HHsearch alignment for GI: 254780545 and conserved domain: PRK07270
>PRK07270 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.50 E-value=5e-13 Score=113.25 Aligned_cols=204 Identities=27% Similarity=0.437 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEE-------CC-----
Q ss_conf 569889852889999999998743356766420123331100378742588899997424699702-------05-----
Q gi|254780545|r 145 VTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFF-------TI----- 212 (647)
Q Consensus 145 v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~-------~~----- 212 (647)
T Consensus 12 ~~F~dvvGQe~i~~~L~nal~-----------~~ri~HAyLF~GP~GtGKts~ArifAkaLnC~~~~~~~pC~~C~~C~~ 80 (557)
T PRK07270 12 QTFDEMVGQEVVATTLKQAVE-----------SGKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEPCNNCDICRD 80 (557)
T ss_pred CCHHHHCCHHHHHHHHHHHHH-----------CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 987671481999999999998-----------599540442108998689999999999957999899998887779999
Q ss_pred ----CHHHHHHHHH--HCCHHHHHHHHHHHHHHCC-----HHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf ----8578864442--0332459999999987378-----0120632356414455789886268898899899853032
Q gi|254780545|r 213 ----SGSDFVELFV--GVGASRVRDMFEQAKNNSP-----CIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGF 281 (647)
Q Consensus 213 ----~~s~~~~~~~--g~g~~~vr~lf~~a~~~~p-----~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~ 281 (647)
T Consensus 81 i~~g~~~DviEidaas~~gVd~IRei~~~~-~~~P~~~~yKV~IIDEah~Ls--------------~~A~NALLKtLE-- 143 (557)
T PRK07270 81 ITNGSLEDVIEIDAASNNGVDEIRDIRDKS-TYAPSRATYKVYIIDEVHMLS--------------TGAFNALLKTLE-- 143 (557)
T ss_pred HHCCCCCCEEEECCCCCCCHHHHHHHHHHH-CCCCCCCCEEEEEECCHHHCC--------------HHHHHHHHHHHH--
T ss_conf 875899974873477767889999999984-238777883899971445349--------------999998999852--
Q ss_pred CCCCCEEEEEECCCCCCCCHHHC-CCCCCCCEEEECHHHHHHHHH-HHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHH
Q ss_conf 35778299996298100883331-656423141000134788999-9999854887773211024544120379899999
Q gi|254780545|r 282 ESSEGVILIAATNRPDVLDAALL-RPGRFDRQITVPNPDIVGREH-ILMVHSRNVPLAPNVILKTIARGTPGFSGADLRN 359 (647)
Q Consensus 282 ~~~~~v~vi~aTn~~~~lD~al~-RpgRfd~~i~~~~P~~~~r~~-i~~~~~~~~~~~~~~d~~~la~~t~g~sgAdi~~ 359 (647)
T Consensus 144 EPP~~~vFIL~Ttep~kIl~TI~SRCQrf~F~-~i~~~~i~~~L~~I~~--~E~i~~~~~-aL~~Ia~~a~G-~mRdAls 218 (557)
T PRK07270 144 EPTENVVFILATTELHKIPATILSRVQRFEFK-SIKTKAIREHLAWILD--KEGISFEVE-ALNLIARRAEG-GMRDALS 218 (557)
T ss_pred CCCCCEEEEEEECCHHHCCHHHHHHHHHCCCC-CCCHHHHHHHHHHHHH--HCCCCCCHH-HHHHHHHHCCC-CHHHHHH
T ss_conf 89987699998499475928887430001088-8999999999999999--839986999-99999997799-6878999
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 9999876455320242104568999
Q gi|254780545|r 360 LVNEAALMAARRNRRLVTMQEFEDA 384 (647)
Q Consensus 360 ~~~eAa~~a~r~~~~~i~~~dl~~A 384 (647)
T Consensus 219 iLdQ~~s~---~~~~~it~~~v~~~ 240 (557)
T PRK07270 219 ILDQALSL---SQDNQVTIAIAEEI 240 (557)
T ss_pred HHHHHHHC---CCCCCCCHHHHHHH
T ss_conf 99999971---79997679999999