HHsearch alignment for GI: 254780545 and conserved domain: cd03227
>cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport. These families are characterised by the fact that the ABC subunit is made up of duplicated, fused ABC modules (ABC2). No known transmembrane proteins or domains are associated with these proteins.
Probab=96.88 E-value=0.0015 Score=44.70 Aligned_cols=116 Identities=19% Similarity=0.287 Sum_probs=59.7
Q ss_pred HHHHHCCCCCC--EEECCCCCHHHHHHHHHHHCCCC-------CCEECCC----HHH---HHHHHHH--CCHH---HHHH
Q ss_conf 66420123331--10037874258889999742469-------9702058----578---8644420--3324---5999
Q gi|254780545|r 173 FKRLGGRIPHG--VLLVGPPGTGKTLLARAVAGEAN-------VPFFTIS----GSD---FVELFVG--VGAS---RVRD 231 (647)
Q Consensus 173 ~~~~g~~~p~g--~ll~GppGtGKTlla~a~a~e~~-------~~f~~~~----~s~---~~~~~~g--~g~~---~vr~ 231 (647)
T Consensus 11 ~vpndi~l~~g~~~iItGpN~sGKSt~Lr~i~l~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lSgg~~~~~~l~~ 90 (162)
T cd03227 11 FVPNDVTFGEGSLTIITGPNGSGKSTILDAIGLALGGAQSATRRRSGVKAGCIVAAVSAELIFTRLQLSGGEKELSALAL 90 (162)
T ss_pred EECCCEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHEEEEEECCCCCCCCHHHHHHHHH
T ss_conf 50770260898689998998775799999999999986326775255542776402305766412000542999999999
Q ss_pred HHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHH
Q ss_conf 99999873780120632356414455789886268898899899853032357782999962981008833
Q gi|254780545|r 232 MFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDVLDAA 302 (647)
Q Consensus 232 lf~~a~~~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~lD~a 302 (647)
T Consensus 91 ~l~~~~~~~~~lillDE~~~-----Gtd----~~~~~-~l~~~i~~~--~~--~~~~~i~tTH~~eL~~la 147 (162)
T cd03227 91 ILALASLKPRPLYILDEIDR-----GLD----PRDGQ-ALAEAILEH--LV--KGAQVIVITHLPELAELA 147 (162)
T ss_pred HHHHCCCCCCCEEEECCCCC-----CCC----HHHHH-HHHHHHHHH--HH--CCCEEEEECCHHHHHHHH
T ss_conf 99854248984899636557-----999----88999-999999999--97--699899979739999998