E-value=17 Score=14.87 Aligned_cols=29 Identities=14% Similarity=-0.054 Sum_probs=11.7
Q ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf 227999961599899999999999998752
Q gi|254780544|r 417 ESLIRIMAEGDDLSRIKRIVDDLAKVIPMI 446 (448)
Q Consensus 417 Ep~iriy~Ea~~~~~~~~l~~~~~~~i~~i 446 (448)
||.+++.- .++++.+++..+--+++.+++
T Consensus 368 ~~~~~~~~-~P~~~~l~~~~~~g~~la~~~ 396 (398)
T 1ycg_A 368 EPGPTVQW-VPRGEDLQRCYELGRKIAARI 396 (398)
T ss_dssp SSCCEEES-SCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHHHHHHH
T ss_conf 77189945-799899999999999999985
No 38
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2a str} SCOP: c.23.5.4
Probab=36.06 E-value=18 Score=14.74 Aligned_cols=34 Identities=12% Similarity=0.141 Sum_probs=22.0
Q ss_pred EEEEECCCCC--HHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 8999668779--799999999999978987999626
Q gi|254780544|r 45 VVIGKDTRLS--GYMLENSLVAGFTAAGMDAFILGP 78 (448)
Q Consensus 45 vvVg~D~R~~--s~~~~~~~~~gl~~~G~~V~~~g~ 78 (448)
++|..-.|.. ++.+++.+++.+...|++|-.+.+
T Consensus 62 L~i~GS~R~~S~~~~la~~aa~~l~~~GaeveiiDL 97 (279)
T 2fzv_A 62 LLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDP 97 (279)
T ss_dssp EEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 999798998785799999999999876986999776
No 39
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes}
Probab=34.68 E-value=9.6 Score=16.42 Aligned_cols=65 Identities=17% Similarity=0.288 Sum_probs=26.8
Q ss_pred HHHHHHHHHCCCCCCE--EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 1377764200234303--67531552100013322375533113567777655320022343332211360044432
Q gi|254780544|r 223 NVLSLQRKVHEVRADI--GIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFI 297 (448)
Q Consensus 223 ~~~~l~~~v~~~~ad~--Gia~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a 297 (448)
....+++.+++.+.++ +-+||+ |-..-.-+|- |.+-+.++.+ +.++. |-.+++++-.+.-++.++
T Consensus 157 ~~~~~A~~lk~~~~~~~r~~~fk~---RTs~~sf~G~---G~egL~il~~-i~~~~---Glpv~Tev~d~~~~~~v~ 223 (385)
T 3nvt_A 157 QVAAVAESIKAKGLKLIRGGAFKP---RTSPYDFQGL---GLEGLKILKR-VSDEY---GLGVISEIVTPADIEVAL 223 (385)
T ss_dssp HHHHHHHHHHHTTCCEEECBSSCC---CSSTTSCCCC---THHHHHHHHH-HHHHH---TCEEEEECCSGGGHHHHT
T ss_pred HHHHHHHHHHHCCCCEEECCEECC---CCCCCCCCCC---CHHHHHHHHH-HHHHC---CCCEEEEEHHHHHHHHHH
T ss_conf 999999999866971897441468---9998675786---5899999999-99864---997466311013179998
No 40
>2npt_A Dual specificity mitogen-activated protein kinase kinase 5; MAP2K5, MEK5, MKK5, PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain, MAP3K2; 1.75A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_A 1wi0_A
Probab=32.52 E-value=14 Score=15.48 Aligned_cols=27 Identities=22% Similarity=0.479 Sum_probs=20.5
Q ss_pred ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3155210001332237553311356777765532
Q gi|254780544|r 242 LDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSH 275 (448)
Q Consensus 242 ~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~ 275 (448)
=|-||||+.+- +.+++-|++..|+..-
T Consensus 61 EDEdGDRITVR-------SDEEl~AMisyy~~~~ 87 (106)
T 2npt_A 61 EDEDGDRITVR-------SDEEMKAMLSYYYSTV 87 (106)
T ss_dssp ECTTSCEEEEC-------SHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEC-------CHHHHHHHHHHHHHHH
T ss_conf 04658876872-------6799999999999999
No 41
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus HB8} PDB: 2eq7_A*
Probab=31.41 E-value=13 Score=15.52 Aligned_cols=85 Identities=19% Similarity=0.216 Sum_probs=42.2
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE-----EEEECCCCCCCC
Q ss_conf 966999844665433332221233322222223222355774422101377764200234303-----675315521000
Q gi|254780544|r 176 GLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADI-----GIALDGDGDRVI 250 (448)
Q Consensus 176 ~lkvvvD~~~G~~~~~~~~il~~lg~~~~~i~~~pd~~~~~~~~~~~~~~~l~~~v~~~~ad~-----Gia~DgD~DR~~ 250 (448)
+-+++| ...|..+.-+...|.++|.+|+.+...+... +..+| +-...+++...+.+..+ -..+.+|.+...
