HHsearch alignment for GI: 254780546 and conserved domain: PRK08384
>PRK08384 thiamine biosynthesis protein ThiI; Provisional.
Probab=97.66 E-value=0.00094 Score=45.57 Aligned_cols=130 Identities=9% Similarity=0.057 Sum_probs=81.2
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
Q ss_conf 99839999669424899999999999864899729999996677987846899999999987189889999750478778
Q gi|254780546|r 18 YPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIAHSVVSWKNSKPQTG 97 (423)
Q Consensus 18 ~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~~~~~~~~~~~~~~~ 97 (423)
T Consensus 178 s~Gk~l~LlSGGi-SPVAa~~mmK----R---G~~v~~vhf~~~--~~~~~kv~~l~~~L~~y~~~~~~~~~~~-~---~ 243 (310)
T PRK08384 178 TQGKMVGLLSDEL-SAVAIFLMMK----R---GVEVIPVHIGMG--EKNLEKVRKLWNQLKKYSYGSKGRLVVV-K---N 243 (310)
T ss_pred CCCCEEEEECCCC-CHHHHHHHHH----C---CCEEEEEEECCC--HHHHHHHHHHHHHHHHHCCCCCEEEEEE-C---H
T ss_conf 7884899953886-3999999985----6---987999985688--7899999999999998679984699996-6---5
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHCCCHHHH
Q ss_conf 03788854555543200123442012345666566899998623654443322357641003579687101210428999
Q gi|254780546|r 98 LMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTILYDLNLWISRPFLRCRREDI 177 (423)
Q Consensus 98 ~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~~~~~~~i~RPLL~~~r~~l 177 (423)
T Consensus 244 ---------~~~a~~ia~~~~~~alvTGEsLGQVASQTl~nl~~i---------------~~~~~~PVlRPLIg~DK~EI 299 (310)
T PRK08384 244 ---------FERVNKIIRDFGAKGVVKGLRPEQLASETLENIYED---------------SRMFDVPVYYPLIALPDEYI 299 (310)
T ss_pred ---------HHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH---------------HHCCCCCCCCCCCCCCHHHH
T ss_conf ---------999999999859989997741255454579889999---------------73048873038568998999
Q ss_pred HHHHHHHC
Q ss_conf 99899818
Q gi|254780546|r 178 RSFLLQRN 185 (423)
Q Consensus 178 ~~~~~~~~ 185 (423)
T Consensus 300 I~~Ar~IG 307 (310)
T PRK08384 300 EKVKEKIG 307 (310)
T ss_pred HHHHHHCC
T ss_conf 99998638