HHsearch alignment for GI: 254780545 and conserved domain: KOG2028
>KOG2028 consensus.
Probab=99.51 E-value=4.1e-13 Score=113.86 Aligned_cols=207 Identities=29% Similarity=0.440 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCC---EECCCHHHHHHHH
Q ss_conf 5698898528899999999987433567664201233311003787425888999974246997---0205857886444
Q gi|254780545|r 145 VTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVP---FFTISGSDFVELF 221 (647)
Q Consensus 145 v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~---f~~~~~s~~~~~~ 221 (647)
T Consensus 135 ktL~dyvGQ~hlv~q~gllrs~ieq--------~~ip-SmIlWGppG~GKTtlArlia~tsk~~SyrfvelSAt~----- 200 (554)
T KOG2028 135 KTLDDYVGQSHLVGQDGLLRSLIEQ--------NRIP-SMILWGPPGTGKTTLARLIASTSKKHSYRFVELSATN----- 200 (554)
T ss_pred CHHHHHCCHHHHCCCCHHHHHHHHC--------CCCC-CEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCC-----
T ss_conf 3687750534414832689999870--------8887-0588669987658899999860577742799974145-----
Q ss_pred HHCCHHHHHHHHHHHHHH-----CCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEC--C
Q ss_conf 203324599999999873-----780120632356414455789886268898899899853032357782999962--9
Q gi|254780545|r 222 VGVGASRVRDMFEQAKNN-----SPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAAT--N 294 (647)
Q Consensus 222 ~g~g~~~vr~lf~~a~~~-----~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aT--n 294 (647)
T Consensus 201 --a~t~dvR~ife~aq~~~~l~krkTilFiDEiHRFNksQQ-------D-------~fLP~----VE~G~I~lIGATTEN 260 (554)
T KOG2028 201 --AKTNDVRDIFEQAQNEKSLTKRKTILFIDEIHRFNKSQQ-------D-------TFLPH----VENGDITLIGATTEN 260 (554)
T ss_pred --CCHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHH-------H-------CCCCE----ECCCCEEEEECCCCC
T ss_conf --661889999999887876524406987377655323211-------0-------03421----306706998536689
Q ss_pred CCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHC----------CCCCC----CCCCHHHHHHHHHCCCHHHHHHH
Q ss_conf 81008833316564231410001347889999999854----------88777----32110245441203798999999
Q gi|254780545|r 295 RPDVLDAALLRPGRFDRQITVPNPDIVGREHILMVHSR----------NVPLA----PNVILKTIARGTPGFSGADLRNL 360 (647)
Q Consensus 295 ~~~~lD~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~----------~~~~~----~~~d~~~la~~t~g~sgAdi~~~ 360 (647)
T Consensus 261 PSFqln~aLlS--RC-~VfvLekL~~n~v~~iL~raia~l~dser~~~~l~n~s~~ve~siidyla~lsdGDaR~aLN~L 337 (554)
T KOG2028 261 PSFQLNAALLS--RC-RVFVLEKLPVNAVVTILMRAIASLGDSERPTDPLPNSSMFVEDSIIDYLAYLSDGDARAALNAL 337 (554)
T ss_pred CCCCHHHHHHH--CC-CEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 76011277873--16-0667336888999999999987632102568899983124568899999870473188887789
Q ss_pred HHHHHHHHHHHH---CCCCCHHHHHHHHHHC
Q ss_conf 999876455320---2421045689997501
Q gi|254780545|r 361 VNEAALMAARRN---RRLVTMQEFEDAKDKI 388 (647)
Q Consensus 361 ~~eAa~~a~r~~---~~~i~~~dl~~A~~rv 388 (647)
T Consensus 338 ems~~m~~tr~g~~~~~~lSidDvke~lq~s 368 (554)
T KOG2028 338 EMSLSMFCTRSGQSSRVLLSIDDVKEGLQRS 368 (554)
T ss_pred HHHHHHHHHHCCCCCCCEECHHHHHHHHHHC
T ss_conf 9999988752477656400288899998531