T Consensus 167 pk~vvV-IGgG~ig~E~A~~l~~~G~~Vtli~~~~~lL-~~~d~--e~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~ 242 (455)
T 2yqu_A 167 PKRLIV-VGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-PTMDL--EVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGAR 242 (455)
T ss_dssp CSEEEE-ECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTSCH--HHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEE
T ss_pred CCEEEE-ECCCHHHHHHHHHHHHCCCEEEEEEECCCCC-CCCCH--HHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEE
T ss_conf 997999-9988999999999998699099996088654-20498--9999999999976988945978999998199799
Q ss_pred CCCCCCCCCCCCHH
Q ss_conf 13322375533113
Q gi|254780544|r 251 IVDEKGAIVNGDQI 264 (448)
Q Consensus 251 ivd~~G~~i~~d~~ 264 (448)
+..++|+.+..|.+
T Consensus 243 v~~~~g~~~~~D~v 256 (455)
T 2yqu_A 243 VELEGGEVLEADRV 256 (455)
T ss_dssp EEETTSCEEEESEE
T ss_pred EEECCCEEEECCEE
T ss_conf 99859949993999
No 42
>3ne8_A N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.24A {Bartonella henselae}
Probab=30.82 E-value=19 Score=14.64 Aligned_cols=12 Identities=33% Similarity=0.697 Sum_probs=7.5
Q ss_pred CCCEEEEEECCC
Q ss_conf 896699984466
Q gi|254780544|r 175 QGLRIVVDCANG 186 (448)
Q Consensus 175 ~~lkvvvD~~~G 186 (448)
+.++||+|++||
T Consensus 3 ~~~~IvIDpGHG 14 (234)
T 3ne8_A 3 ASFRVVLDPGHG 14 (234)
T ss_dssp CCEEEEEEECCB
T ss_pred CCEEEEECCCCC
T ss_conf 972999869999
No 43
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus P2} SCOP: d.58.51.1 PDB: 2qmu_B*
Probab=29.89 E-value=23 Score=14.12 Aligned_cols=56 Identities=11% Similarity=0.163 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHH----CCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 58999998765543----0788659996779822799996159989999999999999875
Q gi|254780544|r 389 SSSIVQAIADAESE----LRGIDRLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVIPM 445 (448)
Q Consensus 389 ~~~i~~~~~~~~~~----~~~~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~i~~ 445 (448)
.+.+.+.+...... .....-+-|+--| -|..||-+.+.|.+.++++++++.+.+..
