HHsearch alignment for GI: 254780545 and conserved domain: COG1224

Probab=99.37  E-value=1.5e-11  Score=102.53  Aligned_cols=73  Identities=42%  Similarity=0.621  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCC--CCEECCCHHHHHHHHHHC
Q ss_conf             988985288999999999874335676642012333110037874258889999742469--970205857886444203
Q gi|254780545|r  147 FKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEAN--VPFFTISGSDFVELFVGV  224 (647)
Q Consensus       147 f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~--~~f~~~~~s~~~~~~~g~  224 (647)
T Consensus        38 ~dG~VGQ~~AReAaGvIv~mik~-------gk~aGrgiLi~GppgTGKTAlA~gIa~eLG~dvPF~~isgsEiYS~E~kK  110 (450)
T COG1224          38 GDGLVGQEEAREAAGVIVKMIKQ-------GKMAGRGILIVGPPGTGKTALAMGIARELGEDVPFVAISGSEIYSLEVKK  110 (450)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHH-------CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCH
T ss_conf             88611249888762599999971-------76666179997899976889999999985899982150133223310008


Q ss_pred             CH
Q ss_conf             32
Q gi|254780545|r  225 GA  226 (647)
Q Consensus       225 g~  226 (647)
T Consensus       111 TE  112 (450)
T COG1224         111 TE  112 (450)
T ss_pred             HH
T ss_conf             89