RPS-BLAST 2.2.22 [Sep-27-2009]
Database: CddB
21,608 sequences; 5,994,473 total letters
Searching..................................................done
Query= gi|254780544|ref|YP_003064957.1| phosphoglucosamine mutase
protein [Candidatus Liberibacter asiaticus str. psy62]
(448 letters)
>gnl|CDD|184615 PRK14315, glmM, phosphoglucosamine mutase; Provisional.
Length = 448
Score = 747 bits (1932), Expect = 0.0
Identities = 280/444 (63%), Positives = 346/444 (77%), Gaps = 2/444 (0%)
Query: 1 MKRRFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLF-RGKKKHRRVVIGKDTRLSGYMLE 59
M R++FGTDGIRG++NTFP+T +R+G A G F RG +HR VVIGKDTRLSGYM+E
Sbjct: 1 MTRKYFGTDGIRGRANTFPMTAELALRVGQAAGLYFRRGDHRHR-VVIGKDTRLSGYMIE 59
Query: 60 NSLVAGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGY 119
N+LVAGFT+ GMD +LGPIP+PAVAMLTRS+RAD+GVMISASHNP++DNGIKLFGPDG+
Sbjct: 60 NALVAGFTSVGMDVLLLGPIPTPAVAMLTRSMRADLGVMISASHNPFEDNGIKLFGPDGF 119
Query: 120 KVSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRI 179
K+S +IE IE LL+ DL L+ IG AKR+D H RYIE KRTLPRD+ L GLR+
Sbjct: 120 KLSDEIELEIEALLDGDLDKRLAAPADIGRAKRIDDAHGRYIEFAKRTLPRDLRLDGLRV 179
Query: 180 VVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIG 239
VVDCANGA+YKVAPE WELGA+V+ IG +PNG NIN +CGST+ +L +KV EVRADIG
Sbjct: 180 VVDCANGAAYKVAPEALWELGAEVITIGVEPNGFNINEECGSTHPEALAKKVREVRADIG 239
Query: 240 IALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAG 299
IALDGD DRVIIVDEKG +V+GDQ+MALIA W LRG GIV TVMSN+GLERF+A
Sbjct: 240 IALDGDADRVIIVDEKGHVVDGDQLMALIAESWAEDGRLRGGGIVATVMSNLGLERFLAD 299
Query: 300 LGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYD 359
GL+L+RT VGDRY++E+M+ GFN+GGEQSGHI+LSDY +TGDGLVAALQVL + +
Sbjct: 300 RGLTLERTAVGDRYVVEHMREGGFNLGGEQSGHIVLSDYATTGDGLVAALQVLAVVVRSG 359
Query: 360 KPVSTICHCFEEYPQFLRSVSVKDTSILNSSSIVQAIADAESELRGIDRLIVRASGTESL 419
+P S +C FE PQ L++V L +S+ AIADAE+ L G RL++R SGTE L
Sbjct: 360 RPASEVCRRFEPVPQLLKNVRYSGGKPLEDASVKSAIADAEARLNGSGRLLIRPSGTEPL 419
Query: 420 IRIMAEGDDLSRIKRIVDDLAKVI 443
IR+MAEGDD + ++ +VD++ +
Sbjct: 420 IRVMAEGDDRALVEEVVDEIVDAV 443
>gnl|CDD|182812 PRK10887, glmM, phosphoglucosamine mutase; Provisional.
Length = 443
Score = 619 bits (1599), Expect = e-178
Identities = 215/445 (48%), Positives = 311/445 (69%), Gaps = 10/445 (2%)
Query: 3 RRFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSL 62
R++FGTDGIRGK PITP+F++++G A G + ++ +V+IGKDTR+SGYMLE++L
Sbjct: 1 RKYFGTDGIRGKVGQAPITPDFVLKLGWAAGKVLA-RQGRPKVLIGKDTRISGYMLESAL 59
Query: 63 VAGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVS 122
AG AAG+D + GP+P+PAVA LTR+LRA+ G++ISASHNPY DNGIK F DG K+
Sbjct: 60 EAGLAAAGVDVLLTGPMPTPAVAYLTRTLRAEAGIVISASHNPYYDNGIKFFSADGTKLP 119
Query: 123 TDIEDRIETLLEDDLTSYLSCYDS--IGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRIV 180
++E IE L+ LT C +S +G A R++ RYIE K T P +++L+GL+IV
Sbjct: 120 DEVELAIEAELDKPLT----CVESAELGKASRINDAAGRYIEFCKSTFPNELSLRGLKIV 175
Query: 181 VDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIGI 240
VDCANGA+Y +AP VF ELGA+V+ IG +PNG+NIN +CG+T+ +LQ V +AD+GI
Sbjct: 176 VDCANGATYHIAPNVFRELGAEVIAIGCEPNGLNINDECGATDPEALQAAVLAEKADLGI 235
Query: 241 ALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGL 300
A DGDGDRVI+VD G +V+GDQ++ +IAR+ + LRG G+V T+MSN+GLE + L
Sbjct: 236 AFDGDGDRVIMVDHLGNLVDGDQLLYIIARDRLRRGQLRG-GVVGTLMSNMGLELALKQL 294
Query: 301 GLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDK 360
G+ R +VGDRY++E ++ G+ +GGE SGHI+ D +TGDG+VAALQVL + +
Sbjct: 295 GIPFVRAKVGDRYVLEKLQEKGWRLGGENSGHILCLDKTTTGDGIVAALQVLAAMVRSGM 354
Query: 361 PVSTICHCFEEYPQFLRSVSVK--DTSILNSSSIVQAIADAESELRGIDRLIVRASGTES 418
++ +C + +PQ L +V K L S ++ A+A+ E+EL G R+++R SGTE
Sbjct: 355 SLADLCSGMKLFPQVLINVRFKPGADDPLESEAVKAALAEVEAELGGRGRVLLRKSGTEP 414
Query: 419 LIRIMAEGDDLSRIKRIVDDLAKVI 443
LIR+M EG+D +++ + + +A +
Sbjct: 415 LIRVMVEGEDEAQVTALAERIADAV 439
>gnl|CDD|130522 TIGR01455, glmM, phosphoglucosamine mutase. This model describes
GlmM, phosphoglucosamine mutase, also designated in MrsA
and YhbF E. coli, UreC in Helicobacter pylori, and
femR315 or FemD in Staphlococcus aureus. It converts
glucosamine-6-phosphate to glucosamine-1-phosphate as
part of the pathway toward UDP-N-acetylglucosamine for
peptidoglycan and lipopolysaccharides.
Length = 443
Score = 587 bits (1516), Expect = e-168
Identities = 234/441 (53%), Positives = 308/441 (69%), Gaps = 3/441 (0%)
Query: 6 FGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHR-RVVIGKDTRLSGYMLENSLVA 64
FGTDG+RG++ P+T + +G A G + R + RVVIGKDTRLSGYMLEN+L A
Sbjct: 1 FGTDGVRGRAGQEPLTAELALLLGAAAGRVLRQGRDTAPRVVIGKDTRLSGYMLENALAA 60
Query: 65 GFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTD 124
G +AG+D +LGP+P+PAVA LTR+LRAD GVMISASHNPY+DNGIK FGP G+K+
Sbjct: 61 GLNSAGVDVLLLGPLPTPAVAYLTRTLRADAGVMISASHNPYEDNGIKFFGPGGFKLDDA 120
Query: 125 IEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRIVVDCA 184
E IE LL++ + +G KR RYIE +K TLPR +TL GL++V+DCA
Sbjct: 121 TEAAIEALLDEADPLPRPESEGLGRVKRYPDAVGRYIEFLKSTLPRGLTLSGLKVVLDCA 180
Query: 185 NGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIGIALDG 244
NGA+YKVAP VF ELGA+V+ IG +P+G+NIN CGST++ +LQ+ V E AD+GIA DG
Sbjct: 181 NGAAYKVAPHVFRELGAEVIAIGVEPDGLNINDGCGSTHLDALQKAVREHGADLGIAFDG 240
Query: 245 DGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSL 304
D DRV+ VD G IV+GDQI+ +IAR L GN +V TVMSN+GLER + LGL+L
Sbjct: 241 DADRVLAVDANGRIVDGDQILYIIARALKESGELAGNTVVATVMSNLGLERALEKLGLTL 300
Query: 305 KRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKPVST 364
RT VGDRY++E M+ +G+N+GGEQSGHIIL DY +TGDG+V+ALQVL +K+ +S
Sbjct: 301 IRTAVGDRYVLEEMRESGYNLGGEQSGHIILLDYSTTGDGIVSALQVLTIMKKSGSTLSE 360
Query: 365 ICHCFEEYPQFLRSVSVKD--TSILNSSSIVQAIADAESELRGIDRLIVRASGTESLIRI 422
+ F YPQ L +V V D + + ++ AI DAE+EL G R+++R SGTE LIR+
Sbjct: 361 LAAEFVPYPQTLVNVRVADRKLAAAEAPAVKAAIEDAEAELGGTGRILLRPSGTEPLIRV 420
Query: 423 MAEGDDLSRIKRIVDDLAKVI 443
M E D ++++ D LA V+
Sbjct: 421 MVEAADEELVQQLADTLADVV 441
>gnl|CDD|184614 PRK14314, glmM, phosphoglucosamine mutase; Provisional.
