HHsearch alignment for GI: 254780545 and conserved domain: KOG0480

Probab=97.27  E-value=0.0011  Score=45.79  Aligned_cols=164  Identities=25%  Similarity=0.332  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---EEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHH
Q ss_conf             2569889852889999999998743356766420123331---1003787425888999974246997020585788644
Q gi|254780545|r  144 SVTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHG---VLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVEL  220 (647)
Q Consensus       144 ~v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g---~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~  220 (647)
T Consensus       341 ~Sl~PsIyGhe~VK~Gil--L~LfGGv~K~a~eg-~~lRGDinv~iVGDPgt~KSQfLk~v~~fsPR~-vYtsGka--SS  414 (764)
T KOG0480         341 NSLFPSIYGHELVKAGIL--LSLFGGVHKSAGEG-TSLRGDINVCIVGDPGTGKSQFLKAVCAFSPRS-VYTSGKA--SS  414 (764)
T ss_pred             HHHCCCCCCHHHHHHHHH--HHHHCCCCCCCCCC-CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC-EEECCCC--CC
T ss_conf             763762015389986689--99847854357898-654677318995799713889999986548731-5850763--44


Q ss_pred             HHHCCHHHHHHH--HH---HHHH---HCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC--CC-CCCCEE-
Q ss_conf             420332459999--99---9987---378012063235641445578988626889889989985303--23-577829-
Q gi|254780545|r  221 FVGVGASRVRDM--FE---QAKN---NSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDG--FE-SSEGVI-  288 (647)
Q Consensus       221 ~~g~g~~~vr~l--f~---~a~~---~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg--~~-~~~~v~-  288 (647)
T Consensus       415 aAGLTaaVvkD~esgdf~iEAGALmLADnGICCIDEFDKMd~------------~dqv--AihEAMEQQtISIaKAGv~a  480 (764)
T KOG0480         415 AAGLTAAVVKDEESGDFTIEAGALMLADNGICCIDEFDKMDV------------KDQV--AIHEAMEQQTISIAKAGVVA  480 (764)
T ss_pred             CCCCEEEEEECCCCCCEEEECCCEEECCCCEEEECHHCCCCH------------HHHH--HHHHHHHHHEEHHEECCEEE
T ss_conf             346468997637777335534737881696688310003570------------7689--99999875100033020688


Q ss_pred             -------EEEECCCC-------------CCCCHHHCCCCCCCC-EEEECHHHHHHHHHHHHH
Q ss_conf             -------99962981-------------008833316564231-410001347889999999
Q gi|254780545|r  289 -------LIAATNRP-------------DVLDAALLRPGRFDR-QITVPNPDIVGREHILMV  329 (647)
Q Consensus       289 -------vi~aTn~~-------------~~lD~al~RpgRfd~-~i~~~~P~~~~r~~i~~~  329 (647)
T Consensus       481 TLnARtSIlAAANPv~GhYdR~ktl~eNi~msApimS--RFDL~FiLlD~~nE~~D~~ia~h  540 (764)
T KOG0480         481 TLNARTSILAAANPVGGHYDRKKTLRENINMSAPIMS--RFDLFFILLDDCNEVVDYAIARH  540 (764)
T ss_pred             EECCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHH--HHCEEEEEECCCCHHHHHHHHHH
T ss_conf             6222355555327767745533006652277804542--22279999357866777999999