HHsearch alignment for GI: 254780546 and conserved domain: PRK01565
>PRK01565 thiamine biosynthesis protein ThiI; Provisional.
Probab=98.45 E-value=5.3e-06 Score=61.45 Aligned_cols=146 Identities=21% Similarity=0.200 Sum_probs=95.4
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH---HHHC--CCCEEEEEEECC
Q ss_conf 99839999669424899999999999864899729999996677987846899999999---9871--898899997504
Q gi|254780546|r 18 YPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDV---CSRL--RIAHSVVSWKNS 92 (423)
Q Consensus 18 ~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~---~~~l--gi~~~~~~~~~~ 92 (423)
T Consensus 175 t~Gk~l~LlSGGIDSPVAa~~mmk----R---G~~v~~v~f~-~~p~t~~~a~~kv~~l~~~L~~y~~~~kl~~v~f~~~ 246 (399)
T PRK01565 175 TSGKALLLLSGGIDSPVAGYLAMK----R---GVEIEAVHFH-SPPYTSERAKEKVIDLARILAKYGGRIKLHVVPFTEI 246 (399)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHH----C---CCEEEEEEEE-CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf 778579986178753999999985----5---9879999986-8998778999999999999997288855999663999
Q ss_pred -------CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf -------7877803788854555543200123442012345666566899998623654443322357641003579687
Q gi|254780546|r 93 -------KPQTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTILYDLNLWI 165 (423)
Q Consensus 93 -------~~~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~~~~~~~i 165 (423)
T Consensus 247 ~~~i~~~~~~~~~~vl~RR~M~riA~~iA~~~~~~alvTGESLGQVASQTl~Nl~~i~---------------~~~~~pV 311 (399)
T PRK01565 247 QEEIKKKVPESYLMTLMRRFMMRIADKIAEKRGALAIVTGESLGQVASQTLESMQAIN---------------AVTNLPV 311 (399)
T ss_pred HHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHH---------------HHCCCCC
T ss_conf 9999860880038599999999999999998599789824135567675567788887---------------5217754
Q ss_pred ECCHHCCCHHHHHHHHHHHCC
Q ss_conf 101210428999998998189
Q gi|254780546|r 166 SRPFLRCRREDIRSFLLQRNI 186 (423)
Q Consensus 166 ~RPLL~~~r~~l~~~~~~~~i 186 (423)
T Consensus 312 lRPLIg~DK~EII~~Ar~IGT 332 (399)
T PRK01565 312 LRPLIGMDKEEIIEIAKEIGT 332 (399)
T ss_pred CCCCCCCCHHHHHHHHHHCCC
T ss_conf 466557898999999987096