HHsearch alignment for GI: 254780545 and conserved domain: COG1067

>COG1067 LonB Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones].
Probab=96.64  E-value=0.015  Score=37.49  Aligned_cols=223  Identities=26%  Similarity=0.299  Sum_probs=118.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC----CCCHHHHHHHHHHHCC-------------
Q ss_conf             42256988985288999999999874335676642012333110037----8742588899997424-------------
Q gi|254780545|r  142 VGSVTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVG----PPGTGKTLLARAVAGE-------------  204 (647)
Q Consensus       142 ~~~v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~G----ppGtGKTlla~a~a~e-------------  204 (647)
T Consensus        98 ~~~~~~~~~~~~k~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~iv~~~~~~~~~~~~~~~~  171 (647)
T COG1067          98 GRPESFSELLGQKAEEKAEYL--SYLI----LLALLGPIEQQIILYGYNALLPGVLYAVAARIVLYEAKILKRSAVSVPK  171 (647)
T ss_pred             CCCCCHHHHHHHHHHHHHHHH--HHHH----HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             687225799985636788777--7666----8876224666665404553462167789988887653125310333045


Q ss_pred             --------CCCCEECCCHHHHHHHHH------HCC------HHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCCC
Q ss_conf             --------699702058578864442------033------245999999998737801206323564144557898862
Q gi|254780545|r  205 --------ANVPFFTISGSDFVELFV------GVG------ASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGN  264 (647)
Q Consensus       205 --------~~~~f~~~~~s~~~~~~~------g~g------~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~~~~  264 (647)
T Consensus       172 ~~~~~~~~~~~p~v~a~~~~~~~LlG~Vr~~~~qG~l~~~~~~~i~p-GaVHkAng-GVLiIdei~lL~~~---------  240 (647)
T COG1067         172 NFVELSPLDGAPVVFATGAIADQLLGSVRHDPYQGGLGTTGHIRVKP-GAVHKANG-GVLIIDEIGLLAQP---------  240 (647)
T ss_pred             HHHHCCCCCCCCEEECCCCCHHHCCEEEEECCCCCCCCCCCCCCCCC-CCCCCCCC-CEEEEEHHHHHCCH---------
T ss_conf             56540235589679668777465361277768887667888642367-61101258-47999756632839---------


Q ss_pred             HHHHHHHHHHHHHHC-C-------CCCC-----------CCEEEEEECCCCCC-----CCHHHCCCCCCCC--EEEECHH
Q ss_conf             688988998998530-3-------2357-----------78299996298100-----8833316564231--4100013
Q gi|254780545|r  265 DEREQTLNQLLVEMD-G-------FESS-----------EGVILIAATNRPDV-----LDAALLRPGRFDR--QITVPNP  318 (647)
Q Consensus       265 ~e~~~~ln~ll~~md-g-------~~~~-----------~~v~vi~aTn~~~~-----lD~al~RpgRfd~--~i~~~~P  318 (647)
T Consensus       241 -----~~w~~LKa~~~k~~~~~~~~~~s~~~~v~~e~vP~d~klI~~Gn~~~l~~l~~~~~~r~~--g~~y~ae~~~~m~  313 (647)
T COG1067         241 -----LQWKLLKALLDKEQPIWGSSEPSSGAPVRPESVPLDLKLILAGNREDLEDLHEPDRSRIE--GFGYEAEFEDTMP  313 (647)
T ss_pred             -----HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHHH--HCCEEEEECCCCC
T ss_conf             -----899999999824456657674024861578885565489940889999765534777884--0556899768889


Q ss_pred             -HHHHHHHHHHHHHCCCCCC---CCCC------HHHHHHHHHC------CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf             -4788999999985488777---3211------0245441203------7989999999998764553202421045689
Q gi|254780545|r  319 -DIVGREHILMVHSRNVPLA---PNVI------LKTIARGTPG------FSGADLRNLVNEAALMAARRNRRLVTMQEFE  382 (647)
Q Consensus       319 -~~~~r~~i~~~~~~~~~~~---~~~d------~~~la~~t~g------~sgAdi~~~~~eAa~~a~r~~~~~i~~~dl~  382 (647)
T Consensus       314 ~~~~nr~k~~~~~~q~v~~d~~ip~~~~~Av~~li~~a~R~Ag~~~~Ltl~~rdl~~lv~~A~~ia~~~~~~~I~ae~Ve  393 (647)
T COG1067         314 ITDANRSKLVQFYVQELARDGNIPHLDKDAVEELIREAARRAGDQNKLTLRLRDLGNLVREAGDIAVSEGRKLITAEDVE  393 (647)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf             98689999999999999862899988889999999999986165650214899999999986688853786647699999


Q ss_pred             HHHHHC
Q ss_conf             997501
Q gi|254780545|r  383 DAKDKI  388 (647)
Q Consensus       383 ~A~~rv  388 (647)
T Consensus       394 ~a~~~~  399 (647)
T COG1067         394 EALQKR  399 (647)
T ss_pred             HHHHHH
T ss_conf             999874