RPSBLAST alignment for GI: 254780545 and conserved domain: COG1222
>gnl|CDD|31415 COG1222, RPT1, ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones]. Length = 406
Score = 286 bits (733), Expect = 1e-77
Identities = 118/258 (45%), Positives = 174/258 (67%), Gaps = 1/258 (0%)
Query: 141 NVGSVTFKDVAGVDEAKEDLQEIVDF-LCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLAR 199
VT++D+ G+DE ++++E+V+ L +P+ F+ LG P GVLL GPPGTGKTLLA+
Sbjct: 144 EKPDVTYEDIGGLDEQIQEIREVVELPLKNPELFEELGIDPPKGVLLYGPPGTGKTLLAK 203
Query: 200 AVAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIG 259
AVA + + F + GS+ V+ ++G GA VR++FE A+ +P I+F+DEIDA+G R
Sbjct: 204 AVANQTDATFIRVVGSELVQKYIGEGARLVRELFELAREKAPSIIFIDEIDAIGAKRFDS 263
Query: 260 LGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDVLDAALLRPGRFDRQITVPNPD 319
G+ E ++T+ +LL ++DGF+ V +I ATNRPD+LD ALLRPGRFDR+I P PD
Sbjct: 264 GTSGDREVQRTMLELLNQLDGFDPRGNVKVIMATNRPDILDPALLRPGRFDRKIEFPLPD 323
Query: 320 IVGREHILMVHSRNVPLAPNVILKTIARGTPGFSGADLRNLVNEAALMAARRNRRLVTMQ 379
GR IL +H+R + LA +V L+ +AR T GFSGADL+ + EA + A R R VTM+
Sbjct: 324 EEGRAEILKIHTRKMNLADDVDLELLARLTEGFSGADLKAICTEAGMFAIRERRDEVTME 383
Query: 380 EFEDAKDKILMGAERRST 397
+F A +K++ ++ S+
Sbjct: 384 DFLKAVEKVVKKKKKLSS 401