Query         gi|254780544|ref|YP_003064957.1| phosphoglucosamine mutase protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 448
No_of_seqs    148 out of 5530
Neff          8.2 
Searched_HMMs 13730
Date          Wed Jun  1 09:51:56 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780544.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1p5dx1 c.84.1.1 (X:9-154) Pho 100.0 9.4E-40 6.9E-44  262.0  17.6  135    1-138     1-135 (146)
  2 d3pmga1 c.84.1.1 (A:1-190) Pho 100.0 8.8E-38 6.4E-42  249.8  12.6  131    6-136    16-153 (190)
  3 d1kfia1 c.84.1.1 (A:3-205) Exo 100.0 1.1E-35 7.9E-40  236.9  12.8  129    6-135    19-161 (203)
  4 d1p5dx3 c.84.1.1 (X:259-367) P  99.9 3.5E-24 2.5E-28  165.9   4.2  108  260-369     1-109 (109)
  5 d1p5dx2 c.84.1.1 (X:155-258) P  99.9 2.7E-23   2E-27  160.4   5.4  100  157-259     2-104 (104)
  6 d3pmga2 c.84.1.1 (A:191-303) P  99.9 4.8E-23 3.5E-27  158.8   5.9  102  158-259     2-113 (113)
  7 d3pmga3 c.84.1.1 (A:304-420) P  99.8   2E-21 1.5E-25  148.8   4.3   90  281-371    25-114 (117)
  8 d1kfia3 c.84.1.1 (A:324-443) E  99.8 3.1E-21 2.3E-25  147.6   2.2  103  260-364     2-104 (120)
  9 d1kfia2 c.84.1.1 (A:206-323) E  99.8 4.1E-20   3E-24  140.7   3.4  101  158-259     2-118 (118)
 10 d1wjwa_ d.129.2.1 (A:) Phospho  99.4 1.5E-13 1.1E-17  100.2   7.7   79  368-447     9-97  (112)
 11 d1p5dx4 d.129.2.1 (X:368-463)   99.3 5.4E-12   4E-16   90.6   7.6   68  378-448    10-90  (96)
 12 d7reqa2 c.23.6.1 (A:561-728) M  95.1   0.089 6.5E-06   27.5   8.7   87   10-101     5-96  (168)
 13 d3bula2 c.23.6.1 (A:741-896) M  93.8    0.15 1.1E-05   26.1   7.5   58   41-102     5-66  (156)
 14 d1ccwa_ c.23.6.1 (A:) Glutamat  92.3     0.3 2.2E-05   24.3   8.1   58   42-103     3-64  (137)
 15 d1nn4a_ c.121.1.1 (A:) Alterna  92.2     0.3 2.2E-05   24.2   7.8   58   43-102    15-81  (159)
 16 d2vvpa1 c.121.1.1 (A:3-158) Al  90.4    0.45 3.3E-05   23.1   7.0   57   44-102     3-69  (156)
 17 d1kfia4 d.129.2.1 (A:444-572)   88.2    0.27 1.9E-05   24.6   4.0   25  402-426    62-89  (129)
 18 d3pmga4 d.129.2.1 (A:421-561)   88.1    0.22 1.6E-05   25.0   3.6   25  402-426    72-99  (141)
 19 d1xrsb1 c.23.6.1 (B:102-261) D  80.6     1.2 8.6E-05   20.6   4.5   58   40-101    17-87  (160)
 20 d1o1xa_ c.121.1.1 (A:) Putativ  77.5     1.8 0.00013   19.4   8.4   57   44-102     4-69  (145)
 21 d1e5da1 c.23.5.1 (A:251-402) R  55.6     5.1 0.00037   16.6   8.9   38   42-79      2-40  (152)
 22 d1xk7a1 c.123.1.1 (A:4-405) Cr  46.9     2.2 0.00016   18.9   0.3   26   69-94     10-36  (402)
 23 d1ad1a_ c.1.21.1 (A:) Dihydrop  45.2     7.5 0.00054   15.6   6.9   24   55-78     24-47  (264)
 24 d2b7oa1 c.1.10.8 (A:1-462) Pro  42.1     8.3 0.00061   15.3   4.1   30   20-52     59-88  (462)
 25 d1knxa1 c.98.2.1 (A:1-132) HPr  41.8     6.5 0.00047   16.0   2.1   74  242-318    46-124 (132)
 26 d2fzva1 c.23.5.4 (A:1-233) Put  37.6     9.8 0.00071   14.9   6.9   36   44-79     37-74  (233)
 27 d1ycga1 c.23.5.1 (A:251-399) N  36.6      10 0.00074   14.8   7.8   38   42-79      2-40  (149)
 28 d2a5la1 c.23.5.8 (A:3-198) Trp  34.8      11 0.00079   14.6   6.2   40   42-81      1-41  (196)
 29 d1rvga_ c.1.10.2 (A:) Fructose  33.3      11 0.00084   14.5   7.8   87   13-109    20-111 (305)
 30 d2npta1 d.15.2.2 (A:4-108) Mit  32.7     7.8 0.00057   15.5   1.3   27  242-275    60-86  (105)
 31 d2qn6b1 d.58.51.1 (B:176-264)   32.1      12 0.00088   14.3   4.6   56  389-445    18-77  (89)
 32 d1foba_ c.1.8.3 (A:) Beta-1,4-  30.0      13 0.00095   14.1   2.7   16  106-121    15-30  (334)
 33 d1v59a2 c.3.1.5 (A:161-282) Di  27.1      10 0.00074   14.8   1.1   58  177-238    24-81  (122)
 34 d1vmea1 c.23.5.1 (A:251-398) R  26.7      15  0.0011   13.8   7.7   60   41-101     2-65  (148)
 35 d1j3wa_ d.110.7.1 (A:) Giding   23.4      15  0.0011   13.8   1.4   45  228-272    16-62  (134)
 36 d1x74a1 c.123.1.1 (A:2-360) 2-  22.0     7.8 0.00057   15.5  -0.3   26   69-94      5-31  (359)
 37 d1lvla2 c.3.1.5 (A:151-265) Di  21.3      19  0.0014   13.1   1.9   56  176-235    21-76  (115)
 38 d2vjma1 c.123.1.1 (A:2-428) Fo  20.1     8.2 0.00059   15.4  -0.5   26   69-94      5-31  (427)

No 1  
>d1p5dx1 c.84.1.1 (X:9-154) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=100.00  E-value=9.4e-40  Score=262.00  Aligned_cols=135  Identities=27%  Similarity=0.419  Sum_probs=122.7

Q ss_pred             CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf             96520335860155068778899999999999999972379983899966877979999999999997898799962678
Q gi|254780544|r    1 MKRRFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPIP   80 (448)
Q Consensus         1 m~r~lFGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~p   80 (448)
                      |.+++||++||||++|+ +|||+++.++|+|+++++..+ ..++|+||||+|.+|++|++++++||+++|++|+++|.+|
T Consensus         1 ~~~sif~~~dIRGi~~~-~lt~~~~~~ig~a~~~~~~~~-~~~~VvIg~D~R~ss~~~~~~~~~gl~~~G~~V~~~g~~p   78 (146)
T d1p5dx1           1 LPASIFRAYDIRGVVGD-TLTAETAYWIGRAIGSESLAR-GEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVP   78 (146)
T ss_dssp             CCGGGBCSSSEEEEBTT-TBCHHHHHHHHHHHHHHHHHT-TCCEEEEEECSCTTHHHHHHHHHHHHHTBTCEEEEEEECC
T ss_pred             CCHHHCCCCCEEEECCC-CCCHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCHHHHHHHHHEEECCCCEEEEECCCCC
T ss_conf             97556653577025799-969999999999999998755-9988999977864401666532206505764887454456


