HHsearch alignment for GI: 254780545 and conserved domain: PRK12377

Probab=98.18  E-value=1.6e-06  Score=66.13  Aligned_cols=132  Identities=18%  Similarity=0.205  Sum_probs=72.2

Q ss_pred             CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCC---CCCEECCCHHHHH
Q ss_conf             2256988985-28899999999987433567664201233311003787425888999974246---9970205857886
Q gi|254780545|r  143 GSVTFKDVAG-VDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEA---NVPFFTISGSDFV  218 (647)
Q Consensus       143 ~~v~f~dv~g-~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~---~~~f~~~~~s~~~  218 (647)
T Consensus        69 ~~~~f~ny~~~~~~~~~a~~~a~~~~~---~F----~~~~~NlIf~G~pGtGKTHLA~AIg~~a~~~G~sVlF~t~~dLv  141 (248)
T PRK12377         69 RKCSFANYQVQNDGQRYALSQAKSIAD---EL----MTGCTNFVFSGKPGTGKNHLAAAIGNRLLAKGRSVIVVTVPDVM  141 (248)
T ss_pred             HCCCCCCCCCCCHHHHHHHHHHHHHHH---HH----HCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHH
T ss_conf             438634564578789999999999999---87----31886089989999878899999999999879969998899999


Q ss_pred             HHHHHCCHH-HH-HHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
Q ss_conf             444203324-59-9999999873780120632356414455789886268898899899853032357782999962981
Q gi|254780545|r  219 ELFVGVGAS-RV-RDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRP  296 (647)
Q Consensus       219 ~~~~g~g~~-~v-r~lf~~a~~~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~  296 (647)
T Consensus       142 ~~L~~a~~~g~~~~k~l~~--l~~~dLLIIDElG~~---~~s------~~~~~llfqlI~~R--y~~~ks~Ii--TTNL~  206 (248)
T PRK12377        142 SRLHESYDNGQSGEKFLQE--LCKVDLLVLDEIGIQ---RET------KNEQVVLNQIIDRR--TASMRSVGM--LTNLN  206 (248)
T ss_pred             HHHHHHHHCCCCHHHHHHH--HHCCCEEEEHHCCCC---CCC------HHHHHHHHHHHHHH--HHCCCCEEE--ECCCC
T ss_conf             9999999848509999999--733898986000578---898------67999999999999--855798689--75899