HHsearch alignment for GI: 254780545 and conserved domain: PRK08118

Probab=96.91  E-value=0.00077  Score=46.78  Aligned_cols=101  Identities=22%  Similarity=0.320  Sum_probs=64.2

Q ss_pred             CCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCC
Q ss_conf             31100378742588899997424699702058578864442033245999999998737801206323564144557898
Q gi|254780545|r  182 HGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLG  261 (647)
Q Consensus       182 ~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~  261 (647)
T Consensus         2 ~rI~IiG~~GsGKSTlAr~L~~~~~ip~~~LD~-----l~w~~~w~-----------~~---------------------   44 (167)
T PRK08118          2 KKIILIGSGGSGKSTLARQLGEKLNIPVHHLDA-----LFWKPNWE-----------GV---------------------   44 (167)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCEEECCC-----EEECCCCC-----------CC---------------------
T ss_conf             679998899987999999999988969796443-----47668994-----------68---------------------


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHC
Q ss_conf             86268898899899853032357782999962981008833316564231410001347889999999854
Q gi|254780545|r  262 GGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDVLDAALLRPGRFDRQITVPNPDIVGREHILMVHSR  332 (647)
Q Consensus       262 ~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~lD~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~  332 (647)
T Consensus        45 -~~~e~~~~~~~~~~-------~~~WIidG--ny~~~~~~r~~---~aD~iI~Ld~p~~~~~~r~~kR~~~  102 (167)
T PRK08118         45 -PKEEQRTVQNELVK-------EDEWIIDG--NYGGTMDIRLN---AADTIIFLDIPRTICLYRAFKRRVQ  102 (167)
T ss_pred             -CHHHHHHHHHHHHH-------CCCEEEEC--CCHHHHHHHHH---HCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf             -88999999999983-------89879947--71779987797---6999999859899999999999999