HHsearch alignment for GI: 254780545 and conserved domain: PRK06526

Probab=98.32  E-value=1.5e-06  Score=66.34  Aligned_cols=100  Identities=23%  Similarity=0.371  Sum_probs=61.4

Q ss_pred             CCCEEECCCCCHHHHHHHHHHHCCC---CCCEECCCHHHHHHHHHH-CCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCC
Q ss_conf             3311003787425888999974246---997020585788644420-332459999999987378012063235641445
Q gi|254780545|r  181 PHGVLLVGPPGTGKTLLARAVAGEA---NVPFFTISGSDFVELFVG-VGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHR  256 (647)
Q Consensus       181 p~g~ll~GppGtGKTlla~a~a~e~---~~~f~~~~~s~~~~~~~g-~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r  256 (647)
T Consensus        98 ~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~a~~~g~~~~~~~~--l~~~dLLIiDe~g~~~~--  173 (254)
T PRK06526         98 KENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFATAAQWVARLAAAHHAGRLQDELVK--LGRIPLLIVDEVGYIPF--  173 (254)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHH--HHCCCEEEEECCCCCCC--
T ss_conf             88789989999868999999999999869967998779999999998855809999998--51368776502136447--


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
Q ss_conf             5789886268898899899853032357782999962981
Q gi|254780545|r  257 GIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRP  296 (647)
Q Consensus       257 ~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~  296 (647)
T Consensus       174 -------~~~---~a~~lf~li~~Rye~~S-~Ii-TSn~~  201 (254)
T PRK06526        174 -------EAE---AANLFFQLVSSRYERAS-LIV-TSNKP  201 (254)
T ss_pred             -------CHH---HHHHHHHHHHHHHCCCC-EEE-ECCCC
T ss_conf             -------889---99999999999974588-676-65898