Length = 450
Score = 586 bits (1513), Expect = e-168
Identities = 221/445 (49%), Positives = 309/445 (69%), Gaps = 2/445 (0%)
Query: 1 MKRRFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLEN 60
M ++ FGTDG+RG++N +P+T +++G A Y+FR RVVIGKDTRLSGYM EN
Sbjct: 1 MMKKLFGTDGVRGRANVYPMTAEMALQLGRAAAYVFRNGSGRHRVVIGKDTRLSGYMFEN 60
Query: 61 SLVAGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYK 120
+L+AG + G+D ++GP+P+P +A +TRS+RAD GV+ISASHNPYQDNGIK F DG+K
Sbjct: 61 ALIAGLCSMGVDVLLVGPLPTPGIAFITRSMRADAGVVISASHNPYQDNGIKFFSSDGFK 120
Query: 121 VSTDIEDRIETLLED-DLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRI 179
+ ++E RIE ++ D L ++G AKR+D RYI +K T P+ +TL+GL+I
Sbjct: 121 LPDEVELRIEAMVLSKDFDWLLPDAHAVGKAKRIDDAPGRYIVFLKATFPKGLTLKGLKI 180
Query: 180 VVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIG 239
V+DCANGA+YKVAP VF ELGA+V+ IG +PNG+NIN CGS + + + V E AD+G
Sbjct: 181 VLDCANGAAYKVAPAVFEELGAEVICIGVEPNGLNINAGCGSLHPEVIAKAVIEHGADLG 240
Query: 240 IALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAG 299
IALDGD DR+I+VDEKG IV+GDQIMA+ A + L N +V TVMSN+GLE +
Sbjct: 241 IALDGDADRLIVVDEKGHIVDGDQIMAICATDLKKRGALPKNTLVATVMSNMGLEVAMKE 300
Query: 300 LGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYD 359
LG + RT VGDRY++E M+ G N+GGEQSGH+I D+ +TGDG+++ALQVLR + +
Sbjct: 301 LGGQVLRTPVGDRYVVEEMRRGGANLGGEQSGHLIFLDHNTTGDGILSALQVLRIMIESG 360
Query: 360 KPVSTICHCFEEYPQFLRSVSVKDTSILNS-SSIVQAIADAESELRGIDRLIVRASGTES 418
KP+S + E +PQ L +V VK+ L + + +AI D E L R+++R SGTE+
Sbjct: 361 KPLSELAGLLEPFPQALINVRVKEKIPLETLPEVAKAIKDVEEALGDSGRVLLRYSGTEN 420
Query: 419 LIRIMAEGDDLSRIKRIVDDLAKVI 443
L R+M EG+D ++ + ++A V+
Sbjct: 421 LCRVMVEGEDKHQVDSLAKEIADVV 445
>gnl|CDD|184616 PRK14316, glmM, phosphoglucosamine mutase; Provisional.
Length = 448
Score = 519 bits (1339), Expect = e-148
Identities = 201/445 (45%), Positives = 288/445 (64%), Gaps = 10/445 (2%)
Query: 4 RFFGTDGIRGKSNTFPITPNFMMRIGIAVGY-LFRGKKKHRRVVIGKDTRLSGYMLENSL 62
++FGTDG+RG +N +TP ++G A GY L + + + +V++G+DTR+SG MLE++L
Sbjct: 2 KYFGTDGVRGVANK-ELTPELAFKLGRAGGYVLTKHETERPKVLVGRDTRISGDMLESAL 60
Query: 63 VAGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVS 122
+AG + G + LG IP+P VA LTR+L AD GVMISASHNP +DNGIK FG DG+K+S
Sbjct: 61 IAGLLSVGAEVMRLGVIPTPGVAYLTRALGADAGVMISASHNPVEDNGIKFFGSDGFKLS 120
Query: 123 TDIEDRIETLL---EDDLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRI 179
+ ED IE LL ED L + +G +Y++ +K T+ D L GL++
Sbjct: 121 DEQEDEIEALLDAEEDTLPRPSG--EGLGTVSDYPEGLRKYLQFLKSTIDED--LSGLKV 176
Query: 180 VVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIG 239
+DCANGA+ +AP +F +LGADV VIG P+G+NIN GST+ +LQ V E AD+G
Sbjct: 177 ALDCANGATSSLAPRLFADLGADVTVIGTSPDGLNINDGVGSTHPEALQELVVEKGADLG 236
Query: 240 IALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAG 299
+A DGD DR+I VDE G IV+GD+IM + + L+ N IVTTVMSN+G + +
Sbjct: 237 LAFDGDADRLIAVDENGNIVDGDKIMFICGKYLKEKGRLKKNTIVTTVMSNLGFYKALEE 296
Query: 300 LGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYD 359
G++ +T+VGDRY++E M+ G+N+GGEQSGHII DY +TGDGL+ ALQ+ + +K+
Sbjct: 297 EGINSVKTKVGDRYVVEEMRKGGYNLGGEQSGHIIFLDYNTTGDGLLTALQLAKVMKETG 356
Query: 360 KPVSTICHCFEEYPQFLRSVSVKD-TSILNSSSIVQAIADAESELRGIDRLIVRASGTES 418
K +S + ++YPQ L +V V D + + I + I E E+ G R++VR SGTE
Sbjct: 357 KKLSELAAEMKKYPQKLVNVRVTDKKKAMENPEIKEIIEKVEEEMAGNGRVLVRPSGTEP 416
Query: 419 LIRIMAEGDDLSRIKRIVDDLAKVI 443
L+R+MAE + + VD +A V+
Sbjct: 417 LVRVMAEAPTQEEVDKYVDRIADVV 441
>gnl|CDD|184621 PRK14324, glmM, phosphoglucosamine mutase; Provisional.
Length = 446
Score = 494 bits (1275), Expect = e-140
Identities = 210/443 (47%), Positives = 292/443 (65%), Gaps = 7/443 (1%)
Query: 1 MKRRFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLEN 60
MK FGTDG+RGK+ +T MR+ +A G F+ ++++GKDTR SGYM+EN
Sbjct: 1 MK--LFGTDGVRGKAGEK-LTAFLAMRLAMAAGIYFKKHSITNKILVGKDTRRSGYMIEN 57
Query: 61 SLVAGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYK 120
+LV+G T+ G + +GP+P+PA+A LT +R D G+MISASHNPY DNGIK F G K
Sbjct: 58 ALVSGLTSVGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNPYYDNGIKFFDSYGNK 117
Query: 121 VSTDIEDRIETLLEDD--LTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLR 178
+ + E IE + D+ + S + IG AKR+D V RYI H+K + P+D+TL+GLR
Sbjct: 118 LDEEEEKEIEEIFFDEELIQSSQKTGEEIGSAKRIDDVIGRYIVHIKNSFPKDLTLKGLR 177
Query: 179 IVVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADI 238
IV+D ANGA+YKVAP VF ELGADV+VI D+PNG NIN +CG+ + +L ++V RADI
Sbjct: 178 IVLDTANGAAYKVAPTVFSELGADVIVINDEPNGFNINENCGALHPENLAQEVKRYRADI 237
Query: 239 GIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIA 298
G A DGD DR+++VDEKG IV+GD+++ ++A L+ IV TVMSN+ LE ++
Sbjct: 238 GFAFDGDADRLVVVDEKGEIVHGDKLLGVLAVYLKEKGALKSQAIVATVMSNLALEEYLK 297
Query: 299 GLGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQY 358
G+ LKR VGD+Y++E MK NG N GGEQSGHII SDY TGDGLV+ALQV + +
Sbjct: 298 KHGIELKRCNVGDKYVLECMKENGINFGGEQSGHIIFSDYAKTGDGLVSALQVSALMLES 357
Query: 359 DKPVSTICHCFEEYPQFLRSVSVKDTSILNSSSIVQAIADAESELRGIDRLIVRASGTES 418
K S + FE YPQ L ++ V++ L ++ + E E GI R ++R SGTE+
Sbjct: 358 KKKASEALNPFELYPQLLVNLKVQEKKPLEKIKGLKELLK-ELEKLGI-RHLIRYSGTEN 415
Query: 419 LIRIMAEGDDLSRIKRIVDDLAK 441
+RI+ EG D +++ + +L +
Sbjct: 416 KLRILLEGKDEKLLEKKMQELVE 438
>gnl|CDD|184618 PRK14318, glmM, phosphoglucosamine mutase; Provisional.