T Consensus 20 Ie~IK~aL~~a~~~~~~~~~~~~~i~i~~ig-aP~Yri~v~a~D~k~ae~~l~~a~~~i~~ 79 (93)
T 2qn6_B 20 VEKIKEVISKALENIEQDYESLLNIKIYTIG-APRYRVDVVGTNPKEASEALNQIISNLIK 79 (93)
T ss_dssp HHHHHHHHHHHHTTHHHHCTTEEEEEEEESS-TTEEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC-CCEEEEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 9999999999986221236777439999966-98189999937999999999999999999
No 44
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=29.86 E-value=17 Score=14.88 Aligned_cols=108 Identities=16% Similarity=0.200 Sum_probs=52.6
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC
Q ss_conf 18966999844665433332221233322222223222355--7744221013777642002343036753155210001
Q gi|254780544|r 174 LQGLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGIN--INLDCGSTNVLSLQRKVHEVRADIGIALDGDGDRVII 251 (448)
Q Consensus 174 ~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~~i~~~pd~~~--~~~~~~~~~~~~l~~~v~~~~ad~Gia~DgD~DR~~i 251 (448)
+.+-+++| ...|..+..+.+.+..+|++++.++..+...- .......-....+.+.+. ++|+.+..-|
T Consensus 153 l~g~~v~i-~G~G~~g~~~~~~~~~~g~~v~v~~r~~~~~~~~~~~g~~~~~~~~l~~~~~--~aDvvi~~~p------- 222 (293)
T 3d4o_A 153 IHGANVAV-LGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELR--DVDVCINTIP------- 222 (293)
T ss_dssp STTCEEEE-ECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTT--TCSEEEECCS-------
T ss_pred CCCCEEEE-ECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCEEEECCHHHHHHC--CCCEEEECCC-------
T ss_conf 47878999-8888899999999997699799995773008999851883485330677757--6999998999-------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-HH-HHHHHCCCCCCCC
Q ss_conf 3322375533113567777655320022343332211360-04-4432001211111
Q gi|254780544|r 252 VDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNI-GL-ERFIAGLGLSLKR 306 (448)
Q Consensus 252 vd~~G~~i~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~-~i-~~~a~~~g~~v~~ 306 (448)
..+++.+. ++.- +...++.++.+.. .+ .+.++++|.+.+.
T Consensus 223 ----~~~i~~~~---------l~~~--~~gaviiDva~~~gg~d~~~~~~~g~~~~~ 264 (293)
T 3d4o_A 223 ----ALVVTANV---------LAEM--PSHTFVIDLASKPGGTDFRYAEKRGIKALL 264 (293)
T ss_dssp ----SCCBCHHH---------HHHS--CTTCEEEECSSTTCSBCHHHHHHHTCEEEE
T ss_pred ----CCCCCHHH---------HHHC--CCCCEEEEECCCCCCCCHHHHHHHCCEEEE
T ss_conf ----87588999---------9728--999799994899898788999971966999
No 45
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=29.17 E-value=23 Score=14.04 Aligned_cols=87 Identities=18% Similarity=0.158 Sum_probs=53.0
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC---CCCCHHHHHHHHHHHHHHCCCEEEE-ECCCCHHHHHHHHH
Q ss_conf 5068778899999999999999972379983899966---8779799999999999978987999-62678089999998
Q gi|254780544|r 14 KSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKD---TRLSGYMLENSLVAGFTAAGMDAFI-LGPIPSPAVAMLTR 89 (448)
Q Consensus 14 ~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D---~R~~s~~~~~~~~~gl~~~G~~V~~-~g~~ptP~l~~a~~ 89 (448)
-+|. .+.+.+..+-.|-- ..+++|++..- .++.+..+...+.......++.|.. +.-+.+-..-...-
T Consensus 21 Afnv--~~~e~~~avi~AAe------e~~sPvIlq~s~~~~~~~~~~~~~~~~~~a~~~~VpvalHlDH~~~~e~i~~ai 92 (305)
T 1rvg_A 21 AFNV--NNMEFLQAVLEAAE------EQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSYESVLRAL 92 (305)
T ss_dssp EEEC--CSHHHHHHHHHHHH------HTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEECSHHHHHHHH
T ss_pred EEEE--CCHHHHHHHHHHHH------HHCCCEEEECCCCHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
T ss_conf 8767--98999999999999------969999999874577664389999999987665999899745557988899998
Q ss_pred HHCCCEEEEEEECCCCCCCE
Q ss_conf 71992589886547775201
Q gi|254780544|r 90 SLRADVGVMISASHNPYQDN 109 (448)
Q Consensus 90 ~~~~~gGI~iTaSHNP~~~n 109 (448)
+.+++ .||+-+||-|.+.|
T Consensus 93 ~~Gft-SVMiDgS~l~~eeN 111 (305)
T 1rvg_A 93 RAGFT-SVMIDKSHEDFETN 111 (305)
T ss_dssp HTTCS-EEEECCTTSCHHHH
T ss_pred HCCCC-EEEECCCCCCHHHH
T ss_conf 74998-79864998888999
No 46
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A
Probab=28.55 E-value=24 Score=13.97 Aligned_cols=31 Identities=10% Similarity=-0.004 Sum_probs=17.8
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEECCCCH
Q ss_conf 8779799999999999978987999626780
Q gi|254780544|r 51 TRLSGYMLENSLVAGFTAAGMDAFILGPIPS 81 (448)
Q Consensus 51 ~R~~s~~~~~~~~~gl~~~G~~V~~~g~~pt 81 (448)
.++.+..-+..-+.-+.+.|.+++|+|-.+|
T Consensus 32 g~~~~~~~a~~~a~~mi~~GAdiIDIGgeST 62 (282)
T 1aj0_A 32 GTHNSLIDAVKHANLMINAGATIIDVGGEST 62 (282)
T ss_dssp CCCTHHHHHHHHHHHHHHHTCSEEEEESSCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCEEC
T ss_conf 7578999999999999987996998797347
No 47
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=28.52 E-value=21 Score=14.26 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=18.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 389996687797999999999999789879996267
Q gi|254780544|r 44 RVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPI 79 (448)
Q Consensus 44 ~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~ 79 (448)
+|+|=-=+-+ +-..++.-|+..|.+|+.+.--
T Consensus 14 KILVtGatGf----IG~~l~~~Ll~~g~~V~~~~r~ 45 (321)
T 2pk3_A 14 RALITGVAGF----VGKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp EEEEETTTSH----HHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCH----HHHHHHHHHHHCCCEEEEEECC
T ss_conf 7999678888----9999999999884989998088
No 48
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=28.07 E-value=24 Score=13.92 Aligned_cols=81 Identities=14% Similarity=0.117 Sum_probs=53.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCC----CCCEEEEECCCC------------CHHHHHHHHHHHHHHCCCEEE--EE-C--
Q ss_conf 78899999999999999972379----983899966877------------979999999999997898799--96-2--
Q gi|254780544|r 19 PITPNFMMRIGIAVGYLFRGKKK----HRRVVIGKDTRL------------SGYMLENSLVAGFTAAGMDAF--IL-G-- 77 (448)
Q Consensus 19 ~~t~~~v~~i~~a~~~~~~~~~~----~~~vvVg~D~R~------------~s~~~~~~~~~gl~~~G~~V~--~~-g-- 77 (448)
.++|+++.++|.++|.-++..+. .+.+=|.||.|- ..-.++.+.+.|+++.|+-.. .+ |
T Consensus 73 t~d~~l~~~~g~~~~~E~ra~G~~~~laP~~di~r~p~~gR~~e~fgeDP~l~~~~~~a~v~G~q~~gv~a~~KHf~g~~ 152 (845)
T 3abz_A 73 TFDRDLLETAGKLMAKESIAKNAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGEGIAATVKHFVCND 152 (845)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHTTCBCEEEEETTCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
T ss_conf 48999999999999999998299999646146767998774740637799999999999999861099189816601789
Q ss_pred ------------------CCCHHHHHHHHHHHCCCEEEEEE
Q ss_conf ------------------67808999999871992589886
Q gi|254780544|r 78 ------------------PIPSPAVAMLTRSLRADVGVMIS 100 (448)
Q Consensus 78 ------------------~~ptP~l~~a~~~~~~~gGI~iT 100 (448)
..=.|-...+++.-++ .+||..