Q ss_pred             HHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             0899999987199258988654777520125640365456783578999999615664
Q gi|254780544|r   81 SPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLT  138 (448)
Q Consensus        81 tP~l~~a~~~~~~~gGI~iTaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~  138 (448)
                      ||+++|+++++++++||||||||||++|||+||+.+ |..+.+++.++|++.+++..+
T Consensus        79 TP~l~~~~~~~~~~~GI~ITASHNP~~~NGiK~~~~-g~~~~~~~~~~i~~~~~~~~~  135 (146)
T d1p5dx1          79 TPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVA-GETLANEQIQALRERIEKNDL  135 (146)
T ss_dssp             HHHHHHHHHHSSCSEEEEECCTTSCTTEEEEEEEET-TEECCTHHHHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECC-CCCCCHHHHHHHHHHHHCCCC
T ss_conf             088999998624673368862478601040898669-996494999999999854774


No 2  
>d3pmga1 c.84.1.1 (A:1-190) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=8.8e-38  Score=249.82  Aligned_cols=131  Identities=25%  Similarity=0.350  Sum_probs=120.5

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC-CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEE---ECCCCH
Q ss_conf             3358601550687788999999999999999723-799838999668779799999999999978987999---626780
Q gi|254780544|r    6 FGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGK-KKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFI---LGPIPS   81 (448)
Q Consensus         6 FGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~-~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~---~g~~pt   81 (448)
                      |||+||||.++.+.+|++++.++++|++.+++.. ..+++|+||||+|++|++|+.+++++|.++|++|+.   +|.+||
T Consensus        16 fGTdGiRG~~g~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vvIG~D~R~ss~~~a~~~a~~l~~~g~~v~~~~~~g~~pT   95 (190)
T d3pmga1          16 PGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILST   95 (190)
T ss_dssp             CBTTBEEEEHHHHHHSTTHHHHHHHHHHHTSCGGGTTTCEEEEEECCCTTHHHHHHHHHHHHHHTTCCEEEEEEEEECCH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
T ss_conf             85746686068888898999999999999998744898569997177708899999999999754630588437876565


Q ss_pred             HHHHHHHHHHCCCEEEEEEECCCCCC---CEEEEEECCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             89999998719925898865477752---01256403654567835789999996156
Q gi|254780544|r   82 PAVAMLTRSLRADVGVMISASHNPYQ---DNGIKLFGPDGYKVSTDIEDRIETLLEDD  136 (448)
Q Consensus        82 P~l~~a~~~~~~~gGI~iTaSHNP~~---~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~  136 (448)
                      |+++|+++++++++||||||||||++   |||+||+.++|.++.++.+++|++.....
T Consensus        96 P~~~~~~~~~~~~~GimITASHNP~ep~~~NG~K~~~~~G~~~~~~~~~~I~~~~~~i  153 (190)
T d3pmga1          96 PAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTI  153 (190)
T ss_dssp             HHHHHHHHHHTCSEEEEECCTTSCCSTTSEEEEEEEETTSSBCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf             5899887753874578973665778757777699989999899779999999999741


No 3  
>d1kfia1 c.84.1.1 (A:3-205) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]}
Probab=100.00  E-value=1.1e-35  Score=236.92  Aligned_cols=129  Identities=25%  Similarity=0.322  Sum_probs=115.0

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC--CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE---CCCC
Q ss_conf             3358601550687788999999999999999723--7998389996687797999999999999789879996---2678
Q gi|254780544|r    6 FGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGK--KKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFIL---GPIP   80 (448)
Q Consensus         6 FGt~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~--~~~~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~---g~~p   80 (448)
                      |||+||||+++++ .++.++.++.++++.++...  ..+++|+||+|+|++|++++.+++++|.++|++|+.+   |.+|
T Consensus        19 ~GTsG~Rg~v~~f-~~~~~~~~~iqai~~~l~~~~~~~~~~vviG~D~R~~s~~~~~~~~~~l~a~Gi~v~~~~~~g~~p   97 (203)
T d1kfia1          19 PGTSGLRKKVSEA-TQPNYLENFVQSIFNTLRKDELKPKNVLFVGGDGRYFNRQAIFSIIRLAYANDISEVHVGQAGLMS   97 (203)
T ss_dssp             CBTTBEEEEHHHH-TSTTHHHHHHHHHHHHSCGGGSSSSCEEEEEECCCTTHHHHHHHHHHHHHHTTCSEEEEEGGGCBC
T ss_pred             CCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf             9778778504434-773139999999999977511468965999527872649999999999975782799934898043


Q ss_pred             HHHHHHHHHHH-----CCCEEEEEEECCCCCCCE----EEEEECCCCCCCCHHHHHHHHHHHHC
Q ss_conf             08999999871-----992589886547775201----25640365456783578999999615
Q gi|254780544|r   81 SPAVAMLTRSL-----RADVGVMISASHNPYQDN----GIKLFGPDGYKVSTDIEDRIETLLED  135 (448)
Q Consensus        81 tP~l~~a~~~~-----~~~gGI~iTaSHNP~~~n----GiK~~~~~G~~i~~~~~~~Ie~~~~~  135 (448)
                      ||+++|+++++     +|.|||||||||||++||    ||||+.++|.++.++.+++|++..+.
T Consensus        98 TP~~~~~i~~~~~~~~~a~~gi~iTaSHNP~~~n~~D~GiK~~~~~G~~~~~~~~~~I~~~~~~  161 (203)
T d1kfia1          98 TPASSHYIRKVNEEVGNCIGGIILTASHNPGGKEHGDFGIKFNVRTGAPAPEDFTDQIYTHTTK  161 (203)
T ss_dssp             HHHHHHHHHHHHHHSCCEEEEEEECCTTSCCSTTTCEEEEEEECTTSSBCCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             6999999999565432442137973356877677667369986788899977999999999853


No 4  
>d1p5dx3 c.84.1.1 (X:259-367) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.88  E-value=3.5e-24  Score=165.86  Aligned_cols=108  Identities=25%  Similarity=0.376  Sum_probs=101.0

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCEEEEECCC
Q ss_conf             33113567777655320022343332211360044432001211111233211011111028970013466236530100
Q gi|254780544|r  260 NGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYG  339 (448)
Q Consensus       260 ~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~~g~E~sg~~~~~~~~  339 (448)
                      .||++++|+++++++++  ++.+||.++.||.+++++++++|++++||+||++||.++|++.++.||||+|||++|+++.
T Consensus         1 ~gD~il~lla~~~l~~~--~~~~VV~~v~~s~~i~~~~~~~g~~~~~t~vG~~~v~~~m~~~~a~~GGE~SGh~~~~~~~   78 (109)
T d1p5dx3           1 YPDRLLMLFAKDVVSRN--PGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERW   78 (109)
T ss_dssp             CHHHHHHHHHHHHHHHS--TTCEEEEETTSCTHHHHHHHHTTCEEEEECSSHHHHHHHHHHHCCSEEECTTSBEEETTTT
T ss_pred             CCHHHHHHHHHHHHHHC--CCCEEEEECHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCEEECCCCEEEECCCC
T ss_conf             90899999999999878--9983998170275599999975995540148769999998555996774366347752677


Q ss_pred             C-CCCCCCCCCHHHHHHHHCCCCHHHHHHHH
Q ss_conf             0-14442332024667775588889999865
Q gi|254780544|r  340 S-TGDGLVAALQVLRYIKQYDKPVSTICHCF  369 (448)
Q Consensus       340 ~-~~Dgi~a~l~~le~l~~~~~~l~~l~~~l  369 (448)
                      + ++||+++++++|++++++++++++|++.|
T Consensus        79 ~~~~Dgi~~al~~le~l~~~~~~lsel~~~f  109 (109)
T d1p5dx3          79 FGFDDGIYSAARLLEILSQDQRDSEHVFSAF  109 (109)
T ss_dssp             CSSBCHHHHHHHHHHHHHTCSSCHHHHHHTS
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHHHHCC
T ss_conf             8988489999999999987199999998609