Length = 448
Score = 436 bits (1124), Expect = e-123
Identities = 185/445 (41%), Positives = 267/445 (60%), Gaps = 9/445 (2%)
Query: 4 RFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLF----RGKKKHRRVVIGKDTRLSGYMLE 59
R FGTDG+RG +N +T + +G A + R + V+G+D R SG LE
Sbjct: 3 RLFGTDGVRGLANR-DLTAELALALGAAAARVLGHAGRPGGRRPVAVVGRDPRASGEFLE 61
Query: 60 NSLVAGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGY 119
++ AG +AG+D +G +P+PAVA LT +L AD GVMISASHNP DNGIK F G+
Sbjct: 62 AAVSAGLASAGVDVLRVGVLPTPAVAYLTAALDADFGVMISASHNPMPDNGIKFFAAGGH 121
Query: 120 KVSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRI 179
K+ D+EDRIE +L L +G DRY+ H+ LP L GL++
Sbjct: 122 KLPDDVEDRIEAVL-GQLPWLRPTGAGVGRVIDAPDATDRYLRHLLGALPTR--LDGLKV 178
Query: 180 VVDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIG 239
VVDCA+GA+ VAPE + GADV+ I P+G+NIN CGST++ LQ V AD+G
Sbjct: 179 VVDCAHGAASGVAPEAYRAAGADVIAINADPDGLNINDGCGSTHLEQLQAAVVAHGADLG 238
Query: 240 IALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAG 299
+A DGD DR + VD G +V+GDQIMA++A L + +V TVMSN+GL+ +
Sbjct: 239 LAHDGDADRCLAVDANGNVVDGDQIMAILALAMKEAGELASDTLVATVMSNLGLKLAMRE 298
Query: 300 LGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYD 359
G+++ T VGDRY++E M+ G+++GGEQSGHI++ D+ +TGDG++ L+++ + Q
Sbjct: 299 AGITVVTTAVGDRYVLEEMRAGGYSLGGEQSGHIVMPDHATTGDGILTGLRLMARMAQTG 358
Query: 360 KPVSTICHCFEEYPQFLRSVSVKD-TSILNSSSIVQAIADAESELRGIDRLIVRASGTES 418
K ++ + PQ L +V V D T+ + S+ A+A AE+EL R+++R SGTE
Sbjct: 359 KSLAELASAMTVLPQVLINVPVVDKTTAATAPSVRAAVARAEAELGDTGRVLLRPSGTEP 418
Query: 419 LIRIMAEGDDLSRIKRIVDDLAKVI 443
L+R+M E D +R+ LA V+
Sbjct: 419 LVRVMVEAADEETARRVAGRLADVV 443
>gnl|CDD|184620 PRK14323, glmM, phosphoglucosamine mutase; Provisional.
Length = 440
Score = 409 bits (1053), Expect = e-115
Identities = 185/445 (41%), Positives = 262/445 (58%), Gaps = 12/445 (2%)
Query: 1 MKRRFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLEN 60
M+RR+FGTDG+RG + P+TP F++++G A G +F+ V++GKDTR SG MLE
Sbjct: 1 MERRYFGTDGVRGVAGEPPLTPEFVLKLGQAAGEVFKRHGPRPVVLLGKDTRQSGDMLEA 60
Query: 61 SLVAGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYK 120
+L AG T+ G+ LG +P+P V+ LTR L A GV+ISASHNPYQDNGIK FG DG K
Sbjct: 61 ALAAGLTSRGVRVEHLGVLPTPGVSYLTRHLGATAGVVISASHNPYQDNGIKFFGADGEK 120
Query: 121 VSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRIV 180
+ E IE LL++ IG Y++ + P L GL++
Sbjct: 121 LPDAAELEIEALLDEVPELAEVTGAGIGSVSDFTEAERLYLDFLLSHAPD---LSGLKVA 177
Query: 181 VDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIGI 240
+DCANGA+Y++AP+VF GADV + + P+G NIN CGST+ +LQR V E D+G+
Sbjct: 178 LDCANGAAYRLAPKVFQAAGADVFALFNTPDGRNINRGCGSTHPEALQRFVVEGGLDLGV 237
Query: 241 ALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGN-GIVTTVMSNIGLERFIAG 299
A DGD DR + VD +G + +GD ++ L A RG +V TVMSN+ LE +
Sbjct: 238 AFDGDADRALFVDRRGRLFHGDHMLYLNAL-------ARGEKAVVGTVMSNMALEVKLRE 290
Query: 300 LGLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYD 359
G++ RT VGDRY+ E + G +GGEQSGH++ D+ TGDG++ AL L +K
Sbjct: 291 AGIAFHRTAVGDRYVHEKLHAKGLTLGGEQSGHVLFLDHAPTGDGVLTALLTLAAMKALG 350
Query: 360 KPVSTICHCFEEYPQFLRSVSVKD-TSILNSSSIVQAIADAESELRGIDRLIVRASGTES 418
+ YPQ L +V V D + + +A+ +AE+ L G R+ +R SGTE
Sbjct: 351 TDLDAWYDALPMYPQTLLNVRVSDKAKVAADPRVQEAVREAEARLGGRGRVNLRPSGTEP 410
Query: 419 LIRIMAEGDDLSRIKRIVDDLAKVI 443
L+R+M EG D + I+ + +LA V+
Sbjct: 411 LVRVMVEGPDEAEIEEVARELAGVV 435
>gnl|CDD|184617 PRK14317, glmM, phosphoglucosamine mutase; Provisional.
Length = 465
Score = 395 bits (1016), Expect = e-110
Identities = 187/444 (42%), Positives = 263/444 (59%), Gaps = 8/444 (1%)
Query: 5 FFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRR-VVIGKDTRLSGYMLENSLV 63
FGTDGIRGK +T +++G G + R V+IG+D+R S ML +L
Sbjct: 18 LFGTDGIRGKVGEL-LTAPLALQVGFWAGQVLRQTAPGEGPVLIGQDSRNSSDMLAMALA 76
Query: 64 AGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVST 123
AG TAAG + + LG P+PAVA LTR A G+MISASHNP +DNGIK FG DG K+S
Sbjct: 77 AGLTAAGREVWHLGLCPTPAVAYLTRKSEAIGGLMISASHNPPEDNGIKFFGADGTKLSP 136
Query: 124 DIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRIVVDC 183
+++ +IE L +L+S + + H R + + D Y + + +LP V LQG++IV+D
Sbjct: 137 ELQAQIEAGLRGELSSSDNASNWGRHYHRPELL-DDYRDALLESLPDRVNLQGVKIVLDL 195
Query: 184 ANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIGIALD 243
A GA+ APEVF LGA+V+ + D+P+G IN++CGST++ LQ V E AD+G A D
Sbjct: 196 AWGAAVACAPEVFKALGAEVICLHDQPDGDRINVNCGSTHLEPLQAAVLEHGADMGFAFD 255
Query: 244 GDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLS 303
GD DRV+ VD +G +V+GD I+ L + L N +V TVMSN+G ER G
Sbjct: 256 GDADRVLAVDGQGRVVDGDHILYLWGSHLQEQNQLPDNLLVATVMSNLGFERAWQQRGGQ 315
Query: 304 LKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKPVS 363
L+RT VGD+++ M G +GGEQSGHI+ +G +GDGL+ AL + + Q ++
Sbjct: 316 LERTAVGDQHVHAAMLETGAMLGGEQSGHILCHHHGLSGDGLLTALHLATLVHQSGVSLA 375
Query: 364 T-ICHCFEEYPQFLRSVSVKDTSIL----NSSSIVQAIADAESELRGIDRLIVRASGTES 418
+ F+ YPQ LR+V V+D + QAIA AE+ + R++VRASGTE
Sbjct: 376 ELVDQSFQTYPQKLRNVRVEDRDRRLNWQECEPLQQAIAQAEAAMGDTGRVLVRASGTEP 435
Query: 419 LIRIMAEGDDLSRIKRIVDDLAKV 442
LIR+M E +D + + L V
Sbjct: 436 LIRVMVEAEDAELVNHWTNHLVAV 459
>gnl|CDD|172795 PRK14319, glmM, phosphoglucosamine mutase; Provisional.
