HHsearch alignment for GI: 254780545 and conserved domain: pfam00154

>pfam00154 RecA recA bacterial DNA recombination protein. RecA is a DNA-dependent ATPase and functions in DNA repair systems. RecA protein catalyses an ATP-dependent DNA strand-exchange reaction that is the central step in the repair of dsDNA breaks by homologous recombination.

Probab=95.97  E-value=0.013  Score=37.85  Aligned_cols=27  Identities=44%  Similarity=0.804  Sum_probs=21.4

Q ss_pred             HH-CCCCCC--EEECCCCCHHHHHHHHHHH
Q ss_conf             20-123331--1003787425888999974
Q gi|254780545|r  176 LG-GRIPHG--VLLVGPPGTGKTLLARAVA  202 (647)
Q Consensus       176 ~g-~~~p~g--~ll~GppGtGKTlla~a~a  202 (647)
T Consensus        44 Lg~GGlP~GRi~ei~G~essGKTtlal~~i   73 (322)
T pfam00154        44 LGIGGLPKGRIIEIYGPESSGKTTLALHAI   73 (322)
T ss_pred             HCCCCCCCCEEEEEECCCCCCHHHHHHHHH
T ss_conf             758997787089998898777899999999