HHsearch alignment for GI: 254780545 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.42 E-value=1.3e-11 Score=103.09 Aligned_cols=203 Identities=25% Similarity=0.320 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCC-----------
Q ss_conf 569889852889999999998743356766420123331100378742588899997424699702058-----------
Q gi|254780545|r 145 VTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTIS----------- 213 (647)
Q Consensus 145 v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~----------- 213 (647)
T Consensus 14 ~~F~dvVGQ~~vv~~L~nai~-----------~~ri~HAyLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C~~C~ 82 (462)
T PRK06305 14 QTFSEILGQDAVVTVLKNALR-----------FNRAAHAYLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQCAICK 82 (462)
T ss_pred CCHHHHCCCHHHHHHHHHHHH-----------CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 987660490999999999998-----------499762343038998599999999999967999988889887668889
Q ss_pred ------HHHHHHHHH--HCCHHHHHHHHHHHHHHCC-----HHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf ------578864442--0332459999999987378-----012063235641445578988626889889989985303
Q gi|254780545|r 214 ------GSDFVELFV--GVGASRVRDMFEQAKNNSP-----CIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDG 280 (647)
Q Consensus 214 ------~s~~~~~~~--g~g~~~vr~lf~~a~~~~p-----~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg 280 (647)
T Consensus 83 ~I~~g~~~DViEiDaAs~~gVddIRel~e~v~-~~P~~~~yKVyIIDEvhmLs--------------~~AfNALLKtLE- 146 (462)
T PRK06305 83 EISSGTSLDVIEIDGASHRGIEDIRQINETVL-FTPSKSQYKIYIIDEVHMLT--------------KEAFNSLLKTLE- 146 (462)
T ss_pred HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHC-CCCCCCCEEEEEEECHHHCC--------------HHHHHHHHHHHH-
T ss_conf 98638999868643553446689999997710-08867750599981521179--------------999999999861-
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHC-CCCCCCCEEEECHHHHHHHHHHHHHHH--CCCCCCCCCCHHHHHHHHHCCCHHHH
Q ss_conf 235778299996298100883331-656423141000134788999999985--48877732110245441203798999
Q gi|254780545|r 281 FESSEGVILIAATNRPDVLDAALL-RPGRFDRQITVPNPDIVGREHILMVHS--RNVPLAPNVILKTIARGTPGFSGADL 357 (647)
Q Consensus 281 ~~~~~~v~vi~aTn~~~~lD~al~-RpgRfd~~i~~~~P~~~~r~~i~~~~~--~~~~~~~~~d~~~la~~t~g~sgAdi 357 (647)
T Consensus 147 -EPP~~v~FILaTTe~~KIp~TIlSRCQrf~F~-~i~~~~I~~~---L~~I~~~E~i~~e~~-AL~lIA~~a~G-smRDA 219 (462)
T PRK06305 147 -EPPQHVKFFLATTEIHKIPGTILSRCQKMHLK-RIPEETIIDK---LALIAQQDGIETSRE-ALLPIARAAQG-SLRDA 219 (462)
T ss_pred -CCCCCEEEEEEECCHHHCCHHHHHHHHEEECC-CCCHHHHHHH---HHHHHHHCCCCCCHH-HHHHHHHHCCC-CHHHH
T ss_conf -89877499998188142854787654023325-7999999999---999999839985999-99999998589-58789
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 9999998764553202421045689997
Q gi|254780545|r 358 RNLVNEAALMAARRNRRLVTMQEFEDAK 385 (647)
Q Consensus 358 ~~~~~eAa~~a~r~~~~~i~~~dl~~A~ 385 (647)
T Consensus 220 lslLDQ~i~----~~~~~it~~~V~~~l 243 (462)
T PRK06305 220 ESLYDYVVG----LFPKSLSPDTVAKAL 243 (462)
T ss_pred HHHHHHHHH----HCCCCCCHHHHHHHH
T ss_conf 999999998----479986899999986