Length = 430
Score = 335 bits (861), Expect = 1e-92
Identities = 177/447 (39%), Positives = 267/447 (59%), Gaps = 25/447 (5%)
Query: 4 RFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLV 63
R FGTDGIRG N F +TP R+G A+G + K + I KDTR SG MLE +LV
Sbjct: 2 RLFGTDGIRGVVNEF-LTPEIAFRLGNALGNMVDKK-----IFIAKDTRASGDMLEAALV 55
Query: 64 AGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVST 123
AG T+AG D + G +P+PA+A++T+ L GVMISASHNP + NG+K+ GYK+
Sbjct: 56 AGITSAGADVYRCGVLPTPALALITK-LEDAAGVMISASHNPPEYNGLKVLM-RGYKLPD 113
Query: 124 DIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRIVVDC 183
++E+RIE + + + S Y+ +G + Y ++K+ + L G++IVVD
Sbjct: 114 EVEERIEKEMNE---IHYSPYNEVGCVIDYKLAFEEYFNYIKQ-QYEGLDLSGIKIVVDV 169
Query: 184 ANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIGIALD 243
ANGA+Y++ P + GA V V+ + P+G NIN+DCGST+ + + K+ I I D
Sbjct: 170 ANGATYELNPYILEYFGAKVEVVNNTPDGFNINVDCGSTHPENAKEKI--TNHKIAILHD 227
Query: 244 GDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLS 303
GDGDR I +DEKG +GD+I+ L A+ L+ + +V T++SN+GLE F+ G+
Sbjct: 228 GDGDRCIFLDEKGQEFHGDKIIGLTAKHLKKEGRLKNDVVVGTILSNMGLEVFLKNNGIK 287
Query: 304 LKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKPVS 363
+ RT+VGDRY++E M +GGE+SGHII D +TGDGL+ AL+ L + + K +S
Sbjct: 288 VVRTKVGDRYVLEEMLKLNATLGGERSGHIIYLDKSTTGDGLITALETLSVMVKSGKKLS 347
Query: 364 TICHCFEEYPQFLRSVSVKDTSILNSS---SIVQAIADAESELRGIDRLIVRASGTESLI 420
+ + +YPQ + +V VK+ + ++++I D R+IVR SGTE ++
Sbjct: 348 DLSNEIPDYPQVMINVKVKNKEVYKHKEVFKLIKSIKDY--------RVIVRPSGTEPVV 399
Query: 421 RIMAEGDDLSRIKRIVDDLAKVIPMID 447
R++ EG D I I +D+A +I +D
Sbjct: 400 RVLVEGPDEEYITNIANDIAGLIKELD 426
>gnl|CDD|172796 PRK14320, glmM, phosphoglucosamine mutase; Provisional.
Length = 443
Score = 299 bits (768), Expect = 7e-82
Identities = 168/430 (39%), Positives = 255/430 (59%), Gaps = 10/430 (2%)
Query: 4 RFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLV 63
++FGTDGIRG+ IT F ++G AVG L K + V++G+DTR SG L+ +LV
Sbjct: 3 KYFGTDGIRGEVANSTITVEFTQKLGNAVGSLINQKNYPKFVIVGQDTRSSGGFLKFALV 62
Query: 64 AGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVST 123
+G AAG+D LG +P+P VA +T RA G +I+ASHN + DNGIKLF +G+K+
Sbjct: 63 SGLNAAGIDVLDLGVVPTPVVAFMTVKHRAAAGFVITASHNKFTDNGIKLFSSNGFKLDD 122
Query: 124 DIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRIVVDC 183
+E+ +E +++ D G K + D YIE + + V +G ++VVDC
Sbjct: 123 ALEEEVEDMIDGDFIYQPQF--KFGSYKILANAIDEYIESIHSRFAKFVNYKG-KVVVDC 179
Query: 184 ANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIGIALD 243
A+GA+ + + G + V I P+G+NIN+ CG+T V ++++ V E +AD+GI+LD
Sbjct: 180 AHGAASHNFEALLDKFGINYVSIASNPDGLNINVGCGATCVSNIKKAVKEQKADLGISLD 239
Query: 244 GDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRG--NGIVTTVMSNIGLERFIAGLG 301
GD DR+IIVDE G ++GD I+ ++A+ +S + G NGIV T M+N+ E
Sbjct: 240 GDADRIIIVDENGQEIDGDGILNILAQ----YSDICGGTNGIVGTQMTNMSYENHYRANK 295
Query: 302 LSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKP 361
+ R++VGDRY++E + G+ +GGE SGH+I ++G+TGDGL A+Q+L Q DKP
Sbjct: 296 IPFIRSKVGDRYVLEDLVKYGYKIGGESSGHVINLNFGTTGDGLFTAIQLLAIFSQADKP 355
Query: 362 VSTICHCFEEYPQFLRSVSV-KDTSILNSSSIVQAIADAESELRGIDRLIVRASGTESLI 420
VS E Q L +V + K + + + + D E L R+++R SGTE ++
Sbjct: 356 VSEFKLQGELMQQTLINVPLTKKVAREDLQKVASDVNDVEKRLGNRGRVLLRPSGTEPVL 415
Query: 421 RIMAEGDDLS 430
R+M E DD S
Sbjct: 416 RVMVEADDKS 425
>gnl|CDD|184619 PRK14322, glmM, phosphoglucosamine mutase; Provisional.
Length = 429
Score = 295 bits (756), Expect = 2e-80
Identities = 176/443 (39%), Positives = 267/443 (60%), Gaps = 16/443 (3%)
Query: 1 MKRRFFGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLEN 60
M+ ++FGTDGIRG +T ++G A+G + G+ K V++GKDTR+SG LE
Sbjct: 1 MRVKYFGTDGIRGVFGE-TLTDELAFKVGKALGEIV-GEGK---VIVGKDTRVSGDSLEA 55
Query: 61 SLVAGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYK 120
++ AG T+ G+D + G +P+PAVA+LTR R+ GV+ISASHNP + NGIK+ GYK
Sbjct: 56 AISAGLTSMGVDVLLCGILPTPAVALLTRITRS-FGVVISASHNPPEYNGIKVL-KGGYK 113
Query: 121 VSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRIV 180
+ ++E IE +E + Y +G K D YI V RD+ L G +
Sbjct: 114 IPDEMEVEIEERIE---SGYFPVRSVVGRTKSFREGRDMYIGAVLEMF-RDLDLTGEMVS 169
Query: 181 VDCANGASYKVAPEVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIGI 240
+D ANGA+ A EVF LGA V V D +G+ IN CG+T+ L ++ +G
Sbjct: 170 LDLANGATTTTAKEVFEFLGAKVEVFNDSQDGLLINQGCGATHPRFLAEEMK--NGKVGF 227
Query: 241 ALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGL 300
DGDGDRVI VDE+ +VNGD+I+ ++A L + +V TVM+N GLE F+
Sbjct: 228 TFDGDGDRVIAVDEERNVVNGDRIIGILAVGLKEEGRLNSDTVVGTVMTNGGLEDFLKER 287
Query: 301 GLSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDK 360
G+ L RT+VGD+Y++E M +G N+GGE+SGHII+ D +TGDGL+ AL+++R +K+ +
Sbjct: 288 GIKLLRTKVGDKYVLEKMLESGANLGGERSGHIIILDRSTTGDGLITALELMRVLKRSGR 347
Query: 361 PVSTICHCFEEYPQFLRSVSVKDTSILNSSSIVQAIADAESELRGIDRLIVRASGTESLI 420
+S +YPQ ++V + L + ++ + + ES RG R+++R SGTE ++
Sbjct: 348 NLSDFAKEIPDYPQITKNVRRTERMSLENENLRKIV--EESTSRGY-RVVIRPSGTEPVV 404
Query: 421 RIMAEGDDLSRIKRIVDDLAKVI 443
RI EG D I++IV+++++V+
Sbjct: 405 RITVEGKDREEIEKIVEEISRVL 427
>gnl|CDD|172797 PRK14321, glmM, phosphoglucosamine mutase; Provisional.
