HHsearch alignment for GI: 254780545 and conserved domain: KOG1942
>KOG1942 consensus.
Probab=99.03 E-value=1.6e-08 Score=80.72 Aligned_cols=72 Identities=39% Similarity=0.556 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCC--CCEECCCHHHHHHHHHHC
Q ss_conf 988985288999999999874335676642012333110037874258889999742469--970205857886444203
Q gi|254780545|r 147 FKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEAN--VPFFTISGSDFVELFVGV 224 (647)
Q Consensus 147 f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~--~~f~~~~~s~~~~~~~g~ 224 (647)
T Consensus 37 ~~g~vGQ~~AReAagiivdlik~----Kkm---aGravLlaGppgtGKTAlAlaisqELG~kvPFcpmvgSEvyS~EvKK 109 (456)
T KOG1942 37 AAGFVGQENAREAAGIIVDLIKS----KKM---AGRAVLLAGPPGTGKTALALAISQELGPKVPFCPMVGSEVYSNEVKK 109 (456)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHH----HHC---CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 44511526666551089999986----632---67279973699876568999999974799985666410555434557
Q ss_pred C
Q ss_conf 3
Q gi|254780545|r 225 G 225 (647)
Q Consensus 225 g 225 (647)
T Consensus 110 T 110 (456)
T KOG1942 110 T 110 (456)
T ss_pred H
T ss_conf 8