HHsearch alignment for GI: 254780545 and conserved domain: TIGR03608
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=96.64 E-value=0.015 Score=37.39 Aligned_cols=30 Identities=33% Similarity=0.470 Sum_probs=19.9
Q ss_pred HHCCCCCC--EEECCCCCHHHHHHHHHHHCCC
Q ss_conf 20123331--1003787425888999974246
Q gi|254780545|r 176 LGGRIPHG--VLLVGPPGTGKTLLARAVAGEA 205 (647)
Q Consensus 176 ~g~~~p~g--~ll~GppGtGKTlla~a~a~e~ 205 (647)
T Consensus 17 vsl~i~~Ge~~~i~GpSGsGKSTLL~~i~gl~ 48 (206)
T TIGR03608 17 LNLTIEKGKMVAIVGESGSGKSTLLNIIGLLE 48 (206)
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 07798699899998799970999999997599