Length = 449
Score = 204 bits (520), Expect = 4e-53
Identities = 137/454 (30%), Positives = 231/454 (50%), Gaps = 28/454 (6%)
Query: 4 RFFGTDGIRGKSNTFPITPNFMMRIGIAVG-YLFRGKKKHRRVVIGKDTRLSGYMLENSL 62
++FGT GIR N +TP +++G+A+G YL G +VV+GKDTR S ML+N+L
Sbjct: 3 KYFGTSGIREVVNE-KLTPELALKVGLALGTYLGGG-----KVVVGKDTRTSSEMLKNAL 56
Query: 63 VAGFTAAGMDAFILGPIPSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVS 122
++G + G+D +G P+P + AD GV I+ASHNP + NGIK++ +G +
Sbjct: 57 ISGLLSTGVDVIDIGLAPTPLTGFAIKLYNADAGVTITASHNPPEYNGIKVWQRNGMAYT 116
Query: 123 TDIEDRIETLLEDDLTSYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQGLRIVVD 182
++E+ +E ++E + ++ IG +R D + YI+ + + +VVD
Sbjct: 117 PEMENELERIIESGNFKRVP-WNEIGTLRRADP-KEEYIKAALEMIKLE---NSYTVVVD 171
Query: 183 CANGASYKVAPEVFWELGADVVVIGDKPNGINI-NLDCGSTNVLSLQRKVHEVRADIGIA 241
NGA ++P + ELG V+ + P+G + L+ + ++ L + V ++AD+GIA
Sbjct: 172 SGNGAGSILSPYLQRELGNKVISLNSHPSGFFVRELEPNAKSLSMLAKTVKVLKADVGIA 231
Query: 242 LDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLG 301
DGD DR+ +VD++G V + +++LIA +M +G IVTTV + L+ +I LG
Sbjct: 232 HDGDADRIGVVDDQGNFVEYEVMLSLIA-GYMLRKFGKGK-IVTTVDAGFALDDYIRPLG 289
Query: 302 LSLKRTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKP 361
+ RT VGD + E + +G GGE SG I+ + T DG+ A VL I + P
Sbjct: 290 GEVIRTRVGDVAVAEELAKHGGVFGGEPSGTWIIPQWNLTPDGIFAGALVLEMIDRLG-P 348
Query: 362 VSTICHCFEEYPQFLRSVSVKDTSILNSSSIVQAIADAESELRG---IDR---------L 409
+S + Y + + + I+ A + ID +
Sbjct: 349 ISELAKEVPRYVTLRAKIPCPNEKKAKAMEIIAKEALKNFDYERLIDIDGIRIENDDWWI 408
Query: 410 IVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVI 443
+ R SGTE ++RI E + + +++ K++
Sbjct: 409 LFRPSGTEPIMRITLEAHTEEKAEELMEKAEKLV 442
>gnl|CDD|181937 PRK09542, manB, phosphomannomutase/phosphoglucomutase; Reviewed.
Length = 445
Score = 151 bits (383), Expect = 3e-37
Identities = 129/448 (28%), Positives = 191/448 (42%), Gaps = 43/448 (9%)
Query: 20 ITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPI 79
I + + +G A L R + VVIG D R S L + G TA G+D +G
Sbjct: 14 IDEDLVRDVGAAFARLMRAEGA-TTVVIGHDMRDSSPELAAAFAEGVTAQGLDVVRIGLA 72
Query: 80 PSPAVAMLTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIE-DRIETLLEDDLT 138
+ + + L G M +ASHNP NGIKL V D I L +
Sbjct: 73 STDQLYFASGLLDCP-GAMFTASHNPAAYNGIKLCRAGAKPVGQDTGLAAIRDDLIAGVP 131
Query: 139 SYLSCYDSIGHAKRVDGVHDRYIEHVKRTLPRDVTLQG---LRIVVDCANGASYKVAPEV 195
+Y ++ V Y + R+L V L G L++ VD NG P V
Sbjct: 132 AYDGPPGTVTERD----VLADYAAFL-RSL---VDLSGIRPLKVAVDAGNGMGGHTVPAV 183
Query: 196 FWELGADVVVI-----GDKPNGININLDCGSTNVLSLQRKVHEVRADIGIALDGDGDRVI 250
L ++ + G PN LD N++ LQ V E ADIG+A DGD DR
Sbjct: 184 LGGLPITLLPLYFELDGTFPNHEANPLD--PANLVDLQAFVRETGADIGLAFDGDADRCF 241
Query: 251 IVDEKGAIVNGDQIMALIA-REWMSHSLLRGNGIVTTVMSNI----GLERFIAGLGLSLK 305
+VDE+G V+ + AL+A RE L R G T++ N+ + +A G +
Sbjct: 242 VVDERGQPVSPSAVTALVAARE-----LAREPGA--TIIHNLITSRAVPELVAERGGTPV 294
Query: 306 RTEVGDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQVLRYIKQYDKPVSTI 365
RT VG +I M G GGE S H D+ G++AAL VL + + D+P+S +
Sbjct: 295 RTRVGHSFIKALMAETGAIFGGEHSAHYYFRDFWGADSGMLAALHVLAALGEQDRPLSEL 354
Query: 366 CHCFEEYPQFLRSVSVKDTSILNSSSIVQAIADAESELRGIDRLIV----------RASG 415
++ Y S + ++++A AD + +D + V RAS
Sbjct: 355 MADYQRYAASGEINSTVADAPARMEAVLKAFADRIVSVDHLDGVTVDLGDGSWFNLRASN 414
Query: 416 TESLIRIMAEGDDLSRIKRIVDDLAKVI 443
TE L+R+ E + +VD++ +I
Sbjct: 415 TEPLLRLNVEARTEEEVDALVDEVLAII 442
>gnl|CDD|177999 PLN02371, PLN02371, phosphoglucosamine mutase family protein.
Length = 583
Score = 124 bits (313), Expect = 5e-29
Identities = 105/335 (31%), Positives = 148/335 (44%), Gaps = 45/335 (13%)
Query: 8 TDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHR-----RVVIGKDTRLSGYMLENSL 62
+G+ G+ +TP + IG A KKK RV +G+D R+SG L +++
Sbjct: 78 VEGVEGE--PVTLTPPAVEAIGAAFAEWLLEKKKADGSGELRVSVGRDPRISGPRLADAV 135
Query: 63 VAGFTAAGMDAFILGPIPSPAVAMLTRSLR--ADVGVMISASHNPYQDNGIKLFGPDGYK 120
AG +AG+D +G +PA+ M T + R D +MI+ASH PY NG+K F DG
Sbjct: 136 FAGLASAGLDVVDMGLATTPAMFMSTLTEREDYDAPIMITASHLPYNRNGLKFFTKDGGL 195
Query: 121 VSTDIEDRIETLLEDDLTSYLSCYDSIGHA---------KRVD-------GVHDRYIEHV 164
DI+D +LE Y D RVD + D E V
Sbjct: 196 GKPDIKD----ILERAARIYKEWSDEGLLKSSSGASSVVCRVDFMSTYAKHLRDAIKEGV 251
Query: 165 KRTLPRDVTLQGLRIVVDCANGASYKVAPEVFWELGADVVVI------GDKPNGININLD 218
+ L+G +IVVD NGA A +V LGAD G PN I D
Sbjct: 252 GHPTNYETPLEGFKIVVDAGNGAGGFFAEKVLEPLGADTSGSLFLEPDGMFPNHIPNPED 311
Query: 219 CGSTNVLSLQRKVHEVRADIGIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWMSHSLL 278
+ + + V +AD+GI D D DR +VD G +N ++++AL MS +L
Sbjct: 312 --KAAMSATTQAVLANKADLGIIFDTDVDRSAVVDSSGREINRNRLIAL-----MSAIVL 364
Query: 279 R---GNGIVTTVMSNIGLERFIAGLGLSLKRTEVG 310
G IVT +++ GL FI G R + G
Sbjct: 365 EEHPGTTIVTDSVTSDGLTTFIEKKGGKHHRFKRG 399
>gnl|CDD|185312 PRK15414, PRK15414, phosphomannomutase CpsG; Provisional.
