HHsearch alignment for GI: 254780545 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=99.44 E-value=5.3e-13 Score=113.06 Aligned_cols=130 Identities=35% Similarity=0.458 Sum_probs=95.5
Q ss_pred CCCEEECCCCCHHHHHHHHHHHCCCCCC---EECCCHHHHHHHH--------------HHCCHHHHHHHHHHHHHHCCHH
Q ss_conf 3311003787425888999974246997---0205857886444--------------2033245999999998737801
Q gi|254780545|r 181 PHGVLLVGPPGTGKTLLARAVAGEANVP---FFTISGSDFVELF--------------VGVGASRVRDMFEQAKNNSPCI 243 (647)
Q Consensus 181 p~g~ll~GppGtGKTlla~a~a~e~~~~---f~~~~~s~~~~~~--------------~g~g~~~vr~lf~~a~~~~p~i 243 (647)
T Consensus 2 ~~~ill~G~~GsGKTtl~~~la~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 81 (148)
T smart00382 2 GEVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLALALARKLKPDV 81 (148)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 97899999997029999999998726689968998759989888987653000112210519999999999998449989
Q ss_pred EEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEECHHH
Q ss_conf 2063235641445578988626889889989985303235778299996298100883331656423141000134
Q gi|254780545|r 244 VFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDVLDAALLRPGRFDRQITVPNPD 319 (647)
Q Consensus 244 ifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~lD~al~RpgRfd~~i~~~~P~ 319 (647)
T Consensus 82 iiiDei~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~vi~~~n~~~~~~~~~~~~-~~~~~~~~~~~~ 148 (148)
T smart00382 82 LILDEITSLLDAEQEAL--------LLLLEELRLLLLLKSEKNLTVILTTNDEKDLGPALLRR-RFDRRIVLLLIL 148 (148)
T ss_pred EEEECCHHHCCCCCHHH--------HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHCC-CCCEEEEEECCC
T ss_conf 99827502147620799--------99999999851765789989999569952249877074-478799982879