HHsearch alignment for GI: 254780545 and conserved domain: pfam05272

>pfam05272 VirE Virulence-associated protein E. This family contains several bacterial virulence-associated protein E like proteins.
Probab=95.82  E-value=0.023  Score=36.08  Aligned_cols=143  Identities=26%  Similarity=0.432  Sum_probs=76.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHH
Q ss_conf             2256988985288999999999-874-33567664201233311003787425888999974246997020585788644
Q gi|254780545|r  143 GSVTFKDVAGVDEAKEDLQEIV-DFL-CDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVEL  220 (647)
Q Consensus       143 ~~v~f~dv~g~~~~k~~~~~~v-~~l-~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~  220 (647)
T Consensus        13 i~~l~~~~~g~~d~~~-~~~~~~~wligaVaR~~~pG~k~d~vlvL~G~QG~gKStf~~~L~~~----~~~d~~~~~---   84 (198)
T pfam05272        13 IETLFIDYLGAEDSLY-TREVSKLFLIGAVARVYEPGCKFDHVLILQGAQGSGKSTFLKKLGGE----WFTDSIRSF---   84 (198)
T ss_pred             HHHHHHHHCCCCCHHH-HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH----HCCCCCCCC---
T ss_conf             9999999629997599-99999999999999997789767767899889867899999997377----515655576---


Q ss_pred             HHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH-HHCCCCCC---------CCEEEE
Q ss_conf             42033245999999998737801206323564144557898862688988998998-53032357---------782999
Q gi|254780545|r  221 FVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLV-EMDGFESS---------EGVILI  290 (647)
Q Consensus       221 ~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~-~mdg~~~~---------~~v~vi  290 (647)
T Consensus        85 -------~~kD~~~~l~~~--wi~el~El~~~~k-~---------~~~-~lK~fls~~~d~~R~pY~~~~~~~pR~~vfi  144 (198)
T pfam05272        85 -------EGKDAYEKLQGV--WIVEIAELDGFSK-A---------EVE-AIKAFITRTVDSFRAPYGRRAESFPRQCVFV  144 (198)
T ss_pred             -------CCCHHHHHHHHH--HHHHHHHHHHCCH-H---------HHH-HHHHHHCCHHHCCHHCCCCCCEECCEEEEEE
T ss_conf             -------773899999987--8732598751365-3---------299-9999845413123102235640065479999


Q ss_pred             EECCCCCC-CCHHHCCCCCCCCEEEEC
Q ss_conf             96298100-883331656423141000
Q gi|254780545|r  291 AATNRPDV-LDAALLRPGRFDRQITVP  316 (647)
Q Consensus       291 ~aTn~~~~-lD~al~RpgRfd~~i~~~  316 (647)
T Consensus       145 gTtN~~~~L~D~TGnR--RF~-pi~v~  168 (198)
T pfam05272       145 GTTNRDEFLKDPTGNR--RFW-PVKVG  168 (198)
T ss_pred             EECCCCCCCCCCCCCE--EEE-EEEEC
T ss_conf             9638876557999981--689-99968