Length = 456
Score = 99.2 bits (247), Expect = 2e-21
Identities = 96/342 (28%), Positives = 151/342 (44%), Gaps = 34/342 (9%)
Query: 27 RIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPIPSPAVAM 86
RIG A G + K +V+G D RL+ L+ +L G AG+D +G + +
Sbjct: 27 RIGRAYGEFLKPKT----IVLGGDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYF 82
Query: 87 LTRSLRADVGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDR-IETLLEDDLTSYLSCYD 145
T L D G+ ++ASHNP NG+KL +S D R ++ L E + +
Sbjct: 83 ATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDVQRLAE------ANDFP 136
Query: 146 SIGHAKRVD----GVHDRYIEHVKRTLPRDVTLQGLRIVVDCANGASYKVAPEV---FWE 198
+ KR + D Y++H+ + L L++V++ NGA+ V + F
Sbjct: 137 PVDETKRGRYQQINLRDAYVDHLFGYINVK-NLTPLKLVINSGNGAAGPVVDAIEARFKA 195
Query: 199 LGADVVVI-------GDKPNGININL--DCGSTNVLSLQRKVHEVRADIGIALDGDGDRV 249
LGA V +I G+ PNGI L +C + V + AD+GIA DGD DR
Sbjct: 196 LGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDT----RNAVIKHGADMGIAFDGDFDRC 251
Query: 250 IIVDEKGAIVNGDQIMALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLKRTEV 309
+ DEKG + G I+ L+A ++ + G I+ + + G + ++
Sbjct: 252 FLFDEKGQFIEGYYIVGLLAEAFLEKN--PGAKIIHDPRLSWNTVDVVTAAGGTPVMSKT 309
Query: 310 GDRYIMEYMKNNGFNVGGEQSGHIILSDYGSTGDGLVAALQV 351
G +I E M+ GGE S H D+ G++ L V
Sbjct: 310 GHAFIKERMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLV 351
>gnl|CDD|130202 TIGR01132, pgm, phosphoglucomutase, alpha-D-glucose
phosphate-specific. This enzyme interconverts
alpha-D-glucose-1-P and alpha-D-glucose-6-P.
Length = 543
Score = 79.9 bits (197), Expect = 1e-15
Identities = 87/359 (24%), Positives = 151/359 (42%), Gaps = 42/359 (11%)
Query: 6 FGTDGIRGKSNTFPITPNFMMRIGIAVGYLFRGKKKHRRVVIGKDTRLSGYMLENSLVAG 65
FGT G RG + ++ I A+ + + IGKDT S++
Sbjct: 41 FGTSGHRGSALRGTFNEPHILAIAQAIAEYRAAQGITGPLYIGKDTHALSEPAFISVLEV 100
Query: 66 FTAAGMDAFIL---GPIPSPAV--AMLTRSLR----ADVGVMISASHNPYQDNGIKLFGP 116
A G++ + G P+PAV A+LT + + AD G++I+ SHNP +D GIK P
Sbjct: 101 LAANGVEVIVQENNGFTPTPAVSHAILTHNKKGEPLAD-GIVITPSHNPPEDGGIKYNPP 159
Query: 117 DG----YKVSTDIEDRIETLLEDDLTSY----LSCYDSIGHAKRVDGVHDRYIEHVKRTL 168
+G + + IEDR LL + L L+ + G K D ++ L
Sbjct: 160 NGGPADTEATQAIEDRANALLANGLKGVKRLPLAQALASGTVKAHD-----LVQPYVDGL 214
Query: 169 PRDVTLQ-----GLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGI---------- 213
V + GLR+ VD G+ + + ++ ++ + +
Sbjct: 215 ADIVDMAAIQKAGLRLGVDPLGGSGIDYWKRIAEKYNLNLTLVNPQVDPTFRFMTLDKDG 274
Query: 214 NINLDCGSTNVLSLQRKVHEVRADIGIALDGDGDRVIIVDEKGAIVNGDQIMALIAREWM 273
I +DC S ++ + + + D+ D D DR IV G ++N + +A+
Sbjct: 275 KIRMDCSSPYAMAGLLALRD-KYDLAFGNDPDYDRHGIVTPAG-LMNPNHYLAVAINYLF 332
Query: 274 SHSLLRGNGIVT--TVMSNIGLERFIAGLGLSLKRTEVGDRYIMEYMKNNGFNVGGEQS 330
H G + T++S+ ++R +A LG L VG ++ ++ + + F GGE+S
Sbjct: 333 QHRPQWGGDVAVGKTLVSSAMIDRVVADLGRQLVEVPVGFKWFVDGLFDGSFGFGGEES 391
>gnl|CDD|181032 PRK07564, PRK07564, phosphoglucomutase; Validated.
Length = 543
Score = 78.3 bits (194), Expect = 3e-15
Identities = 111/398 (27%), Positives = 162/398 (40%), Gaps = 77/398 (19%)
Query: 6 FGTDGIRGKS--NTFPITPNFMMRIGIAVGYLFRGKKKHRRV-VIGKDTR-LSGYMLENS 61
FGT G RG S +F N ++ I A+ +RGK+ +G DT LS ++++
Sbjct: 40 FGTSGHRGSSLQPSF--NENHILAIFQAIC-EYRGKQGITGPLFVGGDTHALSEPAIQSA 96
Query: 62 L-VAGFTAAGMDAFIL---GPIPSPAV--AMLTRSLRADV---GVMISASHNPYQDNGIK 112
L V A G+ I+ G P+PAV A+L + R G++I+ SHNP +D GIK
Sbjct: 97 LEVL--AANGVGVVIVGRGGYTPTPAVSHAILKYNGRGGGLADGIVITPSHNPPEDGGIK 154
Query: 113 LFGPDG----YKVSTDIEDRIETLLEDDLTSYLSC-YDSIGHAKRVDGVHDRYIEHVKRT 167
P+G V+ IE R LL L D + V+ V D +
Sbjct: 155 YNPPNGGPADTDVTDAIEARANELLAYGLKGVKRIPLDRALASMTVE-VID-PVADYVED 212
Query: 168 LPRDVTLQ-----GLRIVVDCANGASYKVAPEVFWELGADVVVIGDKP----NGIN---- 214
L GLR+ VD GA+ + G D+ V+ N +
Sbjct: 213 LENVFDFDAIRKAGLRLGVDPLGGATGPYWKAIAERYGLDLTVVNAPVDPTFNFMPLDDD 272
Query: 215 --INLDCGSTNVLS--LQRKVHEVRADIGIALDGDGDRVIIVDEKGAIVNGDQIMALIAR 270
I +DC S ++ L K D+ A D DGDR IV G ++N
Sbjct: 273 GKIRMDCSSPYAMAGLLALK---DAFDLAFANDPDGDRHGIV-TPGGLMNP--------- 319
Query: 271 EWMSHSL---------LR-----GNGIVTTVMSNIGLERFIAGLGLSLKRTEVGDRYIME 316
+H L R G G+ T++S+ ++R A LG L VG ++ +
Sbjct: 320 ---NHYLAVAIAYLFHHRPGWRAGAGVGKTLVSSAMIDRVAAKLGRKLYEVPVGFKWFVN 376
Query: 317 YMKNNGFNVGGEQS-GHIILSDYGST----GDGLVAAL 349
+ + GGE+S G L GS DGL+A L
Sbjct: 377 GLDDGSLGFGGEESAGASFLRRDGSVWTTDKDGLIAVL 414
>gnl|CDD|185482 PTZ00150, PTZ00150, phosphoglucomutase-2-like protein; Provisional.
