HHsearch alignment for GI: 254780545 and conserved domain: PRK06921

Probab=98.30  E-value=6.6e-06  Score=61.73  Aligned_cols=102  Identities=18%  Similarity=0.279  Sum_probs=58.7

Q ss_pred             CCCEEECCCCCHHHHHHHHHHHCCC----CCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHH--HHHHC
Q ss_conf             3311003787425888999974246----99702058578864442033245999999998737801206323--56414
Q gi|254780545|r  181 PHGVLLVGPPGTGKTLLARAVAGEA----NVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEI--DAVGR  254 (647)
Q Consensus       181 p~g~ll~GppGtGKTlla~a~a~e~----~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~~p~iifiDei--da~~~  254 (647)
T Consensus       116 ~~~l~f~G~~G~GKThLa~aIa~~Ll~~~~~~Vly~~~~~~~~~lk~~-~~~~~~~l~~~-~~~d-lLIIDDLfk~~~G~  192 (265)
T PRK06921        116 KNSIALLGQPGSGKTHLLTAAANELMRKKGVPVLYFPFVEGFGDLKDD-FDLLEAKLNRM-KKVE-VLFIDDLFKPVNGK  192 (265)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHH-HHHHHHHHHHH-HCCC-EEEEECCCCCCCCC
T ss_conf             662799728989889999999999999629719998879999999988-88899999986-3299-99982212234798


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf             45578988626889889989985303235778299996298
Q gi|254780545|r  255 HRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNR  295 (647)
Q Consensus       255 ~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~  295 (647)
T Consensus       193 e~~------te---~~~~~lf~iIN~-Ry~~~kptIiSSNl  223 (265)
T PRK06921        193 PRA------TE---WQIEQTYSVVNY-RYLNHKPILISSEL  223 (265)
T ss_pred             CCC------CH---HHHHHHHHHHHH-HHHCCCCEEEECCC
T ss_conf             789------88---999999999999-99769998998689