HHsearch alignment for GI: 254780545 and conserved domain: KOG0728

Probab=100.00  E-value=0  Score=460.79  Aligned_cols=251  Identities=42%  Similarity=0.733  Sum_probs=244.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHH
Q ss_conf             124225698898528899999999987-4335676642012333110037874258889999742469970205857886
Q gi|254780545|r  140 GNVGSVTFKDVAGVDEAKEDLQEIVDF-LCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFV  218 (647)
Q Consensus       140 ~~~~~v~f~dv~g~~~~k~~~~~~v~~-l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~  218 (647)
T Consensus       139 eKvPDStYeMiGgLd~QIkeIkEVIeLPvKHPELF~aLGIaQPKGvlLygppgtGktLlaraVahht~c~firvsgselv  218 (404)
T KOG0728         139 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV  218 (404)
T ss_pred             HHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCEEEEEECHHHHH
T ss_conf             30783088875038889999999982656687899851878876048846999756299999875414079996449999


Q ss_pred             HHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
Q ss_conf             44420332459999999987378012063235641445578988626889889989985303235778299996298100
Q gi|254780545|r  219 ELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDV  298 (647)
Q Consensus       219 ~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~  298 (647)
T Consensus       219 qk~igegsrmvrelfvmarehapsiifmdeidsigs~r~e~~~ggdsevqrtmlellnqldgfeatknikvimatnridi  298 (404)
T KOG0728         219 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI  298 (404)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
T ss_conf             99850138999999999875088267500001212343457898638999999999974024000366269984164222


Q ss_pred             CCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf             88333165642314100013478899999998548877732110245441203798999999999876455320242104
Q gi|254780545|r  299 LDAALLRPGRFDRQITVPNPDIVGREHILMVHSRNVPLAPNVILKTIARGTPGFSGADLRNLVNEAALMAARRNRRLVTM  378 (647)
Q Consensus       299 lD~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~~~~~~~~~d~~~la~~t~g~sgAdi~~~~~eAa~~a~r~~~~~i~~  378 (647)
T Consensus       299 ld~allrpgridrkiefp~p~e~ar~~ilkihsrkmnl~rgi~l~kiaekm~gasgaevk~vcteagm~alrerrvhvtq  378 (404)
T KOG0728         299 LDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEKMPGASGAEVKGVCTEAGMYALRERRVHVTQ  378 (404)
T ss_pred             CCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf             46866387754555648998778887899885553013306678999986789863025434335457888765200238


Q ss_pred             HHHHHHHHHCCC
Q ss_conf             568999750136
Q gi|254780545|r  379 QEFEDAKDKILM  390 (647)
Q Consensus       379 ~dl~~A~~rv~~  390 (647)
T Consensus       379 edfemav~kvm~  390 (404)
T KOG0728         379 EDFEMAVAKVMQ  390 (404)
T ss_pred             HHHHHHHHHHHH
T ss_conf             889999999972