HHsearch alignment for GI: 254780545 and conserved domain: KOG0742
>KOG0742 consensus.
Probab=99.93 E-value=7.7e-25 Score=198.73 Aligned_cols=218 Identities=28% Similarity=0.428 Sum_probs=163.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHH
Q ss_conf 42256988985288999999999874335676642012333110037874258889999742469970205857886444
Q gi|254780545|r 142 VGSVTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVELF 221 (647)
Q Consensus 142 ~~~v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~ 221 (647)
T Consensus 349 ~gk~pl~~ViL~psLe~Rie~lA~aTaNTK~----h~apfRNilfyGPPGTGKTm~ArelAr~SGlDYA~mTGGDVAPl- 423 (630)
T KOG0742 349 RGKDPLEGVILHPSLEKRIEDLAIATANTKK----HQAPFRNILFYGPPGTGKTMFARELARHSGLDYAIMTGGDVAPL- 423 (630)
T ss_pred CCCCCCCCEECCHHHHHHHHHHHHHHCCCCC----CCCHHHHEEEECCCCCCHHHHHHHHHHHCCCCEEHHCCCCCCCC-
T ss_conf 5777767841277799999999887404300----24304400324799986049999998852874100137875552-
Q ss_pred HHCCHHHHHHHHHHHHHHC-CHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 2033245999999998737-801206323564144557898862688988998998530323577829999629810088
Q gi|254780545|r 222 VGVGASRVRDMFEQAKNNS-PCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDVLD 300 (647)
Q Consensus 222 ~g~g~~~vr~lf~~a~~~~-p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~lD 300 (647)
T Consensus 424 G~qaVTkiH~lFDWakkS~rGLllFIDEADAFLceRnktymS-Ea-qRsaLNAlLfRT-G-dqSrdivLvlAtNrpgdlD 499 (630)
T KOG0742 424 GAQAVTKIHKLFDWAKKSRRGLLLFIDEADAFLCERNKTYMS-EA-QRSALNALLFRT-G-DQSRDIVLVLATNRPGDLD 499 (630)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCC-HH-HHHHHHHHHHHC-C-CCCCCEEEEEECCCCCCHH
T ss_conf 178899999987887515664499861167899875201025-88-999998898762-5-6554268996058832101
Q ss_pred HHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCC---C---------------------CCCC---CCHHHHHHHHHCCC
Q ss_conf 3331656423141000134788999999985488---7---------------------7732---11024544120379
Q gi|254780545|r 301 AALLRPGRFDRQITVPNPDIVGREHILMVHSRNV---P---------------------LAPN---VILKTIARGTPGFS 353 (647)
Q Consensus 301 ~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~~~---~---------------------~~~~---~d~~~la~~t~g~s 353 (647)
T Consensus 500 sAV~D--Ride~veFpLPGeEERfkll~lYlnkyi~~~~~~~~~~~~~~lfkk~sQ~i~l~~~~t~~~~~EaAkkTeGfS 577 (630)
T KOG0742 500 SAVND--RIDEVVEFPLPGEEERFKLLNLYLNKYILKPATSGKPGKWSHLFKKESQRIKLAGFDTGRKCSEAAKKTEGFS 577 (630)
T ss_pred HHHHH--HHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCC
T ss_conf 67876--5554130689977899999999999981477777897215577764401554434318889999998606875
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999999876455320
Q gi|254780545|r 354 GADLRNLVNEAALMAARRN 372 (647)
Q Consensus 354 gAdi~~~~~eAa~~a~r~~ 372 (647)
T Consensus 578 GREiakLv--a~vQAavYg 594 (630)
T KOG0742 578 GREIAKLV--ASVQAAVYG 594 (630)
T ss_pred HHHHHHHH--HHHHHHHHC
T ss_conf 78999999--998898850