No 5  
>d1p5dx2 c.84.1.1 (X:155-258) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.87  E-value=2.7e-23  Score=160.38  Aligned_cols=100  Identities=33%  Similarity=0.564  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CHHHHHHHHHCC
Q ss_conf             56668877632631021189669998446654333322212333222222232223557744221---013777642002
Q gi|254780544|r  157 HDRYIEHVKRTLPRDVTLQGLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGS---TNVLSLQRKVHE  233 (448)
Q Consensus       157 ~~~Yi~~l~~~~~~~~~~~~lkvvvD~~~G~~~~~~~~il~~lg~~~~~i~~~pd~~~~~~~~~~---~~~~~l~~~v~~  233 (448)
                      .+.|++++++.++.   .+++||++||+||+++.+++++|+.+||+++.+|++||+.|++..|+|   +++..+.+.+++
T Consensus         2 ~~~Yi~~i~~~i~~---~~~lkvvvD~~nGa~~~~~~~ll~~~~~~~~~~~~~pd~~f~~~~p~p~~~~~l~~~~~~v~~   78 (104)
T d1p5dx2           2 LPRYFKQIRDDIAM---AKPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKA   78 (104)
T ss_dssp             HHHHHHHHHTTCCC---SSCEEEEEECTTSGGGGTHHHHHHHHHEEEEEESCSCCTTCCSSCSCTTSGGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH---CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf             69999999975103---489889997896662788999875508759980543799988868887789999999998634


Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             34303675315521000133223755
Q gi|254780544|r  234 VRADIGIALDGDGDRVIIVDEKGAIV  259 (448)
Q Consensus       234 ~~ad~Gia~DgD~DR~~ivd~~G~~i  259 (448)
                      .++|+|++|||||||++++|++|++|
T Consensus        79 ~~~dlGia~DgDaDR~~~vd~~G~~i  104 (104)
T d1p5dx2          79 ENADLGLAFDGDGDRVGVVTNTGTII  104 (104)
T ss_dssp             TTCSEEEEECTTSSBEEEEETTCCEE
T ss_pred             CCCEEEEEECCCCCEEEEECCCCCCC
T ss_conf             68318999869887799998997799


No 6  
>d3pmga2 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.87  E-value=4.8e-23  Score=158.84  Aligned_cols=102  Identities=25%  Similarity=0.324  Sum_probs=89.5

Q ss_pred             HHHHHHHHHCCCCHH-HC-----CCCEEEEEECCCCCCCCCCCCC-CCCCCCCC-CCCCCCCCCCC--CCCCCCCHHHHH
Q ss_conf             666887763263102-11-----8966999844665433332221-23332222-22232223557--744221013777
Q gi|254780544|r  158 DRYIEHVKRTLPRDV-TL-----QGLRIVVDCANGASYKVAPEVF-WELGADVV-VIGDKPNGINI--NLDCGSTNVLSL  227 (448)
Q Consensus       158 ~~Yi~~l~~~~~~~~-~~-----~~lkvvvD~~~G~~~~~~~~il-~~lg~~~~-~i~~~pd~~~~--~~~~~~~~~~~l  227 (448)
                      +.|++++++.++.+. +.     +++||++||+||+++.+++++| +.+|+++. .+|++||+.|+  +|+|.++++..+
T Consensus         2 e~Y~~~l~~~id~~~I~~~~~~~~~lkIv~D~~nGa~~~~~~~il~~~~g~~~~~~~~~~pd~~f~~~~p~p~~~~~~~l   81 (113)
T d3pmga2           2 EAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADL   81 (113)
T ss_dssp             HHHHHHHHTTSCHHHHHHHHHSTTCCCEEEECTTSTTHHHHHHHHTTTTCCCGGGEESCSCCTTGGGSCCCCSTTTTHHH
T ss_pred             HHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             78999999855999999886137896899978877563221999987259951797568567787962575212478998


Q ss_pred             HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             64200234303675315521000133223755
Q gi|254780544|r  228 QRKVHEVRADIGIALDGDGDRVIIVDEKGAIV  259 (448)
Q Consensus       228 ~~~v~~~~ad~Gia~DgD~DR~~ivd~~G~~i  259 (448)
                      ++.+++.++|+|++|||||||++++|++|+++
T Consensus        82 ~~~~~~~~~dlgia~DgDaDR~~~vd~~G~~V  113 (113)
T d3pmga2          82 VETMKSGEHDFGAAFDGDGDRNMILGKHGFFV  113 (113)
T ss_dssp             HHHHHTSCCSEEEEECTTSSCEEEEEGGGCBC
T ss_pred             HHHHHCCCCEEEEEECCCCCEEEEECCCCCCC
T ss_conf             98762368569999868876378988995699


No 7  
>d3pmga3 c.84.1.1 (A:304-420) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.82  E-value=2e-21  Score=148.76  Aligned_cols=90  Identities=20%  Similarity=0.198  Sum_probs=85.0

Q ss_pred             CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             43332211360044432001211111233211011111028970013466236530100014442332024667775588
Q gi|254780544|r  281 NGIVTTVMSNIGLERFIAGLGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDK  360 (448)
Q Consensus       281 ~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~le~l~~~~~  360 (448)
                      ..|+.|++||.+++++++++|++++||+||||||.++|++.+++||||+|||++++ |.+++||++++++++++++++++
T Consensus        25 ~~Vv~tv~tS~~l~~i~~~~g~~~~~t~VG~k~i~~~m~~~~~~~GgE~Sg~~~~~-~~~~~Dgi~aal~~le~l~~~~~  103 (117)
T d3pmga3          25 RGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSD-HIREKDGLWAVLAWLSILATRKQ  103 (117)
T ss_dssp             CCEEEETTSCTHHHHHHHTSSSCEEEECSSHHHHHHHHHTTCCSEEEETTTEEEET-TSSSCCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEECCCHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             87746735898899989628605999157551200110027777874465774378-76778717999999999999399


Q ss_pred             CHHHHHHHHHH
Q ss_conf             88999986564
Q gi|254780544|r  361 PVSTICHCFEE  371 (448)
Q Consensus       361 ~l~~l~~~l~~  371 (448)
                      +++++++++++
T Consensus       104 ~lsel~~~l~~  114 (117)
T d3pmga3         104 SVEDILKDHWH  114 (117)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
T ss_conf             99999999998


No 8  
>d1kfia3 c.84.1.1 (A:324-443) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]}
Probab=99.80  E-value=3.1e-21  Score=147.63  Aligned_cols=103  Identities=19%  Similarity=0.171  Sum_probs=89.1

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCEEEEECCC
Q ss_conf             33113567777655320022343332211360044432001211111233211011111028970013466236530100
Q gi|254780544|r  260 NGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYG  339 (448)
Q Consensus       260 ~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~~g~E~sg~~~~~~~~  339 (448)
                      ++|+++.|++.+.+...... ..|+.|++||.+++++++++|++++||+||||||.++|++.+++||||+|||+++ +|.
T Consensus         2 p~D~l~~l~a~~~l~~~~g~-~~Vv~tv~tS~~~~~i~~~~g~~~~~t~vG~k~I~~~m~~~~~~~GgE~Sgg~~~-~~~   79 (120)
T d1kfia3           2 PSDSLAVIAANANLIFKNGL-LGAARSMPTSGALDKVAAKNGIKLFETPTGWKFFGNLMDAGLINLCGEESFGTGS-NHI   79 (120)
T ss_dssp             HHHHHHHHHHTHHHHSTTCC-CCEEEETTSCTHHHHHHHHHTCCEEEECSSTHHHHHHHHTTSCSEEEETTTEEEE-TTS
T ss_pred             CCHHHHHHHHHHHHHHHCCC-CEEEEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCEEEEECCCCCCCC-CCC
T ss_conf             72799999998999861799-7089977057889999984273589804733556521046877887157776678-887


Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCHHH
Q ss_conf             0144423320246677755888899
Q gi|254780544|r  340 STGDGLVAALQVLRYIKQYDKPVST  364 (448)
Q Consensus       340 ~~~Dgi~a~l~~le~l~~~~~~l~~  364 (448)
                      +++||+++++++|++++.+++++++
T Consensus        80 ~~kDgi~aal~~leila~~~k~~s~  104 (120)
T d1kfia3          80 REKDGIWAVLAWLTILAHKNKNTDH  104 (120)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTSSCSS
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf             7783799999999999997937221


No 9  
>d1kfia2 c.84.1.1 (A:206-323) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]}
Probab=99.77  E-value=4.1e-20  Score=140.73  Aligned_cols=101  Identities=21%  Similarity=0.238  Sum_probs=79.3

