HHsearch alignment for GI: 254780545 and conserved domain: smart00350

Probab=98.23  E-value=1.3e-05  Score=59.56  Aligned_cols=165  Identities=24%  Similarity=0.312  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCH
Q ss_conf             89852889999999998743356766420123--3311003787425888999974246997020585788644420332
Q gi|254780545|r  149 DVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRI--PHGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVELFVGVGA  226 (647)
Q Consensus       149 dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~--p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~~g~g~  226 (647)
T Consensus       204 ~I~G~~~vK~allL--~L~GG~~~~~~~g~~~Rg~ihiLLvGDPGtgKSqlLk~~~~iaprsvy-tsG~g--sS~aGLTa  278 (509)
T smart00350      204 SIYGHEDIKKAILL--LLFGGVHKNLPDGMKIRGDINILLLGDPGTAKSQLLKYVEKTAPRAVY-TTGKG--SSAVGLTA  278 (509)
T ss_pred             CCCCCHHHHHHHHH--HHCCCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHCCCEEE-EECCC--CCCCCCEE
T ss_conf             32387889999999--970887664898850415414998469982362999999985886068-73444--55577068


Q ss_pred             HHHHHHHH-----HHHH---HCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC---------CCCC--CCCE
Q ss_conf             45999999-----9987---37801206323564144557898862688988998998530---------3235--7782
Q gi|254780545|r  227 SRVRDMFE-----QAKN---NSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMD---------GFES--SEGV  287 (647)
Q Consensus       227 ~~vr~lf~-----~a~~---~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~md---------g~~~--~~~v  287 (647)
T Consensus       279 av~rd~~~ge~~leaGALVlAD~GiccIDEfdKm~~----------~----dr~alhEaMEQQtisiaKaGi~~tL~aR~  344 (509)
T smart00350      279 AVTRDPETREFTLEGGALVLADNGVCCIDEFDKMDD----------S----DRTAIHEAMEQQTISIAKAGITTTLNARC  344 (509)
T ss_pred             EEEECCCCCCEEECCCCEECCCCCEEEEEEHHHCCH----------H----HHHHHHHHHHHCEEEEECCCEEEEEECCC
T ss_conf             999817888378725641205675478521320787----------7----89999999974877874375179985573


Q ss_pred             EEEEECCCC-------------CCCCHHHCCCCCCCCEEEE-CHHHHHHH----HHHHHHHHCCC
Q ss_conf             999962981-------------0088333165642314100-01347889----99999985488
Q gi|254780545|r  288 ILIAATNRP-------------DVLDAALLRPGRFDRQITV-PNPDIVGR----EHILMVHSRNV  334 (647)
Q Consensus       288 ~vi~aTn~~-------------~~lD~al~RpgRfd~~i~~-~~P~~~~r----~~i~~~~~~~~  334 (647)
T Consensus       345 sVlAAaNP~~g~yd~~~s~~eni~l~~~LLS--RFDLIf~l~D~~~~~~D~~ia~hil~~h~~~~  407 (509)
T smart00350      345 SVLAAANPIGGRYDPKLTPEENIDLPAPILS--RFDLLFVVLDEVDEERDRELAKHVVDLHRYSH  407 (509)
T ss_pred             EEEEEECCCCCCCCCCCCHHHHCCCCHHHHH--HCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             5998655655637888999994689803541--02389996158987889999999999874158