HHsearch alignment for GI: 254780545 and conserved domain: KOG0477

Probab=97.15  E-value=0.0064  Score=40.10  Aligned_cols=138  Identities=25%  Similarity=0.376  Sum_probs=69.6

Q ss_pred             CEEECCCCCHHHHHHHHHHHCCCCCCEECCC-HHHHHHHHHHCCHHHHHH-----HHHHHHH---HCCHHEEHHHHHHHH
Q ss_conf             1100378742588899997424699702058-578864442033245999-----9999987---378012063235641
Q gi|254780545|r  183 GVLLVGPPGTGKTLLARAVAGEANVPFFTIS-GSDFVELFVGVGASRVRD-----MFEQAKN---NSPCIVFVDEIDAVG  253 (647)
Q Consensus       183 g~ll~GppGtGKTlla~a~a~e~~~~f~~~~-~s~~~~~~~g~g~~~vr~-----lf~~a~~---~~p~iifiDeida~~  253 (647)
T Consensus       484 nvLL~GDPGTaKSQFLKY~eK~s~RAV~tTGqGA----SavGLTa~v~KdPvtrEWTLEaGALVLADkGvClIDEFDKMn  559 (854)
T KOG0477         484 NVLLLGDPGTAKSQFLKYAEKTSPRAVFTTGQGA----SAVGLTAYVRKDPVTREWTLEAGALVLADKGVCLIDEFDKMN  559 (854)
T ss_pred             EEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCC----CCCCEEEEEEECCCCCEEEECCCEEEECCCCEEEEEHHHHHC
T ss_conf             2898469982289999999862753168506775----433326887517865303651672897268537741211204


Q ss_pred             CCCCCCCCCCCHHHHH-HHH----HHHHHHCCCCCCCCEEEEEECCC--------------CCCCCHHHCCCCCCCCEEE
Q ss_conf             4455789886268898-899----89985303235778299996298--------------1008833316564231410
Q gi|254780545|r  254 RHRGIGLGGGNDEREQ-TLN----QLLVEMDGFESSEGVILIAATNR--------------PDVLDAALLRPGRFDRQIT  314 (647)
Q Consensus       254 ~~r~~~~~~~~~e~~~-~ln----~ll~~mdg~~~~~~v~vi~aTn~--------------~~~lD~al~RpgRfd~~i~  314 (647)
T Consensus       560 dq---DRtSIHEAMEQQSISISKAGIVtsLqA-----rctvIAAanPigGRY~~s~tFaqNV~ltePIlS---RFDiLcV  628 (854)
T KOG0477         560 DQ---DRTSIHEAMEQQSISISKAGIVTSLQA-----RCTVIAAANPIGGRYNPSLTFAQNVDLTEPILS---RFDILCV  628 (854)
T ss_pred             CC---CCCHHHHHHHHCCHHHHHHHHHHHHHH-----HHHHHEECCCCCCCCCCCCCHHHCCCCCCCHHH---HCCEEEE
T ss_conf             01---101599998751201446668998875-----544300027777756875114330554444121---1132456


Q ss_pred             EC---HHHHHHH--HHHHHHHHCCCC
Q ss_conf             00---1347889--999999854887
Q gi|254780545|r  315 VP---NPDIVGR--EHILMVHSRNVP  335 (647)
Q Consensus       315 ~~---~P~~~~r--~~i~~~~~~~~~  335 (647)
T Consensus       629 vkD~vd~~~De~lA~fVV~Sh~r~hp  654 (854)
T KOG0477         629 VKDTVDPVQDEKLAKFVVGSHVRHHP  654 (854)
T ss_pred             EECCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             40355813678899999876740487