Q ss_pred             HHHHHHHHHCCCCHH-H----CCCCEEEEEECCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCC--CCCCCCHHHHH-
Q ss_conf             666887763263102-1----1896699984466543333222123332--222222322235577--44221013777-
Q gi|254780544|r  158 DRYIEHVKRTLPRDV-T----LQGLRIVVDCANGASYKVAPEVFWELGA--DVVVIGDKPNGININ--LDCGSTNVLSL-  227 (448)
Q Consensus       158 ~~Yi~~l~~~~~~~~-~----~~~lkvvvD~~~G~~~~~~~~il~~lg~--~~~~i~~~pd~~~~~--~~~~~~~~~~l-  227 (448)
                      +.|++++++.++.+. +    .+++||++||+||+++.+++++|+++++  .++.+|++||+.|++  |+|.++++..+ 
T Consensus         2 ~dY~~~l~~~~d~~~Ik~~~~~~~lkvv~D~~nGa~~~~~~~il~~~~~~~~~~~~~~~pD~~F~~~~p~p~~~~~~~l~   81 (118)
T d1kfia2           2 QDYTQLMQKLFDFDLLKGLFSNKDFSFRFDGMHGVAGPYAKHIFGTLLGCSKESLLNCDPSEDFGGGHPDPNLTYAHDLV   81 (118)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHTCTTCCEEEECTTSTHHHHHHHHHTTTTCCCGGGEESCSCCTTGGGSCCCCSTTTTHHHH
T ss_pred             HHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             78999999866999998651248977999678887667574788973798506876244588646745577776736677


Q ss_pred             ------HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             ------64200234303675315521000133223755
Q gi|254780544|r  228 ------QRKVHEVRADIGIALDGDGDRVIIVDEKGAIV  259 (448)
Q Consensus       228 ------~~~v~~~~ad~Gia~DgD~DR~~ivd~~G~~i  259 (448)
                            ++.+++.++|+|++|||||||++++ ++|.++
T Consensus        82 ~~l~~~~~~~~~~~~dlGia~DgDaDR~~Iv-~k~~fv  118 (118)
T d1kfia2          82 ELLDIHKKKDVGTVPQFGAACDGDADRNMIL-GRQFFV  118 (118)
T ss_dssp             HHTTTTCCSCGGGSCSEEEEECTTSCBEEEE-ETTEEE
T ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCCCCEEE-CCCCCC
T ss_conf             7899999998605996899977887870382-177489


No 10 
>d1wjwa_ d.129.2.1 (A:) Phosphoacetylglucosamine mutase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43  E-value=1.5e-13  Score=100.22  Aligned_cols=79  Identities=23%  Similarity=0.420  Sum_probs=62.3

Q ss_pred             HHHHCCCEEEEEECCCCCCCC----------HHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHH
Q ss_conf             656423000000056765115----------5899999876554307886599967798227999961599899999999
Q gi|254780544|r  368 CFEEYPQFLRSVSVKDTSILN----------SSSIVQAIADAESELRGIDRLIVRASGTESLIRIMAEGDDLSRIKRIVD  437 (448)
Q Consensus       368 ~l~~~~~~~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~~~~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~  437 (448)
                      .|.++|+...+++++++..+.          ...+++.+++....++ .+|++||||||||++|||+||.+++.++++++
T Consensus         9 ly~~lPq~linv~V~dk~~~~~~~~~~~~~~~~~lq~~Idgi~~~~~-~grvlIRpSGTEp~iRi~vEa~~~~~~~~i~~   87 (112)
T d1wjwa_           9 IYVDLPNRQLKVKVADRRVISTTDAERQAVTPPGLQEAINDLVKKYT-LARAFVRPSGTEDIVRVYAEANSQESADRLAY   87 (112)
T ss_dssp             CCCCCCEEEEEECCCCSSSSTTSCCCCSSSSSTTHHHHHHHHHHHSS-SEEEEEECSSSSSSEEEEEEESSHHHHHHHHH
T ss_pred             HHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCC-CEEEEEEECCCCCEEEEEEECCCHHHHHHHHH
T ss_conf             87757754046673784301232889886085989999999884058-65899986899744899986199999999999


Q ss_pred             HHHHHHHHHC
Q ss_conf             9999987520
Q gi|254780544|r  438 DLAKVIPMID  447 (448)
Q Consensus       438 ~~~~~i~~i~  447 (448)
                      ++.++|+.+-
T Consensus        88 ~i~~lv~~~~   97 (112)
T d1wjwa_          88 EVSLLVFQLA   97 (112)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHH
T ss_conf             9999999995


No 11 
>d1p5dx4 d.129.2.1 (X:368-463) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.27  E-value=5.4e-12  Score=90.57  Aligned_cols=68  Identities=25%  Similarity=0.361  Sum_probs=50.9

Q ss_pred             EEECCCCCCCCHHHHHHHHHHH----HH---HCCC------CCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf             0005676511558999998765----54---3078------865999677982279999615998999999999999987
Q gi|254780544|r  378 SVSVKDTSILNSSSIVQAIADA----ES---ELRG------IDRLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVIP  444 (448)
Q Consensus       378 ~~~~~~~~~~~~~~i~~~~~~~----~~---~~~~------~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~i~  444 (448)
                      ++.|++   .++..+++.+.+.    ..   .+||      .+|++||||||||++|+|+||.+++.++++.+++.++|+
T Consensus        10 ~i~~~d---~~K~~ii~~l~~~~~~~~~~i~~iDGvrv~~~dgW~liR~SnTEP~lri~~Ea~s~~~~~~l~~~~~~~l~   86 (96)
T d1p5dx4          10 NITVTE---DSKFAIIEALQRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLK   86 (96)
T ss_dssp             EEECCT---TTHHHHHHHHHHHCCCCSSEEECSSSEEEEETTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC---HHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf             442583---78888999999874104675135035289852628999867999779999988999999999999999999


Q ss_pred             HHCC
Q ss_conf             5209
Q gi|254780544|r  445 MIDS  448 (448)
Q Consensus       445 ~i~~  448 (448)
                      .+++
T Consensus        87 ~i~~   90 (96)
T d1p5dx4          87 AVDS   90 (96)
T ss_dssp             HHCT
T ss_pred             HHHH
T ss_conf             7533


No 12 
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=95.07  E-value=0.089  Score=27.51  Aligned_cols=87  Identities=14%  Similarity=0.155  Sum_probs=56.7

Q ss_pred             CEEEEECCCCC-CHHHHHHHHHHHHHHHHHCCCCCCEEE---EECCCCCHHHHHHHHHHHHHHCCCEEEEECC-CCHHHH
Q ss_conf             60155068778-899999999999999972379983899---9668779799999999999978987999626-780899
Q gi|254780544|r   10 GIRGKSNTFPI-TPNFMMRIGIAVGYLFRGKKKHRRVVI---GKDTRLSGYMLENSLVAGFTAAGMDAFILGP-IPSPAV   84 (448)
Q Consensus        10 GiRG~~~~~~~-t~~~v~~i~~a~~~~~~~~~~~~~vvV---g~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~-~ptP~l   84 (448)
                      +++|.++. ++ +.+-...+-.....+.+..+..++|++   |-|.+..+   +..++..|...|++|+++|. +|...+
T Consensus         5 ~~~gv~~~-~~~~~~~~e~lr~~~~~~~~~~gr~pkVlla~~g~D~Hd~G---~~~va~~l~~~G~eVi~lg~~~~~e~i   80 (168)
T d7reqa2           5 TISGVYSK-EVKNTPEVEEARELVEEFEQAEGRRPRILLAKMGQDGHDRG---QKVIATAYADLGFDVDVGPLFQTPEET   80 (168)
T ss_dssp             CCCSHHHH-HSCCCHHHHHHHHHHHHHHHHHSSCCEEEEECBTTCCCCHH---HHHHHHHHHHTTCEEEECCTTBCHHHH
T ss_pred             CCCEEEHH-HCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH---HHHHHHHHHHCCCCEECCCCCCCHHHH
T ss_conf             51413121-01788789999999999998608998699995786177899---999999998678514207876768999


