HHsearch alignment for GI: 254780545 and conserved domain: KOG0730

Probab=100.00  E-value=0  Score=592.35  Aligned_cols=247  Identities=43%  Similarity=0.758  Sum_probs=235.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHH
Q ss_conf             1124225698898528899999999987-433567664201233311003787425888999974246997020585788
Q gi|254780545|r  139 SGNVGSVTFKDVAGVDEAKEDLQEIVDF-LCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDF  217 (647)
Q Consensus       139 ~~~~~~v~f~dv~g~~~~k~~~~~~v~~-l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~  217 (647)
T Consensus       425 ~ve~p~v~W~dIGGlE~lK~elq~~V~~p~~~pe~F~r~Gi~ppkGVLlyGPPGC~KT~lAkalAne~~~nFlsvkgpEL  504 (693)
T KOG0730         425 LVEMPNVSWDDIGGLEELKRELQQAVEWPLKHPEKFARFGISPPKGVLLYGPPGCGKTLLAKALANEAGMNFLSVKGPEL  504 (693)
T ss_pred             ECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCHHH
T ss_conf             02478878220457899999999998616656599987257887547777899862478999986463587264157899


Q ss_pred             HHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
Q ss_conf             64442033245999999998737801206323564144557898862688988998998530323577829999629810
Q gi|254780545|r  218 VELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPD  297 (647)
Q Consensus       218 ~~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~  297 (647)
T Consensus       505 ~sk~vGeSEr~ir~iF~kAR~~aP~IiFfDEiDsi~~~R~g~~~---~v~~RVlsqLLtEmDG~e~~k~V~ViAATNRpd  581 (693)
T KOG0730         505 FSKYVGESERAIREVFRKARQVAPCIIFFDEIDALAGSRGGSSS---GVTDRVLSQLLTEMDGLEALKNVLVIAATNRPD  581 (693)
T ss_pred             HHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHH
T ss_conf             87751825899999999986269837744666666630478755---148999999998700410147089995058810


Q ss_pred             CCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH--CCC
Q ss_conf             088333165642314100013478899999998548877732110245441203798999999999876455320--242
Q gi|254780545|r  298 VLDAALLRPGRFDRQITVPNPDIVGREHILMVHSRNVPLAPNVILKTIARGTPGFSGADLRNLVNEAALMAARRN--RRL  375 (647)
Q Consensus       298 ~lD~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~~~~~~~~~d~~~la~~t~g~sgAdi~~~~~eAa~~a~r~~--~~~  375 (647)
T Consensus       582 ~ID~ALlRPGRlD~iiyVplPD~~aR~~Ilk~~~kkmp~~~~vdl~~La~~T~g~SGAel~~lCq~A~~~a~~e~i~a~~  661 (693)
T KOG0730         582 MIDPALLRPGRLDRIIYVPLPDLEARLEILKQCAKKMPFSEDVDLEELAQATEGYSGAEIVAVCQEAALLALRESIEATE  661 (693)
T ss_pred             HCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             12697759865330575158347889999999973399986556999999854677389999999999999987526543


Q ss_pred             CCHHHHHHHHHHC
Q ss_conf             1045689997501
Q gi|254780545|r  376 VTMQEFEDAKDKI  388 (647)
Q Consensus       376 i~~~dl~~A~~rv  388 (647)
T Consensus       662 i~~~hf~~al~~~  674 (693)
T KOG0730         662 ITWQHFEEALKAV  674 (693)
T ss_pred             CCHHHHHHHHHHC
T ss_conf             4489999999850