HHsearch alignment for GI: 254780545 and conserved domain: COG1241
>COG1241 MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair].
Probab=97.38 E-value=0.00054 Score=47.87 Aligned_cols=250 Identities=26% Similarity=0.329 Sum_probs=123.3
Q ss_pred CEEECCCCCHHHHHHHHHHHCCCC-CCEECCCHHHHHHHHHHCCHHHHHHHH--H---HHHH---HCCHHEEHHHHHHHH
Q ss_conf 110037874258889999742469-970205857886444203324599999--9---9987---378012063235641
Q gi|254780545|r 183 GVLLVGPPGTGKTLLARAVAGEAN-VPFFTISGSDFVELFVGVGASRVRDMF--E---QAKN---NSPCIVFVDEIDAVG 253 (647)
Q Consensus 183 g~ll~GppGtGKTlla~a~a~e~~-~~f~~~~~s~~~~~~~g~g~~~vr~lf--~---~a~~---~~p~iifiDeida~~ 253 (647)
T Consensus 321 nILLvGDPgtaKSqlLk~v~~~aPr~vytsgkgss----~~GLTAav~rd~~tge~~LeaGALVlAD~Gv~cIDEfdKm~ 396 (682)
T COG1241 321 HILLVGDPGTAKSQLLKYVAKLAPRGVYTSGKGSS----AAGLTAAVVRDKVTGEWVLEAGALVLADGGVCCIDEFDKMN 396 (682)
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCC----CCCCEEEEEECCCCCEEEEECCEEEEECCCEEEEEECCCCC
T ss_conf 69981798251999999988648840797264125----45730699970677607886777999249779997056777
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCC--CC-CCCC--------EEEEEECCCCC-------------CCCHHHCCCCCC
Q ss_conf 445578988626889889989985303--23-5778--------29999629810-------------088333165642
Q gi|254780545|r 254 RHRGIGLGGGNDEREQTLNQLLVEMDG--FE-SSEG--------VILIAATNRPD-------------VLDAALLRPGRF 309 (647)
Q Consensus 254 ~~r~~~~~~~~~e~~~~ln~ll~~mdg--~~-~~~~--------v~vi~aTn~~~-------------~lD~al~RpgRf 309 (647)
T Consensus 397 -----------~---~dr~aihEaMEQQtIsIaKAGI~atLnARcsvLAAaNP~~Gryd~~~~~~enI~l~~~lLS--RF 460 (682)
T COG1241 397 -----------E---EDRVAIHEAMEQQTISIAKAGITATLNARCSVLAAANPKFGRYDPKKTVAENINLPAPLLS--RF 460 (682)
T ss_pred -----------H---HHHHHHHHHHHHCEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHH--HC
T ss_conf -----------6---7899999998752751205542541114444566518877767999997885589835775--17
Q ss_pred CCEEE-ECHHHHHHH----HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 31410-001347889----9999998548877732110245441203798999999999876455320242104568999
Q gi|254780545|r 310 DRQIT-VPNPDIVGR----EHILMVHSRNVPLAPNVILKTIARGTPGFSGADLRNLVNEAALMAARRNRRLVTMQEFEDA 384 (647)
Q Consensus 310 d~~i~-~~~P~~~~r----~~i~~~~~~~~~~~~~~d~~~la~~t~g~sgAdi~~~~~eAa~~a~r~~~~~i~~~dl~~A 384 (647)
T Consensus 461 DLifvl~D~~d~~~D~~ia~hil~~h~~~~~~~~-----------~~~~~--~~~----------------~~~~~~~~l 511 (682)
T COG1241 461 DLIFVLKDDPDEEKDEEIAEHILDKHRGEEPEET-----------ISLDG--VDE----------------VEERDFELL 511 (682)
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC-----------CCCCC--CCC----------------CCCCCHHHH
T ss_conf 7547705788853359999999998634565322-----------33332--222----------------234658999
Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEEHHHHHHCCCHHHHHHHHHH
Q ss_conf 75013686556766686677899999999999998505877323432201455564056400244322689999999999
Q gi|254780545|r 385 KDKILMGAERRSTAMTEEEKKITAYHEAGHAVVACHVPKADPLHKATIIPRGRALGMVMQLPEADRHSTTYVWMTSRLTI 464 (647)
Q Consensus 385 ~~rv~~G~ek~~~~~~~~ek~~vAyHEAGHAlva~~l~~~~~v~kVTIipRg~alG~t~~~p~~d~~~~tk~~l~~~i~v 464 (647)
T Consensus 512 rkYI~YAR~~v~P~lt~ea~---------e~l~~~Yv~---------~--Rk~~~~--~~--~~~~~piT~RqLEsiiRL 567 (682)
T COG1241 512 RKYISYARKNVTPVLTEEAR---------EELEDYYVE---------M--RKKSAL--VE--EKRTIPITARQLESIIRL 567 (682)
T ss_pred HHHHHHHHCCCCCCCCHHHH---------HHHHHHHHH---------H--HHCCCC--CC--CCCCCCCCHHHHHHHHHH
T ss_conf 99999875058961289999---------999999987---------6--520122--34--567545619999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 987898888861368756523355899999999998624888766733
Q gi|254780545|r 465 LMGGRVAEEFTFGEDNVTSGAMSDIEYATKLARVMVTQFGFSNLLGKV 512 (647)
Q Consensus 465 ~LgGRaAEei~fG~~~ittGAs~DL~~AT~iA~~mV~~~GMs~~lG~i 512 (647)
T Consensus 568 aeA~---Ak~rLS-~~V~---~eD~~eAi~lv~~~l~~v~~dp~~g~~ 608 (682)
T COG1241 568 AEAH---AKMRLS-DVVE---EEDVDEAIRLVDFSLKTVAVDPEKGKI 608 (682)
T ss_pred HHHH---HHHHCC-CCCC---HHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf 9998---865444-7778---899999999999998886137567721