HHsearch alignment for GI: 254780545 and conserved domain: KOG0652

Probab=100.00  E-value=0  Score=471.72  Aligned_cols=252  Identities=41%  Similarity=0.686  Sum_probs=242.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHH
Q ss_conf             112422569889852889999999-9987433567664201233311003787425888999974246997020585788
Q gi|254780545|r  139 SGNVGSVTFKDVAGVDEAKEDLQE-IVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDF  217 (647)
Q Consensus       139 ~~~~~~v~f~dv~g~~~~k~~~~~-~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~  217 (647)
T Consensus       162 vDekPtE~YsDiGGldkQIqELvEAiVLpmth~ekF~~lgi~pPKGvLmYGPPGTGKTlmARAcAaqT~aTFLKLAgPQL  241 (424)
T KOG0652         162 VDEKPTEQYSDIGGLDKQIQELVEAIVLPMTHKEKFENLGIRPPKGVLMYGPPGTGKTLMARACAAQTNATFLKLAGPQL  241 (424)
T ss_pred             ECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHCCHHH
T ss_conf             04687432000325789999999886145656878874688899722765799975779999998740106887326477


Q ss_pred             HHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
Q ss_conf             64442033245999999998737801206323564144557898862688988998998530323577829999629810
Q gi|254780545|r  218 VELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPD  297 (647)
Q Consensus       218 ~~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~  297 (647)
T Consensus       242 VQMfIGdGAkLVRDAFaLAKEkaP~IIFIDElDAIGtKRfDSek~GDREVQRTMLELLNQLDGFss~~~vKviAATNRvD  321 (424)
T KOG0652         242 VQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVD  321 (424)
T ss_pred             HHHHHCCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
T ss_conf             76653341889999998753349838997300232334365312343899999999998604899756267885216434


Q ss_pred             CCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             08833316564231410001347889999999854887773211024544120379899999999987645532024210
Q gi|254780545|r  298 VLDAALLRPGRFDRQITVPNPDIVGREHILMVHSRNVPLAPNVILKTIARGTPGFSGADLRNLVNEAALMAARRNRRLVT  377 (647)
Q Consensus       298 ~lD~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~~~~~~~~~d~~~la~~t~g~sgAdi~~~~~eAa~~a~r~~~~~i~  377 (647)
T Consensus       322 iLDPALlRSGRLDRKIEfP~Pne~aRarIlQIHsRKMnv~~DvNfeELaRsTddFNGAQcKAVcVEAGMiALRr~atev~  401 (424)
T KOG0652         322 ILDPALLRSGRLDRKIEFPHPNEEARARILQIHSRKMNVSDDVNFEELARSTDDFNGAQCKAVCVEAGMIALRRGATEVT  401 (424)
T ss_pred             CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHEEEHHHHHHHHHHCCCCCCC
T ss_conf             34888864466444434889977898899988640057788879899853335667232133005540899864653012


Q ss_pred             HHHHHHHHHHCCC
Q ss_conf             4568999750136
Q gi|254780545|r  378 MQEFEDAKDKILM  390 (647)
Q Consensus       378 ~~dl~~A~~rv~~  390 (647)
T Consensus       402 heDfmegI~eVqa  414 (424)
T KOG0652         402 HEDFMEGILEVQA  414 (424)
T ss_pred             HHHHHHHHHHHHH
T ss_conf             7889999999998