HHsearch alignment for GI: 254780546 and conserved domain: COG0171
>COG0171 NadE NAD synthase [Coenzyme metabolism].
Probab=98.10 E-value=0.00012 Score=51.86 Aligned_cols=156 Identities=17% Similarity=0.147 Sum_probs=95.2
Q ss_pred HHHHHHH-HC--CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCE
Q ss_conf 9999998-52--79983999966942489999999999986489972999999667798784689999999998718988
Q gi|254780546|r 8 SVRFFVR-SL--VYPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIAH 84 (423)
Q Consensus 8 ~~~~~~~-~l--~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~~ 84 (423)
T Consensus 11 ~~v~fl~~~l~~~~~k~~VlGiSGGiDSa~~~~La~~A~~~-~~~~~~~~av~mP~~~~--~~~~~~da~~~~~~lg~~~ 87 (268)
T COG0171 11 RLVDFLRDYLKKAGFKGVVLGLSGGIDSALVLALAVRALGK-GDSKENVLAVRLPYGYT--VQADEEDAQDLAEALGIDY 87 (268)
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCC-CCCHHHEEEEECCCCCC--CCCCHHHHHHHHHHHCCCE
T ss_conf 99999999999739998699766681999999999998565-65124326686788776--5347999999999829966
Q ss_pred EEEEEECC---------CCC-------CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99997504---------787-------78037888545555432001234420123456665668999986236544433
Q gi|254780546|r 85 SVVSWKNS---------KPQ-------TGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGM 148 (423)
Q Consensus 85 ~~~~~~~~---------~~~-------~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~ 148 (423)
T Consensus 88 ~~i~I~~~v~~~~~~~~~~~~~~~~~~~~~~NikaR~Rm~~lY~~An~~~~lVlGTgn~sE----~-----~~Gy~Tk-- 156 (268)
T COG0171 88 KEINIKPAVDAFLKKLLKLFLGIYLEDLALGNIKARLRMVILYAIANKLGGLVLGTGNKSE----L-----ALGYFTK-- 156 (268)
T ss_pred EEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHH----H-----HCCCEEC--
T ss_conf 9975288899988766665234421127776450999999999998555978975884877----8-----6074432--
Q ss_pred CCCCCCCCCCCCCCCEEECCHHCCCHHHHHHHHHHHCCC
Q ss_conf 223576410035796871012104289999989981893
Q gi|254780546|r 149 GLSGMCDTILYDLNLWISRPFLRCRREDIRSFLLQRNIS 187 (423)
Q Consensus 149 ~l~~~~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~i~ 187 (423)
T Consensus 157 ----------yGDg~~d~~Pi~~L~KtqV~~La~~l~ip 185 (268)
T COG0171 157 ----------YGDGAVDINPIADLYKTQVYALARHLGIP 185 (268)
T ss_pred ----------CCCCCCCHHHHCCCCHHHHHHHHHHCCCC
T ss_conf ----------06764470541487589999999873999