HHsearch alignment for GI: 254780545 and conserved domain: pfam10236

>pfam10236 DAP3 Mitochondrial ribosomal death-associated protein 3. This is a family of conserved proteins which were originally described as death-associated-protein-3 (DAP-3). The proteins carry a P-loop DNA-binding motif, and induce apoptosis. DAP3 has been shown to be a pro-apoptotic factor in the mitochondrial matrix and to be crucial for mitochondrial biogenesis and so has also been designated as MRP-S29 (mitochondrial ribosomal protein subunit 29).

Probab=96.61  E-value=0.07  Score=32.60  Aligned_cols=42  Identities=29%  Similarity=0.392  Sum_probs=28.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHH-HHHHHHC
Q ss_conf             9999999987433567664201233311003787425888-9999742
Q gi|254780545|r  157 KEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTL-LARAVAG  203 (647)
Q Consensus       157 k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTl-la~a~a~  203 (647)
T Consensus         4 R~~tlel~~~l~~~-----~~~~~~~r~vL~G~~GsGKS~~L~q~v~~   46 (274)
T pfam10236         4 REETLELTKKLKEA-----DASKKVVRFVLTGERGSGKSVLLAQAMAY   46 (274)
T ss_pred             CHHHHHHHHHHHHH-----CCCCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf             15899999999874-----04799518998897997799999999999