T Consensus 153 ~~~~r~~~~~~~~~~~l~e~~l~pF~~ai~~~~~-~~vM~a 192 (845)
T 3abz_A 153 LEDQRFSSNSIVSERALREIYLEPFRLAVKHANP-VCIMTA 192 (845)
T ss_dssp CCTTTTTCEEECCHHHHHHTTSHHHHHHHHHHCC-SEEEEC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC-CEEEEC
T ss_conf 8877876788589899999875658887642786-579952
No 49
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata}
Probab=26.59 E-value=26 Score=13.76 Aligned_cols=44 Identities=14% Similarity=0.105 Sum_probs=35.7
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
Q ss_conf 83899966877979999999999997898799962678089999
Q gi|254780544|r 43 RRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPIPSPAVAM 86 (448)
Q Consensus 43 ~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~ptP~l~~ 86 (448)
++|+|+-|....|+...+..+.-....|.++..+...+.|....
T Consensus 3 ~~ILv~vD~S~~s~~al~~A~~la~~~~~~l~lv~v~~~~~~~~ 46 (147)
T 3hgm_A 3 NRIMVPVDGSKGAVKALEKGVGLQQLTGAELYILCVFKHHSLLE 46 (147)
T ss_dssp SEEEEECCSBHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCC
T ss_conf 84999978999999999999999987299899999863776554
No 50
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, cytoplasm, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} PDB: 3ifs_A*
Probab=25.91 E-value=24 Score=14.02 Aligned_cols=18 Identities=6% Similarity=0.016 Sum_probs=9.9
Q ss_pred HHHHHHHHCCCEEEEECC
Q ss_conf 999999978987999626
Q gi|254780544|r 61 SLVAGFTAAGMDAFILGP 78 (448)
Q Consensus 61 ~~~~gl~~~G~~V~~~g~ 78 (448)
.++.-+.+..-.|+.+|.
T Consensus 67 ~~a~~i~~~~~~iV~IGI 84 (446)
T 3ff1_A 67 EASKRIKENSDVLVVIGI 84 (446)
T ss_dssp HHHHHHHHHCSEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEC
T ss_conf 999999827988999935
No 51
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=24.43 E-value=28 Score=13.51 Aligned_cols=40 Identities=10% Similarity=0.079 Sum_probs=31.9
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHH
Q ss_conf 8389996687797999999999999789879996267808
Q gi|254780544|r 43 RRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPIPSP 82 (448)
Q Consensus 43 ~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~ptP 82 (448)
++|+|+.|....|+...+.++.-....+.++..+...++|
T Consensus 3 k~ILv~~D~s~~s~~al~~a~~la~~~~~~i~llhV~~~~ 42 (137)
T 2z08_A 3 KTILLAYDGSEHARRAAEVAKAEAEAHGARLIVVHAYEPV 42 (137)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEEECC-
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCC
T ss_conf 8099998899899999999999999839989999984256
No 52
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidoreductase; HET: FMN; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2ohi_A* 2ohj_A*
Probab=22.88 E-value=30 Score=13.32 Aligned_cols=16 Identities=25% Similarity=0.368 Sum_probs=8.0
Q ss_pred CCCCCCCCCCC-CHHHH
Q ss_conf 13322375533-11356
Q gi|254780544|r 251 IVDEKGAIVNG-DQIMA 266 (448)
Q Consensus 251 ivd~~G~~i~~-d~~~~ 266 (448)