Q ss_pred             HHHHHHHCCCEEEEEEE
Q ss_conf             99998719925898865
Q gi|254780544|r   85 AMLTRSLRADVGVMISA  101 (448)
Q Consensus        85 ~~a~~~~~~~gGI~iTa  101 (448)
                      .-++.+.+++ -|.|++
T Consensus        81 v~aa~~~~ad-vI~iSs   96 (168)
T d7reqa2          81 ARQAVEADVH-VVGVSS   96 (168)
T ss_dssp             HHHHHHHTCS-EEEEEE
T ss_pred             HHHHHCCCCC-EEEEEC
T ss_conf             9999715998-899955


No 13 
>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=93.81  E-value=0.15  Score=26.13  Aligned_cols=58  Identities=19%  Similarity=0.276  Sum_probs=46.6

Q ss_pred             CCCCEEEEE---CCCCCHHHHHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf             998389996---68779799999999999978987999626-780899999987199258988654
Q gi|254780544|r   41 KHRRVVIGK---DTRLSGYMLENSLVAGFTAAGMDAFILGP-IPSPAVAMLTRSLRADVGVMISAS  102 (448)
Q Consensus        41 ~~~~vvVg~---D~R~~s~~~~~~~~~gl~~~G~~V~~~g~-~ptP~l~~a~~~~~~~gGI~iTaS  102 (448)
                      ..++|++|.   |.+..+   ++.++..|.+.|.+|+++|. +|...+.-++++.+++ -|.+|++
T Consensus         5 ~~gkivi~tv~gD~HdiG---~~iv~~~l~~~G~~Vi~LG~~~p~e~~~~~~~~~~~d-~i~lS~l   66 (156)
T d3bula2           5 TNGKMVIATVKGDVHDIG---KNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNAD-LIGLSGL   66 (156)
T ss_dssp             CSCEEEEEEBTTCCCCHH---HHHHHHHHHTTTCEEEECCSSBCHHHHHHHHHHHTCS-EEEEECC
T ss_pred             CCCEEEEEEECCCHHHHH---HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCC-EEEEECC
T ss_conf             699799996188700688---9999999998898899779999999999999963998-8999645


No 14 
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=92.25  E-value=0.3  Score=24.27  Aligned_cols=58  Identities=24%  Similarity=0.417  Sum_probs=45.6

Q ss_pred             CCCEEEE---ECCCCCHHHHHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf             9838999---668779799999999999978987999626-7808999999871992589886547
Q gi|254780544|r   42 HRRVVIG---KDTRLSGYMLENSLVAGFTAAGMDAFILGP-IPSPAVAMLTRSLRADVGVMISASH  103 (448)
Q Consensus        42 ~~~vvVg---~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~-~ptP~l~~a~~~~~~~gGI~iTaSH  103 (448)
                      .++|++|   .|.+..+   +..++..|...|.+|+++|. +|...+--++.+.+++ -|.++.+.
T Consensus         3 k~kVvi~~~~gD~H~lG---~~mva~~l~~~G~~V~~LG~~~p~e~iv~a~~~~~~d-~v~lS~~~   64 (137)
T d1ccwa_           3 KKTIVLGVIGSDCHAVG---NKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKAD-AILVSSLY   64 (137)
T ss_dssp             CCEEEEEEETTCCCCHH---HHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCS-EEEEEECS
T ss_pred             CCEEEEEECCCCHHHHH---HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCC-EEEEEECC
T ss_conf             98799995498835889---9999999997897677223456999999999843987-78875114


No 15 
>d1nn4a_ c.121.1.1 (A:) Alternate ribose 5-phosphate isomerase B, RpiB {Escherichia coli [TaxId: 562]}
Probab=92.20  E-value=0.3  Score=24.23  Aligned_cols=58  Identities=22%  Similarity=0.436  Sum_probs=40.1

Q ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCC-----CHHHHHHH----HHHHCCCEEEEEEEC
Q ss_conf             8389996687797999999999999789879996267-----80899999----987199258988654
Q gi|254780544|r   43 RRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPI-----PSPAVAML----TRSLRADVGVMISAS  102 (448)
Q Consensus        43 ~~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~-----ptP~l~~a----~~~~~~~gGI~iTaS  102 (448)
                      ++|+||.|.  .+-.++..+..-|.+.|.+|.|+|.-     --|-..+.    +....++.||.|..|
T Consensus        15 kkI~igsDh--aG~~lK~~l~~~L~~~g~~V~D~G~~~~~~~DYpd~a~~va~~v~~~~~~~GIliCGt   81 (159)
T d1nn4a_          15 KKIAFGCDH--VGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAGGEVDGGILICGT   81 (159)
T ss_dssp             SEEEEEECT--TTHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESS
T ss_pred             EEEEEEECC--CHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             079998487--0699999999999987998997899866666851788899999873663058882587


No 16 
>d2vvpa1 c.121.1.1 (A:3-158) Alternate ribose 5-phosphate isomerase B, RpiB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=90.45  E-value=0.45  Score=23.13  Aligned_cols=57  Identities=25%  Similarity=0.489  Sum_probs=38.8

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCC------HHHHHH----HHHHHCCCEEEEEEEC
Q ss_conf             3899966877979999999999997898799962678------089999----9987199258988654
Q gi|254780544|r   44 RVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPIP------SPAVAM----LTRSLRADVGVMISAS  102 (448)
Q Consensus        44 ~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~p------tP~l~~----a~~~~~~~gGI~iTaS  102 (448)
                      +|+||.|  +.+..++..+..-|.+.|.+|+|+|...      -|....    .+....++-||.|..|
T Consensus         3 KI~igsD--h~G~~LK~~l~~~L~~~g~~viD~G~~~~~~~~dYpd~a~~va~~v~~~~~~~GIliCGt   69 (156)
T d2vvpa1           3 RVYLGAD--HAGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVADPGSLGIVLGGS   69 (156)
T ss_dssp             EEEEEEC--HHHHHHHHHHHHHHHHTTCEEEECSCCSCCTTCCHHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred             EEEEEEC--CCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf             8999857--757999999999999879989966997666777544789999998603556658986167


No 17 
>d1kfia4 d.129.2.1 (A:444-572) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]}
Probab=88.18  E-value=0.27  Score=24.56  Aligned_cols=25  Identities=44%  Similarity=0.461  Sum_probs=20.3

Q ss_pred             HCCCCCEEEEECCCCCC---EEEEEEEC
Q ss_conf             30788659996779822---79999615
Q gi|254780544|r  402 ELRGIDRLIVRASGTES---LIRIMAEG  426 (448)
Q Consensus       402 ~~~~~~w~liRpSgTEp---~iriy~Ea  426 (448)
                      .+++.+++.+|-|||-.   -||+|+|.
T Consensus        62 ~F~dGsRiVfRLSGTGs~GATiRlY~E~   89 (129)
T d1kfia4          62 VFGDGSRIIFRLSGTGSVGATIRIYFEQ   89 (129)
T ss_dssp             ECTTSCEEEEEECSSCSSSEEEEEEEEE
T ss_pred             EECCCCEEEEEECCCCCCCCEEEEEEEE
T ss_conf             9728978999945888898279987331


No 18 
>d3pmga4 d.129.2.1 (A:421-561) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=88.06  E-value=0.22  Score=25.05  Aligned_cols=25  Identities=36%  Similarity=0.466  Sum_probs=20.1

Q ss_pred             HCCCCCEEEEECCCCCC---EEEEEEEC
Q ss_conf             30788659996779822---79999615
Q gi|254780544|r  402 ELRGIDRLIVRASGTES---LIRIMAEG  426 (448)
Q Consensus       402 ~~~~~~w~liRpSgTEp---~iriy~Ea  426 (448)
                      .+++.+|+.+|-|||-.   -||+|+|.
T Consensus        72 ~F~dGsRiVfRLSGTGs~GATiRlY~E~   99 (141)
T d3pmga4          72 IFADGSRIIFRLSGTGSAGATIRLYIDS   99 (141)
T ss_dssp             EETTSCEEEEEEEECSSSCEEEEEEEEE
T ss_pred             EECCCCEEEEEECCCCCCCCEEEEEEEE
T ss_conf             9728978999945788998379999874