Length = 584
Score = 71.3 bits (175), Expect = 5e-13
Identities = 76/345 (22%), Positives = 124/345 (35%), Gaps = 75/345 (21%)
Query: 1 MKRRF-----FGTDGIRGKSNTFPITPNFMMRIGIA-----------------VGYLFRG 38
+KRRF FGT G+RGK M G V F
Sbjct: 37 LKRRFLKRMEFGTAGLRGK-----------MGAGFNCMNDLTVQQTAQGLCAYVIETFGQ 85
Query: 39 KKKHRRVVIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPI-PSPAVAMLTRSLRADVGV 97
K R VVIG D R + F + G ++ G P+P V R L+ GV
Sbjct: 86 ALKSRGVVIGYDGRYHSRRFAEITASVFLSKGFKVYLFGQTVPTPFVPYAVRKLKCLAGV 145
Query: 98 MISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLLEDDLTSYLSCYDSIGHAKRVD--- 154
M++ASHNP +DNG K++ +G ++ + I + +L + S ++ + D
Sbjct: 146 MVTASHNPKEDNGYKVYWSNGAQIIPPHDKNISAKILSNLEPWSSSWEYLTETLVEDPLA 205
Query: 155 GVHDRYIEHVKRTL-PRDVTLQGLRIVVDCANGASYKVAPEVFWELGADVVVIGDKPNGI 213
V D Y +K P ++IV +G + + +G PN +
Sbjct: 206 EVSDAYFATLKSEYNPACCDRSKVKIVYTAMHGVGTRFVQKALHTVGL--------PNLL 257
Query: 214 NINLDC------------------GSTNVLSLQRKVHEVRADIGIALDGDGDRVIIV--- 252
++ G+ LS++ + + +A D D DR+ +
Sbjct: 258 SVAQQAEPDPEFPTVTFPNPEEGKGALK-LSME-TAEAHGSTVVLANDPDADRLAVAEKL 315
Query: 253 DEKGAIVNGDQIMALIA------REWMSHSLLRGNGIVTTVMSNI 291
+ I G+++ AL+A + I T V S +
Sbjct: 316 NNGWKIFTGNELGALLAWWAMKRYRRQGIDKSKCFFICTVVSSRM 360
>gnl|CDD|185546 PTZ00302, PTZ00302, N-acetylglucosamine-phosphate mutase;
Provisional.
Length = 585
Score = 56.2 bits (136), Expect = 2e-08
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 95 VGVMISASHNPYQDNGIKLFGPDGYKVSTDIEDRIETLL----EDDLTSYLSCY 144
VGVMI+ASHNP QDNG+K+ PDG + E +DL S L
Sbjct: 77 VGVMITASHNPIQDNGVKIIDPDGGMLEESWEKICTDFANARTGEDLVSVLMDC 130
Score = 51.6 bits (124), Expect = 4e-07
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 22/135 (16%)
Query: 178 RIVVDCANG-ASYKVAP--EVFWELGADVVVIGDKPNGINI-NLDCGSTNVLSLQRKVHE 233
+VVDCANG YK+ E +LG +++ I + + N CG+ V ++
Sbjct: 247 ILVVDCANGVGGYKIKRFFEALKQLGIEIIPININCDEEELLNDKCGADYVQKTRKPPRA 306
Query: 234 VRADIGI------ALDGDGDRVI--IVDEKGA----IVNGDQIMALIA---REWMSHSLL 278
++ G + DGD DR++ D+ G +++GD+I L A ++ + L
Sbjct: 307 MKEWPGDEETRVASFDGDADRLVYFFPDKDGDDKWVLLDGDRIAILYAMLIKKLLGKIQL 366
Query: 279 RGN---GIVTTVMSN 290
+ G+V T +N
Sbjct: 367 KKKLDIGVVQTAYAN 381
Score = 38.5 bits (90), Expect = 0.004
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 408 RLIVRASGTESLIRIMAEGDDLSRIKRIVDDLAKVI 443
R +R SGTE ++R+ AE L + + +++ ++
Sbjct: 543 RAFIRPSGTEPVVRVYAEAPTLEQADELANEVKGLV 578
>gnl|CDD|178483 PLN02895, PLN02895, phosphoacetylglucosamine mutase.
Length = 562
Score = 48.5 bits (116), Expect = 3e-06
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 64 AGFTAAGMDAFILGPI--PSPAVAMLTRSLR--ADVGVMISASHNPYQDNGIKLFGPDG 118
AGF DA +L +A L RSL+ A G+MI+ASHNP DNG+K+ P G
Sbjct: 29 AGFRT---DASLLESTVFRVGILAAL-RSLKTGAATGLMITASHNPVSDNGVKIVDPSG 83
Score = 38.5 bits (90), Expect = 0.004
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 178 RIVVDCANGASY-KVAP--EVFWELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEV 234
++VVD ANG K+ + L +V G + G+ +N G+ V +
Sbjct: 214 KLVVDGANGVGAEKLETLKKALGGLDLEVRNSGKEGEGV-LNEGVGADFVQKEKVPPTGF 272
Query: 235 RA-DIGI---ALDGDGDRVIIVDEKGA-----IVNGDQIMALIAR 270
+ D+G+ +LDGD DR++ A +++GD+I +L A
Sbjct: 273 ASKDVGLRCASLDGDADRLVYFYVSSAGSKIDLLDGDKIASLFAL 317
Score = 32.7 bits (75), Expect = 0.22
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 393 VQAIADAESELRGIDRLIVRASGTESLIRIMAEG------DDLSR-IKRIVDDLA 440
+Q DAE R VR SGTE ++R+ AE D L+R + R+V DL
Sbjct: 501 LQDAIDAEVAKYPRGRAFVRPSGTEDVVRVYAEASTQEAADSLAREVARLVYDLL 555
>gnl|CDD|177942 PLN02307, PLN02307, phosphoglucomutase.
Length = 579
Score = 31.9 bits (73), Expect = 0.33
Identities = 76/327 (23%), Positives = 121/327 (37%), Gaps = 70/327 (21%)
Query: 77 GPIPSPAVAMLTR---SLRADVGVMISASHNP---YQDNGIKLFGPDGYKVSTDIEDRI- 129
G + +PAV+ + R +A+ G +++ASHNP +D GIK G I D+I
Sbjct: 99 GLLSTPAVSAVIRERDGSKANGGFILTASHNPGGPEEDFGIKYNYESGQPAPESITDKIY 158
Query: 130 -ETLLEDDLTSYLSCYD-------SIGHAKR----------VDGVHDRYIEHVKRTLPRD 171
TL + Y D ++G K +D V D Y++ +K +
Sbjct: 159 GNTL---TIKEYKMAEDIPDVDLSAVGVTKFGGPEDFDVEVIDPVED-YVKLMKSIFDFE 214
Query: 172 VTLQGL------RIVVDCANGASYKVAPEVFW-ELGADVVVIGDKPNGI----------- 213
+ ++ L D +G + A +F ELGA + N +
Sbjct: 215 L-IKKLLSRPDFTFCFDAMHGVTGAYAKRIFVEELGAPESSL---LNCVPKEDFGGGHPD 270
Query: 214 -NINLDCGSTNVLSLQRKVHEVRA-DIGIALDGDGDRVIIVDEKGAIVNGDQIMALIARE 271
N+ + L + + + G A DGDGDR +I+ K V +A+IA
Sbjct: 271 PNLTYAKELVKRMGLGKTSYGDEPPEFGAASDGDGDRNMILG-KRFFVTPSDSVAIIAAN 329
Query: 272 WMS-----HSLLRGNGIVTTVMSNIG-LERFIAGLGLSLKRTEVGDRYIMEYMKNNGFNV 325
L+G V M L+ L L G ++ M ++
Sbjct: 330 AQEAIPYFSGGLKG---VARSMPTSAALDVVAKKLNLPFFEVPTGWKFFGNLMDAGKLSI 386
Query: 326 GGEQS---GHIILSDYGSTGDGLVAAL 349
GE+S G SD+ DG+ A L
Sbjct: 387 CGEESFGTG----SDHIREKDGIWAVL 409
>gnl|CDD|178106 PLN02488, PLN02488, probable pectinesterase/pectinesterase
inhibitor.
Length = 509
Score = 30.0 bits (67), Expect = 1.3
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 24/101 (23%)
Query: 127 DRIETLLEDDLTSYLSCYDSIG---HAKRVDGVHDRYIEHVKRTL-------PRDVTLQG 176
+ + T L LTSY++C D IG + +RV+ + I + L PRD T
Sbjct: 109 ENVHTWLSGVLTSYITCIDEIGEGAYKRRVEPELEDLISRARVALAIFISISPRDDT--E 166
Query: 177 LRIVVDCANGASY---------KVAPEVFWELGADVVVIGD 208
L+ VV NG S+ + PEV ++ ADVVV D
Sbjct: 167 LKSVV--PNGPSWLSNVDKKYLYLNPEVLKKI-ADVVVAKD 204
>gnl|CDD|179009 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor
protein; Reviewed.
