HHsearch alignment for GI: 254780545 and conserved domain: PRK08691
>PRK08691 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.06 E-value=7.9e-10 Score=90.10 Aligned_cols=185 Identities=28% Similarity=0.444 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECC-----CH------
Q ss_conf 6988985288999999999874335676642012333110037874258889999742469970205-----85------
Q gi|254780545|r 146 TFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTI-----SG------ 214 (647)
Q Consensus 146 ~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~-----~~------ 214 (647)
T Consensus 14 ~F~e~vGQ~~v~~~L~nal~~-----------~rl~haylf~G~rGvGKTt~Ari~Ak~lNC~~~~~~~pCg~C~~C~~i 82 (704)
T PRK08691 14 TFADLVGQEHVVKALQNALDE-----------GRLHHAYLLTGTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQI 82 (704)
T ss_pred CHHHHCCCHHHHHHHHHHHHH-----------CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 475641869999999999981-----------997523750278987888999999999679999999978777767878
Q ss_pred -----HHHHHHHH--HCCHHHHHHHHHHHHHHCCH-----HEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf -----78864442--03324599999999873780-----1206323564144557898862688988998998530323
Q gi|254780545|r 215 -----SDFVELFV--GVGASRVRDMFEQAKNNSPC-----IVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFE 282 (647)
Q Consensus 215 -----s~~~~~~~--g~g~~~vr~lf~~a~~~~p~-----iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~ 282 (647)
T Consensus 83 ~~g~~~D~~EiDaAs~~~vdd~R~l~~~~-~y~P~~~~yKVyiiDEvhmLs--------------~~afNAlLKtLE--E 145 (704)
T PRK08691 83 DAGRYVDLLEIDAASNTGIDNIREVLENA-QYAPTAGKYKVYIIDEVHMLS--------------KSAFNAMLKTLE--E 145 (704)
T ss_pred HCCCCCCEEEEECCCCCCHHHHHHHHHHC-CCCCCCCCEEEEEEECHHHCC--------------HHHHHHHHHHHC--C
T ss_conf 55899874774245445889999999853-468867853599983154438--------------999999998614--7
Q ss_pred CCCCEEEEEECCCCCCCCHHHC-CCCCCCCEEEECHHHHHHHHHHHHHHH--CCCCCCCCCCHHHHHHHHHCCCHHHHHH
Q ss_conf 5778299996298100883331-656423141000134788999999985--4887773211024544120379899999
Q gi|254780545|r 283 SSEGVILIAATNRPDVLDAALL-RPGRFDRQITVPNPDIVGREHILMVHS--RNVPLAPNVILKTIARGTPGFSGADLRN 359 (647)
Q Consensus 283 ~~~~v~vi~aTn~~~~lD~al~-RpgRfd~~i~~~~P~~~~r~~i~~~~~--~~~~~~~~~d~~~la~~t~g~sgAdi~~ 359 (647)
T Consensus 146 PP~~v~FilaTTdp~Klp~TIlSRC~~f~l~~-~~~~~i~~~---L~~i~~~E~i~~e~~-al~~ia~~a~G-s~RDals 219 (704)
T PRK08691 146 PPEHVKFILATTDPHKVPVTVLSRCLQFVLRN-MTAQQVADH---LAHVLDSEKIAYEPP-ALQLLGRAAAG-SMRDALS 219 (704)
T ss_pred CCCCEEEEEECCCHHHCCHHHHHHHHHHCCCC-CCHHHHHHH---HHHHHHHCCCCCCHH-HHHHHHHHCCC-CHHHHHH
T ss_conf 97560899854884647589998887710268-999999999---999999839856899-99999997578-5777988
Q ss_pred HHHHH
Q ss_conf 99998
Q gi|254780545|r 360 LVNEA 364 (647)
Q Consensus 360 ~~~eA 364 (647)
T Consensus 220 lldQa 224 (704)
T PRK08691 220 LLDQA 224 (704)
T ss_pred HHHHH
T ss_conf 99999