No 19 
>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}
Probab=80.56  E-value=1.2  Score=20.57  Aligned_cols=58  Identities=26%  Similarity=0.343  Sum_probs=43.2

Q ss_pred             CCCCCEEE---EECCCCCHHHHHHHHHHHHHHCC---------CEEEEECC-CCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             79983899---96687797999999999999789---------87999626-78089999998719925898865
Q gi|254780544|r   40 KKHRRVVI---GKDTRLSGYMLENSLVAGFTAAG---------MDAFILGP-IPSPAVAMLTRSLRADVGVMISA  101 (448)
Q Consensus        40 ~~~~~vvV---g~D~R~~s~~~~~~~~~gl~~~G---------~~V~~~g~-~ptP~l~~a~~~~~~~gGI~iTa  101 (448)
                      +...+|++   |-|.+.-+   ++.++..|..+|         ++|+++|. +|...+--++.+.+++ -|.+++
T Consensus        17 ~r~~~vv~~~~g~D~HdiG---~~iv~~~l~~~G~~~~~~~~~~eVi~LG~~vp~e~~v~~a~e~~~d-~VglS~   87 (160)
T d1xrsb1          17 GRKIVVVGASTGTDAHTVG---IDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVELEAD-VLLVSQ   87 (160)
T ss_dssp             CSCEEEEEEEBTTCCCCHH---HHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHHHTTCS-EEEEEC
T ss_pred             CCCCEEEEEEECCCHHHHH---HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCC-EEEEEE
T ss_conf             9986799997588477889---9999999997698542456624999678889999999999863999-999850


No 20 
>d1o1xa_ c.121.1.1 (A:) Putative sugar-phosphate isomerase {Thermotoga maritima [TaxId: 2336]}
Probab=77.50  E-value=1.8  Score=19.41  Aligned_cols=57  Identities=19%  Similarity=0.311  Sum_probs=34.8

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCC-----CHHHHHHH----HHHHCCCEEEEEEEC
Q ss_conf             389996687797999999999999789879996267-----80899999----987199258988654
Q gi|254780544|r   44 RVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPI-----PSPAVAML----TRSLRADVGVMISAS  102 (448)
Q Consensus        44 ~vvVg~D~R~~s~~~~~~~~~gl~~~G~~V~~~g~~-----ptP~l~~a----~~~~~~~gGI~iTaS  102 (448)
                      +|+||.|..  +-.++..+.+-|.+.|.+|.|+|..     .-|...+.    +....++-||.+..|
T Consensus         4 kI~igsDh~--G~~lK~~l~~~L~~~g~~v~D~G~~~~~~~dYpd~a~~va~~v~~~~~~~GIliCGt   69 (145)
T d1o1xa_           4 KIAIASDHA--AFELKEKVKNYLLGKGIEVEDHGTYSEESVDYPDYAKKVVQSILSNEADFGILLCGT   69 (145)
T ss_dssp             EEEEEECST--THHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSCSEEEEEESS
T ss_pred             EEEEEECCH--HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             899972870--799999999999977999997799977777834899999999734865679980587


No 21 
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]}
Probab=55.62  E-value=5.1  Score=16.64  Aligned_cols=38  Identities=21%  Similarity=0.169  Sum_probs=31.1

Q ss_pred             CCCEEEEECCCC-CHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf             983899966877-97999999999999789879996267
Q gi|254780544|r   42 HRRVVIGKDTRL-SGYMLENSLVAGFTAAGMDAFILGPI   79 (448)
Q Consensus        42 ~~~vvVg~D~R~-~s~~~~~~~~~gl~~~G~~V~~~g~~   79 (448)
                      .++|+|=|++.. +.+.++++++.+|.+.|++|..+...
T Consensus         2 ~~Ki~IiY~S~tGnTe~~A~~Ia~~l~~~g~ev~~~~~~   40 (152)
T d1e5da1           2 TNKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCK   40 (152)
T ss_dssp             CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             986999999988089999999999986579779983066


No 22 
>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}
Probab=46.86  E-value=2.2  Score=18.89  Aligned_cols=26  Identities=23%  Similarity=0.358  Sum_probs=19.3

Q ss_pred             CCCEEEEECC-CCHHHHHHHHHHHCCC
Q ss_conf             8987999626-7808999999871992
Q gi|254780544|r   69 AGMDAFILGP-IPSPAVAMLTRSLRAD   94 (448)
Q Consensus        69 ~G~~V~~~g~-~ptP~l~~a~~~~~~~   94 (448)
                      .|+.|++++. .+-|........+||+
T Consensus        10 ~GirVld~~~~~agp~~~~~Lad~GAe   36 (402)
T d1xk7a1          10 AGLRVVFSGIEIAGPFAGQMFAEWGAE   36 (402)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHTTCE
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHHCCE
T ss_conf             998888837802899999999982995


No 23 
>d1ad1a_ c.1.21.1 (A:) Dihydropteroate synthetase {Staphylococcus aureus [TaxId: 1280]}
Probab=45.23  E-value=7.5  Score=15.63  Aligned_cols=24  Identities=17%  Similarity=0.145  Sum_probs=9.9

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf             799999999999978987999626
Q gi|254780544|r   55 GYMLENSLVAGFTAAGMDAFILGP   78 (448)
Q Consensus        55 s~~~~~~~~~gl~~~G~~V~~~g~   78 (448)
                      +..-+..-+.-+.+.|.+++|+|.
T Consensus        24 ~~~~a~~~~~~m~~~GAdiIDIGa   47 (264)
T d1ad1a_          24 NVESAVTRVKAMMDEGADIIDVGG   47 (264)
T ss_dssp             SHHHHHHHHHHHHHTTCSEEEEES
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECC
T ss_conf             999999999999987998999788


No 24 
>d2b7oa1 c.1.10.8 (A:1-462) Probable DAHP synthetase AroG, phenylalanine-repressible {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=42.10  E-value=8.3  Score=15.33  Aligned_cols=30  Identities=17%  Similarity=0.318  Sum_probs=16.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf             889999999999999997237998389996687
Q gi|254780544|r   20 ITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTR   52 (448)
Q Consensus        20 ~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~R   52 (448)
                      .++.-+.++-.-++.+-.+   ..=++=|-|.=
T Consensus        59 V~a~Ei~~Lk~~La~va~G---~AFlLQgGDCA   88 (462)
T d2b7oa1          59 TVPSEIVRLQEQLAQVAKG---EAFLLQGGDCA   88 (462)
T ss_dssp             SCHHHHHHHHHHHHHHHTT---SCEEEEEECSS
T ss_pred             CCHHHHHHHHHHHHHHHCC---CEEEEECCCCC
T ss_conf             8899999999999999679---88998786434


No 25 
>d1knxa1 c.98.2.1 (A:1-132) HPr kinase/phoshatase HprK N-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=41.75  E-value=6.5  Score=16.00  Aligned_cols=74  Identities=7%  Similarity=-0.080  Sum_probs=44.2

Q ss_pred             ECCCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf             3155210001332237-----55331135677776553200223433322113600444320012111112332110111
Q gi|254780544|r  242 LDGDGDRVIIVDEKGA-----IVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDRYIME  316 (448)
Q Consensus       242 ~DgD~DR~~ivd~~G~-----~i~~d~~~~lla~~ll~~~~~~~~~vv~~v~ss~~i~~~a~~~g~~v~~t~vG~k~i~~  316 (448)
                      ||-+.+|+-++ ++.+     -+++++..-.+...+ + ...+.-.+......+..+-++|+++|+++.+|+..-..+..
T Consensus        46 f~~~~~RIQIl-G~~E~~Yl~~l~~e~r~~~l~~l~-~-~~~PciIvt~~~~~p~~l~~~a~~~~vPll~T~~~ts~li~  122 (132)
T d1knxa1          46 FSSQIGSVAIL-GKREFGFLSQKTLVEQQQILHNLL-K-LNPPAIILTKSFTDPTVLLQVNQTYQVPILKTDFFSTELSF  122 (132)
T ss_dssp             CCSCCCBCEEE-CHHHHHHHTTSCHHHHTTTHHHHH-T-TCCSCEEEETTTCCCHHHHHHGGGTCCCEEEESSCGGGGTT
T ss_pred             CCCCCCEEEEE-CHHHHHHHHHCCHHHHHHHHHHHH-C-CCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCHHHHHH
T ss_conf             02688858998-799999999689999999999984-7-69988999797999999999999829968981861999999


