HHsearch alignment for GI: 254780545 and conserved domain: PRK07993
>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=98.11 E-value=2.4e-05 Score=57.66 Aligned_cols=134 Identities=22% Similarity=0.268 Sum_probs=92.5
Q ss_pred CCCCCCEEECCCCCHHHHHHHHHHHCCCCC-------C---------EECCCHHHHHHHHH---H--CCHHHHHHHHHHH
Q ss_conf 123331100378742588899997424699-------7---------02058578864442---0--3324599999999
Q gi|254780545|r 178 GRIPHGVLLVGPPGTGKTLLARAVAGEANV-------P---------FFTISGSDFVELFV---G--VGASRVRDMFEQA 236 (647)
Q Consensus 178 ~~~p~g~ll~GppGtGKTlla~a~a~e~~~-------~---------f~~~~~s~~~~~~~---g--~g~~~vr~lf~~a 236 (647)
T Consensus 21 ~rl~HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~~C~l~~~~~HPD~~~i~pe~~~~~I~IdqIR~l~~~~ 100 (334)
T PRK07993 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLTPEKGKSSLGVDAVREVTEKL 100 (334)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 98104675479999889999999999981899999999999978999866899984775342234559999999999998
Q ss_pred HHH----CCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCE
Q ss_conf 873----7801206323564144557898862688988998998530323577829999629810088333165642314
Q gi|254780545|r 237 KNN----SPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDVLDAALLRPGRFDRQ 312 (647)
Q Consensus 237 ~~~----~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~lD~al~RpgRfd~~ 312 (647)
T Consensus 101 ~~~~~~g~~kV~iI~~Ae~mn--------------~~AaNaLLKtLE--EPp~~t~~iL~t~~~~~lLpTI~S--RC-q~ 161 (334)
T PRK07993 101 YEHARLGGAKVVWLPDAALLT--------------DAAANALLKTLE--EPPEKTWFFLACREPARLLATLRS--RC-RL 161 (334)
T ss_pred HHCCCCCCCEEEEECCHHHHC--------------HHHHHHHHHHHC--CCCCCEEEEEECCCHHHCCCHHHH--HC-CC
T ss_conf 436656994799976677759--------------999999998612--799884999866985657238875--23-04
Q ss_pred EEECHHHHHHHHHHHHHH
Q ss_conf 100013478899999998
Q gi|254780545|r 313 ITVPNPDIVGREHILMVH 330 (647)
Q Consensus 313 i~~~~P~~~~r~~i~~~~ 330 (647)
T Consensus 162 ~~~~~~~~~~~~~wL~~~ 179 (334)
T PRK07993 162 HYLAPPPEQYALTWLSRE 179 (334)
T ss_pred CCCCCCCHHHHHHHHHHH
T ss_conf 158997999999999873