HHsearch alignment for GI: 254780545 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=99.55 E-value=2.6e-13 Score=115.27 Aligned_cols=219 Identities=25% Similarity=0.317 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCC-----CCCEECCCHHH-------
Q ss_conf 898528899999999987433567664201233311003787425888999974246-----99702058578-------
Q gi|254780545|r 149 DVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEA-----NVPFFTISGSD------- 216 (647)
Q Consensus 149 dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~-----~~~f~~~~~s~------- 216 (647)
T Consensus 31 ~l~~Re~---Ei~~l~~~l~~~l-----~g~~~~n~~I~G~pGTGKT~~vk~v~~~l~~~~~~~~~vyINc~~~~t~~~i 102 (394)
T PRK00411 31 NLPHREE---QIEELAFALRPAL-----RGSRPSNVLILGPPGTGKTTTVKKVFEELEEAALKVVYVYINCQIDRTRYAI 102 (394)
T ss_pred CCCCHHH---HHHHHHHHHHHHH-----CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
T ss_conf 8988599---9999999999997-----5999984799889999899999999999997468965999969668989999
Q ss_pred HHHHH---HHCCH-H---HHHHHHHHHH-----HHCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 86444---20332-4---5999999998-----73780120632356414455789886268898899899853032357
Q gi|254780545|r 217 FVELF---VGVGA-S---RVRDMFEQAK-----NNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESS 284 (647)
Q Consensus 217 ~~~~~---~g~g~-~---~vr~lf~~a~-----~~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~ 284 (647)
T Consensus 103 ~~~i~~~L~~~~~p~~G~s~~~~~~~l~~~l~~~~~~~ivvLDEiD~L~~~~~~----------~vLY~L~r~~~~-~~~ 171 (394)
T PRK00411 103 LSEIARSLFGHPPPSSGLSFDELFDKIAEYLDERDRVLIVALDDINYLVEKEGN----------DVLYSLLRAHEE-YPG 171 (394)
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC----------HHHHHHHHCCCC-CCC
T ss_conf 999999956998987787899999999998616697589999655402036650----------899999854022-688
Q ss_pred CCEEEEEECCCC---CCCCHHHCCCCCC-CCEEEECHHHHHHHHHHHHHHHCCC----CCCCCCCHHHHHHHHHCCCHHH
Q ss_conf 782999962981---0088333165642-3141000134788999999985488----7773211024544120379899
Q gi|254780545|r 285 EGVILIAATNRP---DVLDAALLRPGRF-DRQITVPNPDIVGREHILMVHSRNV----PLAPNVILKTIARGTPGFSGAD 356 (647)
Q Consensus 285 ~~v~vi~aTn~~---~~lD~al~RpgRf-d~~i~~~~P~~~~r~~i~~~~~~~~----~~~~~~d~~~la~~t~g~sgAd 356 (647)
T Consensus 172 ~~~~vI~IsN~~~~~~~Ldprv~S--~l~~~~i~F~PY~~~qL~~IL~~R~~~af~~gv~~~~-~i~~~A~~~a~~~G-D 247 (394)
T PRK00411 172 ARIGVIGISSDLTFLYILDPRVKS--VFGPEEIVFPPYTADEIFDILKDRVEEGFYPGVVSDE-VLELIADLTGREHG-D 247 (394)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHC--CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHH-HHHHHHHHHHHCCC-C
T ss_conf 738999997687177664077750--2786289858999899999999999841455678978-99999999855047-5
Q ss_pred HH---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 99---99999876455320242104568999750136
Q gi|254780545|r 357 LR---NLVNEAALMAARRNRRLVTMQEFEDAKDKILM 390 (647)
Q Consensus 357 i~---~~~~eAa~~a~r~~~~~i~~~dl~~A~~rv~~ 390 (647)
T Consensus 248 aR~Aldllr~A~e~Ae~~g~~~Vt~~hV~~A~~~~~~ 284 (394)
T PRK00411 248 ARVAIDLLRRAGEIAEREGSRKVTEEDVRKAYEKSEP 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
T ss_conf 8999999999999999718996589999999998600