Q ss_pred             HH
Q ss_conf             11
Q gi|254780544|r  317 YM  318 (448)
Q Consensus       317 ~~  318 (448)
                      .+
T Consensus       123 ~l  124 (132)
T d1knxa1         123 TV  124 (132)
T ss_dssp             TH
T ss_pred             HH
T ss_conf             99


No 26 
>d2fzva1 c.23.5.4 (A:1-233) Putative arsenical resistance protein {Shigella flexneri [TaxId: 623]}
Probab=37.64  E-value=9.8  Score=14.90  Aligned_cols=36  Identities=11%  Similarity=0.095  Sum_probs=27.1

Q ss_pred             CEEEEECCCCC--HHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf             38999668779--7999999999999789879996267
Q gi|254780544|r   44 RVVIGKDTRLS--GYMLENSLVAGFTAAGMDAFILGPI   79 (448)
Q Consensus        44 ~vvVg~D~R~~--s~~~~~~~~~gl~~~G~~V~~~g~~   79 (448)
                      -++|..-.|..  ++.+++.+++.+...|++|..+.+.
T Consensus        37 Il~I~GS~R~~s~s~~la~~~~~~l~~~G~ev~~idL~   74 (233)
T d2fzva1          37 ILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPS   74 (233)
T ss_dssp             EEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCCT
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf             99995989998878999999999710367389997467


No 27 
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}
Probab=36.58  E-value=10  Score=14.79  Aligned_cols=38  Identities=21%  Similarity=0.302  Sum_probs=30.1

Q ss_pred             CCCEEEEECCCCCH-HHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf             98389996687797-999999999999789879996267
Q gi|254780544|r   42 HRRVVIGKDTRLSG-YMLENSLVAGFTAAGMDAFILGPI   79 (448)
Q Consensus        42 ~~~vvVg~D~R~~s-~~~~~~~~~gl~~~G~~V~~~g~~   79 (448)
                      ..+++|=|+++..+ +.+++++++++.+.|++|..+...
T Consensus         2 k~K~lIvY~S~~GnT~~vA~~Ia~~l~~~g~~v~~~~~~   40 (149)
T d1ycga1           2 KAKAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLS   40 (149)
T ss_dssp             CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGG
T ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             967999999998089999999999987569826999714


No 28 
>d2a5la1 c.23.5.8 (A:3-198) Trp repressor binding protein WrbA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=34.81  E-value=11  Score=14.62  Aligned_cols=40  Identities=10%  Similarity=0.106  Sum_probs=32.8

Q ss_pred             CCCEEEEECCCCC-HHHHHHHHHHHHHHCCCEEEEECCCCH
Q ss_conf             9838999668779-799999999999978987999626780
Q gi|254780544|r   42 HRRVVIGKDTRLS-GYMLENSLVAGFTAAGMDAFILGPIPS   81 (448)
Q Consensus        42 ~~~vvVg~D~R~~-s~~~~~~~~~gl~~~G~~V~~~g~~pt   81 (448)
                      +++|+|=+..+.. ...+++++++|+.+.|++|..+....+
T Consensus         1 ~~Kvliiy~S~~GnT~~la~~i~~g~~~~g~e~~~~~~~~~   41 (196)
T d2a5la1           1 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAV   41 (196)
T ss_dssp             CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCCE
T ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             98699999389808999999999998636977999853554


No 29 
>d1rvga_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Thermus aquaticus [TaxId: 271]}
Probab=33.25  E-value=11  Score=14.46  Aligned_cols=87  Identities=21%  Similarity=0.198  Sum_probs=54.7

Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECC---CCCHHHHHHHHHHHHHHCCCEEEE-ECCCCH-HHHHHH
Q ss_conf             550687788999999999999999723799838999668---779799999999999978987999-626780-899999
Q gi|254780544|r   13 GKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDT---RLSGYMLENSLVAGFTAAGMDAFI-LGPIPS-PAVAML   87 (448)
Q Consensus        13 G~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~vvVg~D~---R~~s~~~~~~~~~gl~~~G~~V~~-~g~~pt-P~l~~a   87 (448)
                      |-+|.  .|.+.+..+-.|-.      ..+++|++..-.   .+.+..+...+.......++.|.. +.-+.+ -.+..+
T Consensus        20 ~AfN~--~n~e~~~avi~AAe------e~~sPvIiq~s~~~~~~~~~~~~~~~~~~a~~~~vpv~lHlDH~~~~e~i~~a   91 (305)
T d1rvga_          20 GAFNV--NNMEFLQAVLEAAE------EQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSYESVLRA   91 (305)
T ss_dssp             EEEEC--CSHHHHHHHHHHHH------HTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEECSHHHHHHH
T ss_pred             EEEEE--CCHHHHHHHHHHHH------HHCCCEEEECCCCHHHHCCHHHHHHHHHHHHCCCCCEEEEEHHCCCHHHHHHH
T ss_conf             99887--99999999999999------97999999987447767027899999998751699589860210474666788


Q ss_pred             HHHHCCCEEEEEEECCCCCCCE
Q ss_conf             9871992589886547775201
Q gi|254780544|r   88 TRSLRADVGVMISASHNPYQDN  109 (448)
Q Consensus        88 ~~~~~~~gGI~iTaSHNP~~~n  109 (448)
                      + +.+++ .+|+-+||-|.++|
T Consensus        92 i-~~Gft-SVMiDgS~l~~eeN  111 (305)
T d1rvga_          92 L-RAGFT-SVMIDKSHEDFETN  111 (305)
T ss_dssp             H-HTTCS-EEEECCTTSCHHHH
T ss_pred             H-HCCCC-EEEECCCCCCHHHH
T ss_conf             7-55886-68876863247999


No 30 
>d2npta1 d.15.2.2 (A:4-108) Mitogen activated protein kinase kinase 5, Map2k5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.71  E-value=7.8  Score=15.51  Aligned_cols=27  Identities=22%  Similarity=0.479  Sum_probs=20.5

Q ss_pred             ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             3155210001332237553311356777765532
Q gi|254780544|r  242 LDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSH  275 (448)
Q Consensus       242 ~DgD~DR~~ivd~~G~~i~~d~~~~lla~~ll~~  275 (448)
                      =|-||||+.+-       +.+++-||+..|+..-
T Consensus        60 EDEdGDRITVR-------SDEEl~AMisyy~~~~   86 (105)
T d2npta1          60 EDEDGDRITVR-------SDEEMKAMLSYYYSTV   86 (105)
T ss_dssp             ECTTSCEEEEC-------SHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEC-------CHHHHHHHHHHHHHHH
T ss_conf             25658876872-------6799999999999999


No 31 
>d2qn6b1 d.58.51.1 (B:176-264) eIF-2-alpha, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=32.06  E-value=12  Score=14.34  Aligned_cols=56  Identities=11%  Similarity=0.163  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHHH----CCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf             58999998765543----0788659996779822799996159989999999999999875
Q gi|254780544|r  389 SSSIVQAIADAESE----LRGIDRLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVIPM  445 (448)
Q Consensus       389 ~~~i~~~~~~~~~~----~~~~~w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~i~~  445 (448)
                      .+.+.+.+......    ....--+-|+--| -|..|+-+.+.|.+.++++++++.+.+..
T Consensus        18 Ie~IK~aL~~a~~~~~~~~~~d~~i~i~~ig-aP~Yri~v~a~D~k~ae~~l~~a~~~i~~   77 (89)
T d2qn6b1          18 VEKIKEVISKALENIEQDYESLLNIKIYTIG-APRYRVDVVGTNPKEASEALNQIISNLIK   77 (89)
T ss_dssp             HHHHHHHHHHHHTTHHHHCTTEEEEEEEESS-TTEEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC-CCEEEEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf             9999999999997230125778518999966-98089999807899999999999999999


