HHsearch alignment for GI: 254780545 and conserved domain: KOG0741
>KOG0741 consensus.
Probab=100.00 E-value=0 Score=379.99 Aligned_cols=298 Identities=33% Similarity=0.528 Sum_probs=228.6
Q ss_pred CCCCCCCCC--CCCCHHHHHH--HHHHHHHHHHH-HH-HHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCC
Q ss_conf 632100001--1242256988--98528899999-99-998743356766420123331100378742588899997424
Q gi|254780545|r 131 GKSKAKLLS--GNVGSVTFKD--VAGVDEAKEDL-QE-IVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGE 204 (647)
Q Consensus 131 GKSkAk~~~--~~~~~v~f~d--v~g~~~~k~~~-~~-~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e 204 (647)
T Consensus 200 ~~~~~k~~~n~ii~Pdf~Fe~mGIGGLd~EFs~IFRRAFAsRvFpp~vie~lGi~HVKGiLLyGPPGTGKTLiARqIGkM 279 (744)
T KOG0741 200 GKSKTKPASNSIINPDFNFESMGIGGLDKEFSDIFRRAFASRVFPPEVIEQLGIKHVKGILLYGPPGTGKTLIARQIGKM 279 (744)
T ss_pred CCCCCCCHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 36667722112318998714326665117899999998776329988998719511235788779998701899998787
Q ss_pred CCC-CEECCCHHHHHHHHHHCCHHHHHHHHHHHHHH--------CCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 699-70205857886444203324599999999873--------780120632356414455789886268898899899
Q gi|254780545|r 205 ANV-PFFTISGSDFVELFVGVGASRVRDMFEQAKNN--------SPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLL 275 (647)
Q Consensus 205 ~~~-~f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~--------~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll 275 (647)
T Consensus 280 LNArePKIVNGPeIL~KYVGeSE~NvR~LFaDAEeE~r~~g~~SgLHIIIFDEiDAICKqRGS~~g-~TGVhD~VVNQLL 358 (744)
T KOG0741 280 LNAREPKIVNGPEILNKYVGESEENVRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAG-STGVHDTVVNQLL 358 (744)
T ss_pred HCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCC-CCCCCHHHHHHHH
T ss_conf 457998634757889876063078899998757999984376677259996346799974488789-8863189999999
Q ss_pred HHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCC----CCCCCCHHHHHHHHHC
Q ss_conf 853032357782999962981008833316564231410001347889999999854887----7732110245441203
Q gi|254780545|r 276 VEMDGFESSEGVILIAATNRPDVLDAALLRPGRFDRQITVPNPDIVGREHILMVHSRNVP----LAPNVILKTIARGTPG 351 (647)
Q Consensus 276 ~~mdg~~~~~~v~vi~aTn~~~~lD~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~~~~----~~~~~d~~~la~~t~g 351 (647)
T Consensus 359 sKmDGVeqLNNILVIGMTNR~DlIDEALLRPGRlEVqmEIsLPDE~gRlQIl~IHT~rMre~~~l~~dVdl~elA~lTKN 438 (744)
T KOG0741 359 SKMDGVEQLNNILVIGMTNRKDLIDEALLRPGRLEVQMEISLPDEKGRLQILKIHTKRMRENNKLSADVDLKELAALTKN 438 (744)
T ss_pred HHCCCHHHHHCEEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHCC
T ss_conf 85322876616789940473666788755887169999984688767278887144556651787777698999998557
Q ss_pred CCHHHHHHHHHHHHHHHHHHH---------------CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH------------
Q ss_conf 798999999999876455320---------------24210456899975013686556766686677------------
Q gi|254780545|r 352 FSGADLRNLVNEAALMAARRN---------------RRLVTMQEFEDAKDKILMGAERRSTAMTEEEK------------ 404 (647)
Q Consensus 352 ~sgAdi~~~~~eAa~~a~r~~---------------~~~i~~~dl~~A~~rv~~G~ek~~~~~~~~ek------------ 404 (647)
T Consensus 439 fSGAEleglVksA~S~A~nR~vk~~~~~~~~~~~~e~lkV~r~DFl~aL~dVk-----PAFG~see~l~~~~~~Gmi~~g 513 (744)
T KOG0741 439 FSGAELEGLVKSAQSFAMNRHVKAGGKVEVDPVAIENLKVTRGDFLNALEDVK-----PAFGISEEDLERFVMNGMINWG 513 (744)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHEEECHHHHHHHHHHCC-----CCCCCCHHHHHHHHHCCCEEEC
T ss_conf 86267899999888898886613686311271114320202887898987357-----5448788999999857854516
Q ss_pred -HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
Q ss_conf -8999999999999985058773234322014
Q gi|254780545|r 405 -KITAYHEAGHAVVACHVPKADPLHKATIIPR 435 (647)
Q Consensus 405 -~~vAyHEAGHAlva~~l~~~~~v~kVTIipR 435 (647)
T Consensus 514 ~~v~~il~~G~llv~qv-k~s~~s~lvSvLl~ 544 (744)
T KOG0741 514 PPVTRILDDGKLLVQQV-KNSERSPLVSVLLE 544 (744)
T ss_pred CCHHHHHHHHHHHHHHH-HCCCCCCCEEEEEE
T ss_conf 30778876688999986-33466763589986