++-..|.+++. .+++-
T Consensus 229 I~PgHGpv~~~~~~~i~ 245 (404)
T 2ohh_A 229 IAPSHGQIWTDPMKIIE 245 (404)
T ss_dssp EECSSSCBBSSHHHHHH
T ss_pred EECCCCHHHCCHHHHHH
T ss_conf 96277027569899999
No 53
>3hzp_A NTF2-like protein of unknown function; YP_291699.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE 1PE; 1.40A {Prochlorococcus marinus str}
Probab=22.86 E-value=28 Score=13.57 Aligned_cols=24 Identities=4% Similarity=-0.033 Sum_probs=11.9
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 322235577442210137776420
Q gi|254780544|r 208 DKPNGININLDCGSTNVLSLQRKV 231 (448)
Q Consensus 208 ~~pd~~~~~~~~~~~~~~~l~~~v 231 (448)
..+|+.|++|.-+|-+.+...+.+
T Consensus 29 ~t~dflfIRPSGNPl~a~g~~~Mm 52 (131)
T 3hzp_A 29 ATADFLFIRPSGNPLDAKGFENMW 52 (131)
T ss_dssp BCTTCCEECTTSCEECHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCHHHHHHHH
T ss_conf 898879986899975878999861
No 54
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=22.07 E-value=32 Score=13.22 Aligned_cols=21 Identities=29% Similarity=0.468 Sum_probs=10.7
Q ss_pred CCCCCCCCCCC-CHHHHHHHHH
Q ss_conf 13322375533-1135677776
Q gi|254780544|r 251 IVDEKGAIVNG-DQIMALIARE 271 (448)
Q Consensus 251 ivd~~G~~i~~-d~~~~lla~~ 271 (448)
++-..|-++.+ +++...+-.|
T Consensus 222 I~PgHGpv~~~~~~i~~~~~~y 243 (402)
T 1e5d_A 222 ICPDHGVIFRGADQCTFAVQKY 243 (402)
T ss_dssp EEESSSCBEESHHHHHHHHHHH
T ss_pred EEECCCCEECCHHHHHHHHHHH
T ss_conf 9636843015837799999999
No 55
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=21.90 E-value=32 Score=13.20 Aligned_cols=12 Identities=17% Similarity=0.224 Sum_probs=4.6
Q ss_pred CCCCCCCCCCCC
Q ss_conf 654333322212
Q gi|254780544|r 186 GASYKVAPEVFW 197 (448)
Q Consensus 186 G~~~~~~~~il~ 197 (448)
|-+..+++++++
T Consensus 238 GNaadv~e~l~~ 249 (552)
T 2fkn_A 238 GNAAEVHHTLLN 249 (552)
T ss_dssp SCHHHHHHHHHT
T ss_pred CCHHHHHHHHHH
T ss_conf 559999999996
No 56
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structure initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A*
Probab=20.65 E-value=14 Score=15.50 Aligned_cols=26 Identities=15% Similarity=0.257 Sum_probs=20.3
Q ss_pred CCCEEEEECC-CCHHHHHHHHHHHCCC
Q ss_conf 8987999626-7808999999871992
Q gi|254780544|r 69 AGMDAFILGP-IPSPAVAMLTRSLRAD 94 (448)
Q Consensus 69 ~G~~V~~~g~-~ptP~l~~a~~~~~~~ 94 (448)
.|+.|++++. .+-|........++|+
T Consensus 8 ~GirVldl~~~~agp~a~~~Lad~GAe 34 (428)
T 1q7e_A 8 QGIKVLDFTGVQSGPSCTQMLAWFGAD 34 (428)
T ss_dssp TTCEEEECCCTTHHHHHHHHHHHTTCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHCCE
T ss_conf 999888838748999999999980991
No 57
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=20.55 E-value=34 Score=13.03 Aligned_cols=42 Identities=19% Similarity=0.358 Sum_probs=23.9
Q ss_pred HHHCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7632631021189669998446654333322212333222222
