HHsearch alignment for GI: 254780545 and conserved domain: PRK02496

Probab=97.06  E-value=0.0027  Score=42.88  Aligned_cols=118  Identities=27%  Similarity=0.358  Sum_probs=57.5

Q ss_pred             CCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCC
Q ss_conf             31100378742588899997424699702058578864442033245999999998737801206323564144557898
Q gi|254780545|r  182 HGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLG  261 (647)
Q Consensus       182 ~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~  261 (647)
T Consensus         2 ~riillG~PGSGKgTqa~~L~~~~~~~h--is~GdllR~~~~~~s~-------lg~~i~~---~i~--------~G~-l-   59 (185)
T PRK02496          2 ARLIFLGPPGAGKGTQAVVLAEHLQIPH--ISTGDILRQAITEQTP-------LGIKAQG---YVD--------SGE-L-   59 (185)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHCCEE--ECHHHHHHHHHHCCCH-------HHHHHHH---HHH--------CCC-C-
T ss_conf             1899979999998999999999969977--8888999999874998-------8999999---998--------799-6-


Q ss_pred             CCCHHHHHHHHHHHH-HHCCCCCCCCEEEEEECCCCCCCCHH------HCCCC-CCCCEEEECHHHHHHHHHHHH
Q ss_conf             862688988998998-53032357782999962981008833------31656-423141000134788999999
Q gi|254780545|r  262 GGNDEREQTLNQLLV-EMDGFESSEGVILIAATNRPDVLDAA------LLRPG-RFDRQITVPNPDIVGREHILM  328 (647)
Q Consensus       262 ~~~~e~~~~ln~ll~-~mdg~~~~~~v~vi~aTn~~~~lD~a------l~Rpg-Rfd~~i~~~~P~~~~r~~i~~  328 (647)
T Consensus        60 vp-d---~iv~~li~~~l~~~~~~~g~ilD---GfPR~~~Qa~~l~~~l~~~~~~~~~vi~l~~~~~~~~~Rl~~  127 (185)
T PRK02496         60 VP-D---QLVLGLVQERLQQPDAANGWILD---GFPRNVTQAAFLDELLQEINQSGDRVVNLDVPDDVIVERLLA  127 (185)
T ss_pred             CC-C---HHHHHHHHHHHHCCCCCCCEEEE---CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHC
T ss_conf             77-2---88999999998484533877886---898857889999999997056730333304999999999874