No 32 
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=29.99  E-value=13  Score=14.13  Aligned_cols=16  Identities=19%  Similarity=0.289  Sum_probs=10.9

Q ss_pred             CCCEEEEEECCCCCCC
Q ss_conf             5201256403654567
Q gi|254780544|r  106 YQDNGIKLFGPDGYKV  121 (448)
Q Consensus       106 ~~~nGiK~~~~~G~~i  121 (448)
                      .|.+|.+|++.+|.+.
T Consensus        15 ~e~~G~~~~~~~g~~~   30 (334)
T d1foba_          15 LEDEGYSYKNLNGQTQ   30 (334)
T ss_dssp             HHHTTCCCBCTTSCBC
T ss_pred             HHHCCCEEECCCCCCC
T ss_conf             9978977999999804


No 33 
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.09  E-value=10  Score=14.81  Aligned_cols=58  Identities=19%  Similarity=0.212  Sum_probs=35.2

Q ss_pred             CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE
Q ss_conf             66999844665433332221233322222223222355774422101377764200234303
Q gi|254780544|r  177 LRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADI  238 (448)
Q Consensus       177 lkvvvD~~~G~~~~~~~~il~~lg~~~~~i~~~pd~~~~~~~~~~~~~~~l~~~v~~~~ad~  238 (448)
                      -|++| ...|..+.-+..+|.++|++++.+...+... |..+  ++-...+++..++.+.++
T Consensus        24 ~~~vI-iG~G~ig~E~A~~l~~lG~~Vtii~~~~~~l-~~~d--~ei~~~l~~~l~~~GV~i   81 (122)
T d1v59a2          24 KRLTI-IGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG-ASMD--GEVAKATQKFLKKQGLDF   81 (122)
T ss_dssp             SEEEE-ECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-SSSC--HHHHHHHHHHHHHTTCEE
T ss_pred             CEEEE-ECCCCHHHHHHHHHHHHCCCEEEEEECCCCC-HHHH--HHHHHHHHHHHHHCCCEE
T ss_conf             83999-9877068899999986085146898556323-3454--434899999997255148


No 34 
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=26.71  E-value=15  Score=13.77  Aligned_cols=60  Identities=10%  Similarity=0.179  Sum_probs=37.5

Q ss_pred             CCCCEEEEECCCC-CHHHHHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHH-HHCCCEEEEEEE
Q ss_conf             9983899966877-979999999999997898799962--678089999998-719925898865
Q gi|254780544|r   41 KHRRVVIGKDTRL-SGYMLENSLVAGFTAAGMDAFILG--PIPSPAVAMLTR-SLRADVGVMISA  101 (448)
Q Consensus        41 ~~~~vvVg~D~R~-~s~~~~~~~~~gl~~~G~~V~~~g--~~ptP~l~~a~~-~~~~~gGI~iTa  101 (448)
                      ...+|+|-|.+.. +++.+++.++++|.+.|++|..+.  ....+-+..... -.+++ +|++-+
T Consensus         2 ~~~kv~IiY~S~tGnTe~~A~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~d-~iiigs   65 (148)
T d1vmea1           2 KKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSE-ALIFGV   65 (148)
T ss_dssp             CTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCS-EEEEEE
T ss_pred             CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCC-EEEEEE
T ss_conf             9888999999988189999999999998679969999645443210567664497788-869993


No 35 
>d1j3wa_ d.110.7.1 (A:) Giding protein MglB {Thermus thermophilus [TaxId: 274]}
Probab=23.44  E-value=15  Score=13.80  Aligned_cols=45  Identities=16%  Similarity=0.110  Sum_probs=26.8

Q ss_pred             HHHHCCCCCCEEEEECCCCCCCCCCCCCC--CCCCCCHHHHHHHHHH
Q ss_conf             64200234303675315521000133223--7553311356777765
Q gi|254780544|r  228 QRKVHEVRADIGIALDGDGDRVIIVDEKG--AIVNGDQIMALIAREW  272 (448)
Q Consensus       228 ~~~v~~~~ad~Gia~DgD~DR~~ivd~~G--~~i~~d~~~~lla~~l  272 (448)
                      .+.++..+.+..+..|.||=.+.-....|  .-.+.+.+.++.+-.+
T Consensus        16 ~~l~~~~Gv~~a~lvs~dGl~ia~~~~~~~~~~~d~~~lAA~~a~~~   62 (134)
T d1j3wa_          16 EETLRETGARYALLIDRKGFVLAHKEALWAPKPPPLDTLATLVAGNA   62 (134)
T ss_dssp             HHHHHHHCCSEEEEEETTSCEEEEEECTTSCCCSCHHHHHHHHHHHH
T ss_pred             HHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
T ss_conf             99862249609999989986888635767876112999999999999


No 36 
>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.05  E-value=7.8  Score=15.51  Aligned_cols=26  Identities=35%  Similarity=0.498  Sum_probs=17.7

Q ss_pred             CCCEEEEECC-CCHHHHHHHHHHHCCC
Q ss_conf             8987999626-7808999999871992
Q gi|254780544|r   69 AGMDAFILGP-IPSPAVAMLTRSLRAD   94 (448)
Q Consensus        69 ~G~~V~~~g~-~ptP~l~~a~~~~~~~   94 (448)
                      .|+.|++++. .+-|........++|.
T Consensus         5 ~girVld~~~~~agp~~~~~lad~GA~   31 (359)
T d1x74a1           5 SGLRVVELAGIGPGPHAAMILGDLGAD   31 (359)
T ss_dssp             TTCEEEEECCSTHHHHHHHHHHHTTCE
T ss_pred             CCCEEEECCCCHHHHHHHHHHHHHCCE
T ss_conf             998999827830899999999983997


No 37 
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}
Probab=21.33  E-value=19  Score=13.13  Aligned_cols=56  Identities=16%  Similarity=0.140  Sum_probs=31.3

Q ss_pred             CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             966999844665433332221233322222223222355774422101377764200234
Q gi|254780544|r  176 GLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVR  235 (448)
Q Consensus       176 ~lkvvvD~~~G~~~~~~~~il~~lg~~~~~i~~~pd~~~~~~~~~~~~~~~l~~~v~~~~  235 (448)
                      |-+++| ...|..+.-+...|.++|++++.+...+.. .++.++.  -...+.+...+.+
T Consensus        21 p~~vvI-iGgG~~G~E~A~~l~~~g~~Vtlve~~~~i-l~~~d~~--~~~~l~~~l~~~g   76 (115)
T d1lvla2          21 PQHLVV-VGGGYIGLELGIAYRKLGAQVSVVEARERI-LPTYDSE--LTAPVAESLKKLG   76 (115)
T ss_dssp             CSEEEE-ECCSHHHHHHHHHHHHHTCEEEEECSSSSS-STTSCHH--HHHHHHHHHHHHT
T ss_pred             CCEEEE-ECCCHHHHHHHHHHHHCCCCEEEEEEECCC-CCCCCCH--HHHHHHHHHHHHC
T ss_conf             986999-999778999999984326612788540000-4653202--6799999998601


No 38 
>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]}
Probab=20.08  E-value=8.2  Score=15.38  Aligned_cols=26  Identities=19%  Similarity=0.303  Sum_probs=18.3

Q ss_pred             CCCEEEEECC-CCHHHHHHHHHHHCCC
Q ss_conf             8987999626-7808999999871992
Q gi|254780544|r   69 AGMDAFILGP-IPSPAVAMLTRSLRAD   94 (448)
Q Consensus        69 ~G~~V~~~g~-~ptP~l~~a~~~~~~~   94 (448)
                      .|+.|++++. .+-|........+||+
T Consensus         5 ~GirVld~~~~~agp~~~~~LadlGAe   31 (427)
T d2vjma1           5 DGINVLDFTHVQAGPACTQMMGFLGAN   31 (427)
T ss_dssp             TTCEEEECCCTTHHHHHHHHHHHTTCE
T ss_pred             CCCEEEECCCHHHHHHHHHHHHHHCCE
T ss_conf             998999927715899999999983995


Done!