HHsearch alignment for GI: 254780546 and conserved domain: COG0301
>COG0301 ThiI Thiamine biosynthesis ATP pyrophosphatase [Coenzyme metabolism].
Probab=98.14 E-value=6.3e-05 Score=53.85 Aligned_cols=145 Identities=13% Similarity=0.107 Sum_probs=93.5
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHH-HHHHHH----HHHHCCCCEEEEEEE--
Q ss_conf 9983999966942489999999999986489972999999667798784689-999999----998718988999975--
Q gi|254780546|r 18 YPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDE-VRYVSD----VCSRLRIAHSVVSWK-- 90 (423)
Q Consensus 18 ~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e-~~~v~~----~~~~lgi~~~~~~~~-- 90 (423)
T Consensus 174 t~Gk~l~LlSGGIDSPVA~~l~mk----R---G~~v~~v~f~~--~p~~~~~a~~k~~~l~~~~~~~~~~~~~~~~v~f~ 244 (383)
T COG0301 174 TQGKVLLLLSGGIDSPVAAWLMMK----R---GVEVIPVHFGN--PPYTSEKAREKVVALALLRLTSYGGKVRLYVVPFT 244 (383)
T ss_pred CCCCEEEEEECCCCHHHHHHHHHH----C---CCEEEEEEECC--CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHH
T ss_conf 677489997078774999999985----6---98779999727--99851889999999986430246872289997629
Q ss_pred -------CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -------0478778037888545555432001234420123456665668999986236544433223576410035796
Q gi|254780546|r 91 -------NSKPQTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTILYDLNL 163 (423)
Q Consensus 91 -------~~~~~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~~~~~~ 163 (423)
T Consensus 245 ~v~~~i~~~~~~~y~~v~~rR~M~riA~~iae~~g~~aIvtGEsLGQVASQTl~nL~~i---------------~~~t~~ 309 (383)
T COG0301 245 EVQEEILEKVPESYRCVLLKRMMYRIAEKLAEEFGAKAIVTGESLGQVASQTLENLRVI---------------DSVTNT 309 (383)
T ss_pred HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHH---------------HHCCCC
T ss_conf 99999986367530204789999999999999839839983686104667678889999---------------815587
Q ss_pred EEECCHHCCCHHHHHHHHHHHCC
Q ss_conf 87101210428999998998189
Q gi|254780546|r 164 WISRPFLRCRREDIRSFLLQRNI 186 (423)
Q Consensus 164 ~i~RPLL~~~r~~l~~~~~~~~i 186 (423)
T Consensus 310 pIlRPLI~~DK~eIi~~Ar~IgT 332 (383)
T COG0301 310 PVLRPLIGLDKEEIIEIARRIGT 332 (383)
T ss_pred CEECCCCCCCHHHHHHHHHHHCC
T ss_conf 42314457998999999998297