HHsearch alignment for GI: 254780545 and conserved domain: KOG0481

Probab=94.87  E-value=0.087  Score=31.92  Aligned_cols=168  Identities=27%  Similarity=0.358  Sum_probs=84.2

Q ss_pred             CEEECCCCCHHHHHHHHHHHCCCCCCEECCC--HHHHHHHHHHCCHHHHHHHH-----HH--HHH-HCCHHEEHHHHHHH
Q ss_conf             1100378742588899997424699702058--57886444203324599999-----99--987-37801206323564
Q gi|254780545|r  183 GVLLVGPPGTGKTLLARAVAGEANVPFFTIS--GSDFVELFVGVGASRVRDMF-----EQ--AKN-NSPCIVFVDEIDAV  252 (647)
Q Consensus       183 g~ll~GppGtGKTlla~a~a~e~~~~f~~~~--~s~~~~~~~g~g~~~vr~lf-----~~--a~~-~~p~iifiDeida~  252 (647)
T Consensus       366 NVLLLGDPgtAKSQlLKFvEkvsPIaV-YTSGKGSS----AAGLTASV~RD~~tReFylEGGAMVLADgGVvCIDEFDK-  439 (729)
T KOG0481         366 NVLLLGDPGTAKSQLLKFVEKVSPIAV-YTSGKGSS----AAGLTASVIRDPSTREFYLEGGAMVLADGGVVCIDEFDK-  439 (729)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEE-EECCCCCC----CCCCEEEEEECCCCCEEEEECCEEEEECCCEEEEEHHHC-
T ss_conf             289836985268999999986086379-94688764----334624678668763389826659981697898300002-


Q ss_pred             HCCCCCCCCCCCHHH-HHHHHHHHHHHCCCCC--CCCEEEEEECCCC-----------CCCC--HHHCCCCCCCCEEEEC
Q ss_conf             144557898862688-9889989985303235--7782999962981-----------0088--3331656423141000
Q gi|254780545|r  253 GRHRGIGLGGGNDER-EQTLNQLLVEMDGFES--SEGVILIAATNRP-----------DVLD--AALLRPGRFDRQITVP  316 (647)
Q Consensus       253 ~~~r~~~~~~~~~e~-~~~ln~ll~~mdg~~~--~~~v~vi~aTn~~-----------~~lD--~al~RpgRfd~~i~~~  316 (647)
T Consensus       440 --Mre~DRVAIHEAMEQQTISI---AKAGITT~LNSRtSVLAAANpvfGRyDd~Kt~~dNIDf~~TILS--RFDmIFIVK  512 (729)
T KOG0481         440 --MREDDRVAIHEAMEQQTISI---AKAGITTTLNSRTSVLAAANPVFGRYDDTKTGEDNIDFMPTILS--RFDMIFIVK  512 (729)
T ss_pred             --CCCHHHHHHHHHHHHHHHHH---HHHCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH--HCCEEEEEE
T ss_conf             --58201568989987655777---55052256424033445337866554346785556322346764--513799983


Q ss_pred             HHHHHHH-----HHHHHHHHCC--CCCCC------CCCHHHHHHH--------HHCCCHHHHHHHHHH
Q ss_conf             1347889-----9999998548--87773------2110245441--------203798999999999
Q gi|254780545|r  317 NPDIVGR-----EHILMVHSRN--VPLAP------NVILKTIARG--------TPGFSGADLRNLVNE  363 (647)
Q Consensus       317 ~P~~~~r-----~~i~~~~~~~--~~~~~------~~d~~~la~~--------t~g~sgAdi~~~~~e  363 (647)
T Consensus       513 D~h~~~~D~~lAkHVI~vH~~~~n~~~~~~~~~~~ei~~~~~KryI~YcR~kc~PrLs~~AaekL~~~  580 (729)
T KOG0481         513 DEHDEERDITLAKHVINVHVSKANAQTDSQEENEGEIPIEKLKRYIQYCRLKCGPRLSAEAAEKLSSR  580 (729)
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf             36760353689877531000444455674334788223899999999998603888899999999877