Q gi|254780544|r 164 VKRTLPRDVTLQGLRIVVDCANGASYKVAPEVFWELGADVVVI 206 (448)
Q Consensus 164 l~~~~~~~~~~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~~i 206 (448)
+.+.+.......+.+.|+|.+.|.+. +...++.+.+.+++.+
T Consensus 67 l~~~l~~~~~~~~~~~vLDiGcG~G~-~~~~ll~~~~~~v~~v 108 (241)
T 2ex4_A 67 LQRFLREGPNKTGTSCALDCGAGIGR-ITKRLLLPLFREVDMV 108 (241)
T ss_dssp HHGGGC----CCCCSEEEEETCTTTH-HHHHTTTTTCSEEEEE
T ss_pred HHHHHHHCCCCCCCCEEEEECCCCCH-HHHHHHHCCCCEEEEE
T ss_conf 99999865577788769990157078-6999997059989999
No 58
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=20.08 E-value=35 Score=12.97 Aligned_cols=69 Identities=13% Similarity=0.164 Sum_probs=30.0
Q ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHH-HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCEEEEEEC
Q ss_conf 520125640365456783578999999-6156643344543322211135425666887763263102118966999844
Q gi|254780544|r 106 YQDNGIKLFGPDGYKVSTDIEDRIETL-LEDDLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRIVVDCA 184 (448)
Q Consensus 106 ~~~nGiK~~~~~G~~i~~~~~~~Ie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Yi~~l~~~~~~~~~~~~lkvvvD~~ 184 (448)
.|.+|.+|++.+|... +..+.|... ++..+.+. +. ...++ ....+++.+.+. -++..+++|.+|.+
T Consensus 15 ~e~~g~~~~~~~g~~~--d~~~~lk~~G~N~VRi~v---W~-----~P~~g--~~~~~~~~~~~~-~a~~~Gm~v~ldlH 81 (334)
T 1fob_A 15 LEDEGYSYKNLNGQTQ--ALETILADAGINSIRQRV---WV-----NPSDG--SYDLDYNLELAK-RVKAAGMSLYLDLH 81 (334)
T ss_dssp HHHTTCCCBCTTSCBC--CHHHHHHHHTCCEEEEEE---CS-----CCTTC--TTCHHHHHHHHH-HHHHTTCEEEEEEC
T ss_pred HHHCCCEEECCCCCCC--CHHHHHHHCCCCEEEEEE---EE-----CCCCC--CCCHHHHHHHHH-HHHHCCCEEEEECC
T ss_conf 9977988899999734--599999984999799854---12-----79888--679999999999-99988998999647
Q ss_pred CCC
Q ss_conf 665
Q gi|254780544|r 185 NGA 187 (448)
Q Consensus 185 ~G~ 187 (448)
+..
T Consensus 82 ~sd 84 (334)
T 1fob_A 82 LSD 84 (334)
T ss_dssp CSS
T ss_pred CCC
T ss_conf 788
No 59
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus HB8} SCOP: c.66.1.46
Probab=20.07 E-value=35 Score=12.96 Aligned_cols=53 Identities=15% Similarity=-0.073 Sum_probs=34.8
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHH---CCCEEEEECCCCHHHHHHHHHHHCC
Q ss_conf 79983899966877979999999999997---8987999626780899999987199
Q gi|254780544|r 40 KKHRRVVIGKDTRLSGYMLENSLVAGFTA---AGMDAFILGPIPSPAVAMLTRSLRA 93 (448)
Q Consensus 40 ~~~~~vvVg~D~R~~s~~~~~~~~~gl~~---~G~~V~~~g~~ptP~l~~a~~~~~~ 93 (448)
.+++++.+.-++|+++....+++-..|.+ .|..|+|++.- +..++......++
T Consensus 9 ~kg~~~~~~~~~Rpt~~~vre~~f~~l~~~~~~~~~vLDl~~G-~G~~~i~a~~~ga 64 (171)
T 1ws6_A 9 ARGVALKVPASARPSPVRLRKALFDYLRLRYPRRGRFLDPFAG-SGAVGLEAASEGW 64 (171)
T ss_dssp GTTCEECCCTTCCCCCHHHHHHHHHHHHHHCTTCCEEEEETCS-SCHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCC-HHHHHHHHHHCCC
T ss_conf 3698838998989674899999999973645797989996206-7899999998089
Done!