HHsearch alignment for GI: 254780545 and conserved domain: PRK04328

Probab=96.91  E-value=0.00078  Score=46.73  Aligned_cols=29  Identities=45%  Similarity=0.724  Sum_probs=22.5

Q ss_pred             HHCCCCCC--EEECCCCCHHHHHHHHHHHCC
Q ss_conf             20123331--100378742588899997424
Q gi|254780545|r  176 LGGRIPHG--VLLVGPPGTGKTLLARAVAGE  204 (647)
Q Consensus       176 ~g~~~p~g--~ll~GppGtGKTlla~a~a~e  204 (647)
T Consensus        17 L~GGlp~gs~~Lv~G~pGtGKT~la~qFl~~   47 (250)
T PRK04328         17 LYGGIPERNVVLLSGGPGTGKSIFSQQFLWN   47 (250)
T ss_pred             CCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
T ss_conf             1599879969999828999989999999999