Length = 782
Score = 29.0 bits (66), Expect = 2.7
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 21/69 (30%)
Query: 365 ICHCFEEYPQFLRSVS----------------VKDT--SILNSSSIVQAIADAESELRGI 406
I +C +E + S S +++ SI+ S S+ + + D +R
Sbjct: 135 IHNCIDEEGEVKDSASEKLRGIRRQLRRKKSRIREKLESIIRSKSLQKYLQDTIITIRN- 193
Query: 407 DR--LIVRA 413
DR L V+A
Sbjct: 194 DRYVLPVKA 202
>gnl|CDD|178425 PLN02831, PLN02831, Bifunctional GTP cyclohydrolase II/
3,4-dihydroxy-2-butanone-4-phosphate synthase.
Length = 450
Score = 28.5 bits (64), Expect = 3.6
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 246 GDRVIIVDEKGAIVNGDQIMA--LIAREWMSHSLLRGNGIVTTVMSNIGLER 295
G V++VD++ GD IMA L+ E M+ + G+GIV M L+R
Sbjct: 48 GKFVVVVDDEDRENEGDLIMAASLVTPEAMAFLVKHGSGIVCVSMKGEDLDR 99
>gnl|CDD|179024 PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase;
Validated.
Length = 343
Score = 28.6 bits (65), Expect = 3.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 236 ADIGIALDGDGDRVIIV 252
DIG A+D R+++V
Sbjct: 290 CDIGFAVDERTGRLVVV 306
>gnl|CDD|177505 PHA03000, PHA03000, Hypothetical protein; Provisional.
Length = 566
Score = 28.1 bits (63), Expect = 4.4
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 359 DKPVSTICH--CFEEYPQFLRSVSVKDTSILNSSSIVQAI 396
D V I H C E+ F+R + K+ SIL S+++ I
Sbjct: 479 DILVKIISHLKCVEDVTTFVRFATCKNPSIL--PSVIRTI 516
>gnl|CDD|181751 PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional.
Length = 879
Score = 28.2 bits (64), Expect = 4.4
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 416 TESLIRIMAE--GDDLSRIKRIVDDLAKVIPM 445
TE I +AE G L +K V+ L + PM
Sbjct: 632 TEEEIEELAEALGLSLEELKARVEALHEFNPM 663
>gnl|CDD|162307 TIGR01341, aconitase_1, aconitate hydratase 1. This model
represents one form of the TCA cycle enzyme aconitate
hydratase, also known as aconitase and citrate
hydro-lyase. It is found in bacteria, archaea, and
eukaryotic cytosol. It has been shown to act also as an
iron-responsive element binding protein in animals and
may have the same role in other eukaryotes.
Length = 876
Score = 28.2 bits (63), Expect = 4.7
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 265 MALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSLK----RTEVG-----DRYIM 315
+ L ++ SL G+ +VT ++ GL ++ LG +L T +G +Y+
Sbjct: 442 LGLKVPPYVKTSLAPGSKVVTDYLAESGLLPYLEELGFNLVGYGCTTCIGNSGPLPKYVE 501
Query: 316 EYMKNNGFNVGGEQSG 331
E +K N V SG
Sbjct: 502 EAIKKNDLEVYAVLSG 517
>gnl|CDD|148559 pfam07005, DUF1537, Protein of unknown function, DUF1537. This
conserved region is found in proteins of unknown
function in a range of Proteobacteria as well as the
Gram-positive Oceanobacillus iheyensis.
Length = 224
Score = 28.0 bits (63), Expect = 5.1
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 217 LDCGSTNVLSLQRKVHEVRADIGIALDGDGDRVIIVDEKGAIVNGDQIM-ALIAREWMSH 275
L G ++ +++ +RA + AL G R+++VD A + D A +
Sbjct: 4 LPVGLVDLADVRQGAEALRAALA-ALLAQGVRIVVVD---AETDADLDAIAEALADLPGR 59
Query: 276 SLLRGNG 282
L+ G+
Sbjct: 60 VLVVGSS 66
>gnl|CDD|180296 PRK05865, PRK05865, hypothetical protein; Provisional.
Length = 854
Score = 28.1 bits (62), Expect = 5.5
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 375 FLRSVSVKDTSILNSSSIVQAIADAESELRGIDRLIVRASGTESLIRIMAE-GDDLSRI 432
LR + +DT+ +V A + + RL+ A +IR++AE G+ L ++
Sbjct: 509 LLRGLCGRDTAPAAGPELVSA-----RSVEAVQRLVAAARRDPVVIRLLAEPGERLDKL 562
>gnl|CDD|162559 TIGR01850, argC, N-acetyl-gamma-glutamyl-phosphate reductase,
common form. This model represents the more common of
two related families of
N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme
catalyzing the third step or Arg biosynthesis from Glu.
The two families differ by phylogeny, similarity
clustering, and the gap architecture in a multiple
sequence alignment. Bacterial members of this family
tend to be found within Arg biosynthesis operons.
Length = 346
Score = 27.9 bits (63), Expect = 5.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 236 ADIGIALDGDGDRVIIV 252
DIG A+D RV++V
Sbjct: 293 CDIGFAVDERTGRVVVV 309
>gnl|CDD|177699 PLN00070, PLN00070, aconitate hydratase.
Length = 936
Score = 27.8 bits (62), Expect = 6.0
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 265 MALIAREWMSHSLLRGNGIVTTVMSNIGLERFIAGLGLSL 304
+ L + W+ SL G+G+VT + GL++++ G +
Sbjct: 501 LGLEVKPWIKTSLAPGSGVVTKYLLKSGLQKYLNQQGFHI 540
>gnl|CDD|182649 PRK10689, PRK10689, transcription-repair coupling factor;
Provisional.
Length = 1147
Score = 27.8 bits (62), Expect = 6.4
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 123 TDIEDRIETLLED----DLTSYLSCYDSIGHAKRVDGVHDRYIEHVKR--TLP 169
T++E R+ +LL D D+ + LS Y I AK + + + +E + R LP
Sbjct: 1002 TEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKNENELEEIKVELIDRFGLLP 1054
>gnl|CDD|183952 PRK13289, PRK13289, bifunctional nitric oxide
dioxygenase/dihydropteridine reductase 2; Provisional.
Length = 399
Score = 27.5 bits (62), Expect = 8.3
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 46 VIGKDTRLSGYMLENSLVAGFTAAGMDAFILGPIP 80
G+D G M L A D + GP+P
Sbjct: 334 RAGEDFDSEGLMDLEWLEAWLPDPDADFYFCGPVP 368
>gnl|CDD|182295 PRK10191, PRK10191, putative acyl transferase; Provisional.
Length = 146
Score = 27.2 bits (60), Expect = 9.7
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 18/61 (29%)
Query: 198 ELGADVVVIGDKPNGININLDCGSTNVLSLQRKVHEVRADIGIALDGDGDRVIIVDEKGA 257
ELGA+V+++GD G N+ + GS + LD D ++V EK
Sbjct: 100 ELGANVIILGDITIGNNVTVGAGS------------------VVLDSVPDNALVVGEKAR 141
Query: 258 I 258
+
Sbjct: 142 V 142
>gnl|CDD|184953 PRK14991, PRK14991, tetrathionate reductase subunit A; Provisional.
Length = 1031
Score = 26.9 bits (60), Expect = 10.0
Identities = 10/28 (35%), Positives = 12/28 (42%), Gaps = 8/28 (28%)
Query: 197 WELGADVVVIGDKP--------NGININ 216
ELGA I KP G+N+N
Sbjct: 969 RELGARAHSIDGKPMPANPQIRAGVNLN 996
Database: CddB
Posted date: Feb 4, 2011 9:54 PM
Number of letters in database: 5,994,473
Number of sequences in database: 21,608
Lambda K H
0.321 0.140 0.403
Gapped
Lambda K H
0.267 0.0733 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 7,505,095
Number of extensions: 512821
Number of successful extensions: 1418
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1350
Number of HSP's successfully gapped: 63
Length of query: 448
Length of database: 5,994,473
Length adjustment: 96
Effective length of query: 352
Effective length of database: 3,920,105
Effective search space: 1379876960
Effective search space used: 1379876960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (26.5 bits)